RNA–Protein interactions for RNA: ENST00000247225.6

SGPP1-201, Transcript of sphingosine-1-phosphate phosphatase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SGPP1, Length 3,312 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGPP1-201ENST00000247225 STAMBPL1Q96FJ0 436 aa18.23■□□□□ 0.51
SGPP1-201ENST00000247225 DDX23Q9BUQ8 820 aaKnown RBP18.23■□□□□ 0.51
SGPP1-201ENST00000247225 VEZTQ9HBM0 779 aa18.23■□□□□ 0.51
SGPP1-201ENST00000247225 FGFR1OP2Q9NVK5 253 aa18.23■□□□□ 0.51
SGPP1-201ENST00000247225 BZW2Q9Y6E2 419 aaKnown RBP18.23■□□□□ 0.51
SGPP1-201ENST00000247225 UTRNP46939 3433 aa18.23■□□□□ 0.51
SGPP1-201ENST00000247225 PARP4Q9UKK3 1724 aaKnown RBP18.23■□□□□ 0.51
SGPP1-201ENST00000247225 HLA-DOAP06340 250 aa18.23■□□□□ 0.51
SGPP1-201ENST00000247225 PEX19P40855 299 aa18.23■□□□□ 0.51
SGPP1-201ENST00000247225 SWT1Q5T5J6 900 aaKnown RBP18.23■□□□□ 0.51
SGPP1-201ENST00000247225 RUBCNQ92622 972 aa18.23■□□□□ 0.51
SGPP1-201ENST00000247225 SGSM3Q96HU1 749 aa18.23■□□□□ 0.51
SGPP1-201ENST00000247225 ERP44Q9BS26 406 aa18.23■□□□□ 0.51
SGPP1-201ENST00000247225 HEMGNQ9BXL5 484 aa18.23■□□□□ 0.51
SGPP1-201ENST00000247225 ZC3H12CQ9C0D7 883 aaKnown RBP18.23■□□□□ 0.51
SGPP1-201ENST00000247225 DBNDD1Q9H9R9 158 aa18.23■□□□□ 0.51
SGPP1-201ENST00000247225 TRIM33Q9UPN9 1127 aa18.23■□□□□ 0.51
SGPP1-201ENST00000247225 UBR2Q8IWV8 1755 aa18.22■□□□□ 0.51
SGPP1-201ENST00000247225 FERP16591 822 aa18.22■□□□□ 0.51
SGPP1-201ENST00000247225 SOX5P35711 763 aa18.22■□□□□ 0.51
SGPP1-201ENST00000247225 KIAA1755Q5JYT7 1200 aa18.22■□□□□ 0.51
SGPP1-201ENST00000247225 EIF2AK1Q9BQI3 630 aaKnown RBP18.22■□□□□ 0.51
SGPP1-201ENST00000247225 WDR3Q9UNX4 943 aaKnown RBP eCLIP18.22■□□□□ 0.51
SGPP1-201ENST00000247225 DLATP10515 647 aaKnown RBP18.22■□□□□ 0.51
SGPP1-201ENST00000247225 LRIG3Q6UXM1 1119 aa18.22■□□□□ 0.51
SGPP1-201ENST00000247225 FRMD5Q7Z6J6 570 aa18.22■□□□□ 0.51
SGPP1-201ENST00000247225 ATG4AQ8WYN0 398 aa18.22■□□□□ 0.51
SGPP1-201ENST00000247225 COG5Q9UP83 839 aa18.22■□□□□ 0.51
SGPP1-201ENST00000247225 SPATA31A1Q5TZJ5 1347 aa18.22■□□□□ 0.51
SGPP1-201ENST00000247225 ESYT2A0FGR8 921 aa18.21■□□□□ 0.51
SGPP1-201ENST00000247225 TCP11X1B4DZS4 312 aa18.21■□□□□ 0.51
