RNA–Protein interactions for RNA: ENST00000244302.8

HIF3A-201, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

TSL 1 (best)

Gene HIF3A, Length 2,101 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-201ENST00000244302 ARL2P36404 184 aa14.2□□□□□ -0.14
HIF3A-201ENST00000244302 TBC1D8BQ0IIM8 1120 aa14.2□□□□□ -0.14
HIF3A-201ENST00000244302 SYCP1Q15431 976 aa14.2□□□□□ -0.14
HIF3A-201ENST00000244302 BMT2Q1RMZ1 405 aa14.2□□□□□ -0.14
HIF3A-201ENST00000244302 MARCH8Q5T0T0 291 aa14.2□□□□□ -0.14
HIF3A-201ENST00000244302 TMC6Q7Z403 805 aa14.2□□□□□ -0.14
HIF3A-201ENST00000244302 RDH13Q8NBN7 331 aa14.2□□□□□ -0.14
HIF3A-201ENST00000244302 SLC7A3Q8WY07 619 aa14.2□□□□□ -0.14
HIF3A-201ENST00000244302 DRC1Q96MC2 740 aa14.2□□□□□ -0.14
HIF3A-201ENST00000244302 KMT5AQ9NQR1 393 aa14.2□□□□□ -0.14
HIF3A-201ENST00000244302 EVPLQ92817 2033 aa14.2□□□□□ -0.14
HIF3A-201ENST00000244302 A0A1B0GTH6 734 aa14.2□□□□□ -0.14
HIF3A-201ENST00000244302 BICDL2A1A5D9 508 aa14.2□□□□□ -0.14
HIF3A-201ENST00000244302 DENND3A2RUS2 1198 aa14.2□□□□□ -0.14
HIF3A-201ENST00000244302 AKAP3O75969 853 aa14.2□□□□□ -0.14
HIF3A-201ENST00000244302 SRGAP2CP0DJJ0 459 aa14.2□□□□□ -0.14
HIF3A-201ENST00000244302 NR2F2P24468 414 aa14.2□□□□□ -0.14
HIF3A-201ENST00000244302 KLRC1P26715 233 aa14.2□□□□□ -0.14
HIF3A-201ENST00000244302 KLK7P49862 253 aa14.2□□□□□ -0.14
HIF3A-201ENST00000244302 COPB1P53618 953 aaKnown RBP14.2□□□□□ -0.14
HIF3A-201ENST00000244302 NCKAP1LP55160 1127 aa14.2□□□□□ -0.14
HIF3A-201ENST00000244302 LRMPQ12912 555 aa14.2□□□□□ -0.14
HIF3A-201ENST00000244302 KIF22Q14807 665 aa14.2□□□□□ -0.14
HIF3A-201ENST00000244302 DGKDQ16760 1214 aa14.2□□□□□ -0.14
HIF3A-201ENST00000244302 EFCAB12Q6NXP0 572 aa14.2□□□□□ -0.14
HIF3A-201ENST00000244302 MRFAP1L1Q96HT8 127 aa14.2□□□□□ -0.14
HIF3A-201ENST00000244302 CBWD1Q9BRT8 395 aa14.2□□□□□ -0.14
HIF3A-201ENST00000244302 CFHR5Q9BXR6 569 aa14.2□□□□□ -0.14
HIF3A-201ENST00000244302 LIMA1Q9UHB6 759 aaKnown RBP14.2□□□□□ -0.14
HIF3A-201ENST00000244302 ARID2Q68CP9 1835 aa14.19□□□□□ -0.14
HIF3A-201ENST00000244302 LRRC10BA6NIK2 292 aa14.19□□□□□ -0.14
HIF3A-201ENST00000244302 TULP1O00294 542 aaPredicted RBP14.19□□□□□ -0.14
HIF3A-201ENST00000244302 CTIFO43310 598 aaKnown RBP14.19□□□□□ -0.14
HIF3A-201ENST00000244302 ADCY3O60266 1144 aa14.19□□□□□ -0.14
HIF3A-201ENST00000244302 MYL3P08590 195 aa14.19□□□□□ -0.14
HIF3A-201ENST00000244302 C6orf222P0C671 652 aaPredicted RBP14.19□□□□□ -0.14
HIF3A-201ENST00000244302 GTF2BQ00403 316 aa14.19□□□□□ -0.14
HIF3A-201ENST00000244302 CAPSQ13938 189 aa14.19□□□□□ -0.14
HIF3A-201ENST00000244302 MIIPQ5JXC2 388 aa14.19□□□□□ -0.14
HIF3A-201ENST00000244302 REM2Q8IYK8 340 aaPredicted RBP14.19□□□□□ -0.14
HIF3A-201ENST00000244302 ZNF710Q8N1W2 664 aa14.19□□□□□ -0.14
HIF3A-201ENST00000244302 MCPH1Q8NEM0 835 aa14.19□□□□□ -0.14
HIF3A-201ENST00000244302 THAP9Q9H5L6 903 aa14.19□□□□□ -0.14
HIF3A-201ENST00000244302 SEL1LQ9UBV2 794 aa14.19□□□□□ -0.14
HIF3A-201ENST00000244302 LRRIQ4A6NIV6 560 aa14.18□□□□□ -0.14
HIF3A-201ENST00000244302 RNF225M0QZC1 329 aaPredicted RBP14.18□□□□□ -0.14
HIF3A-201ENST00000244302 PES1O00541 588 aaKnown RBP14.18□□□□□ -0.14
HIF3A-201ENST00000244302 N4BP3O15049 544 aa14.18□□□□□ -0.14
HIF3A-201ENST