SGPP1-201ENST00000247225 ANKRD63C9JTQ0 380 aa18.21■□□□□ 0.51
SGPP1-201ENST00000247225 RASGRF2O14827 1237 aa18.21■□□□□ 0.51
SGPP1-201ENST00000247225 DRD4P21917 467 aa18.21■□□□□ 0.51
SGPP1-201ENST00000247225 ELF1P32519 619 aa18.21■□□□□ 0.51
SGPP1-201ENST00000247225 PSMC2P35998 433 aaKnown RBP18.21■□□□□ 0.51
SGPP1-201ENST00000247225 RPL21P46778 160 aaKnown RBP18.21■□□□□ 0.51
SGPP1-201ENST00000247225 CCDC137Q6PK04 289 aaKnown RBP18.21■□□□□ 0.51
SGPP1-201ENST00000247225 PRUNE1Q86TP1 453 aa18.21■□□□□ 0.51
SGPP1-201ENST00000247225 SORBS3O60504 671 aa18.21■□□□□ 0.51
SGPP1-201ENST00000247225 RPS6KA4O75676 772 aa18.21■□□□□ 0.51
SGPP1-201ENST00000247225 MYBL1P10243 752 aa18.21■□□□□ 0.51
SGPP1-201ENST00000247225 DLG4P78352 724 aa18.21■□□□□ 0.51
SGPP1-201ENST00000247225 TATDN2Q93075 761 aa18.21■□□□□ 0.51
SGPP1-201ENST00000247225 TMEM59LQ9UK28 342 aa18.21■□□□□ 0.51
SGPP1-201ENST00000247225 ABCB11O95342 1321 aa18.21■□□□□ 0.51
SGPP1-201ENST00000247225 CASZ1Q86V15 1759 aa18.21■□□□□ 0.51
SGPP1-201ENST00000247225 CCT8L1PA6NM43 557 aa18.21■□□□□ 0.51
SGPP1-201ENST00000247225 A8MUI8 341 aa18.21■□□□□ 0.51
SGPP1-201ENST00000247225 SPATA31C1P0DKV0 1188 aa18.21■□□□□ 0.51
SGPP1-201ENST00000247225 KCNJ2P63252 427 aa18.21■□□□□ 0.51
SGPP1-201ENST00000247225 MYL7Q01449 175 aa18.21■□□□□ 0.51
SGPP1-201ENST00000247225 SEMA3FQ13275 785 aa18.21■□□□□ 0.51
SGPP1-201ENST00000247225 SLF2Q8IX21 1173 aa18.21■□□□□ 0.51
SGPP1-201ENST00000247225 RPUSD2Q8IZ73 545 aaKnown RBP18.21■□□□□ 0.51
SGPP1-201ENST00000247225 YY1AP1Q9H869 796 aa18.21■□□□□ 0.51
SGPP1-201ENST00000247225 TYW1Q9NV66 732 aaKnown RBP18.21■□□□□ 0.51
SGPP1-201ENST00000247225 SUCLA2Q9P2R7 463 aaPredicted RBP18.21■□□□□ 0.51
SGPP1-201ENST00000247225 MTRF1LQ9UGC7 380 aaKnown RBP18.21■□□□□ 0.51
SGPP1-201ENST00000247225 SWAP70Q9UH65 585 aa18.21■□□□□ 0.51
SGPP1-201ENST00000247225 BARGINQ6ZT62 677 aa18.2■□□□□ 0.5
SGPP1-201ENST00000247225 FAM228AQ86W67 206 aa18.2■□□□□ 0.5
SGPP1-201ENST00000247225 RFFLQ8WZ73 363 aa18.2■□□□□ 0.5
SGPP1-201ENST00000247225 INTS2Q9H0H0 1204 aaKnown RBP18.2■□□□□ 0.5
SGPP1-201ENST00000247225 RASAL2Q9UJF2 1139 aa18.2■□□□□ 0.5
SGPP1-201ENST00000247225 ASTN1O14525 1302 aa18.2■□□□□ 0.5
SGPP1-201ENST00000247225 MSH4O15457 936 aa18.2■□□□□ 0.5
SGPP1-201ENST00000247225 RASSF9O75901 435 aa18.2■□□□□ 0.5
SGPP1-201ENST00000247225 COMTP21964 271 aa18.2■□□□□ 0.5
SGPP1-201ENST00000247225 PAX7P23759 505 aa18.2■□□□□ 0.5
SGPP1-201ENST00000247225 FMO5P49326 533 aa18.2■□□□□ 0.5
SGPP1-201ENST00000247225 CERKLQ49MI3 558 aaPredicted RBP18.2■□□□□ 0.5
SGPP1-201ENST00000247225 ZSWIM2Q8NEG5 633 aa18.2■□□□□ 0.5
SGPP1-201ENST00000247225 FAM167BQ9BTA0 163 aa18.2■□□□□ 0.5
SGPP1-201ENST00000247225 SLITRK6Q9H5Y7 841 aa18.2■□□□□ 0.5
SGPP1-201ENST00000247225 NOD2Q9HC29 1040 aa18.2■□□□□ 0.5
SGPP1-201ENST00000247225 SCAF8Q9UPN6 1271 aaKnown RBP18.2■□□□□ 0.5
SGPP1-201ENST00000247225 SNED1Q8TER0 1413 aa18.2■□□□□ 0.5
SGPP1-201ENST00000247225 CCDC169A6NNP5 214 aa18.2■□□□□ 0.5
SGPP1-201ENST00000247225 EDRF1Q3B7T1 1238 aa18.2■□□□□ 0.5
SGPP1-201ENST00000247225 FAM182AQ5T1J6 154 aa18.2■□□□□ 0.5
SGPP1-201ENST00000247225 SEL1L2Q5TEA6 688 aa18.2■□□□□ 0.5
SGPP1-201ENST00000247225 CYP4F22Q6NT55 531 aa18.2■□□□□ 0.5
SGPP1-201ENST00000247225 C6orf89Q6UWU4 347 aa18.2■□□□□ 0.5
SGPP1-201ENST00000247225 FBXO11Q86XK2 927 aa18.2■□□□□ 0.5
SGPP1-201ENST00000247225 CCDC50Q8IVM0 306 aa18.2■□□□□ 0.5
SGPP1-201ENST00000247225 SIX2Q9NPC8 291 aa18.2■□□□□ 0.5
SGPP1-201ENST00000247225 TMEM150BA6NC51 233 aa18.19■□□□□ 0.5
SGPP1-201ENST00000247225 CALCOCO2Q13137 446 aa18.19■□□□□ 0.5
SGPP1-201ENST00000247225 BYSLQ13895 437 aaKnown RBP18.19■□□□□ 0.5
SGPP1-201ENST00000247225 COBLL1Q53SF7 1204 aa18.19■□□□□ 0.5
SGPP1-201ENST00000247225 TRIM68Q6AZZ1 485 aa18.19■□□□□ 0.5
SGPP1-201ENST00000247225 ACTR5Q9H9F9 607 aaPredicted RBP18.19■□□□□ 0.5
SGPP1-201ENST00000247225 MYH14Q7Z406 1995 aaKnown RBP18.19■□□□□ 0.5
SGPP1-201ENST00000247225 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP18.19■□□□□ 0.5
SGPP1-201ENST00000247225 CLDN3O15551 220 aa18.19■□□□□ 0.5
SGPP1-201ENST00000247225 UBOX5O94941 541 aa18.19■□□□□ 0.5
SGPP1-201ENST00000247225 GCFC2P16383 781 aaKnown RBP18.19■□□□□ 0.5
SGPP1-201ENST00000247225 SP4Q02446 784 aa18.19■□□□□ 0.5
SGPP1-201ENST00000247225 SLFN12Q8IYM2 578 aa18.19■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 59.5 ms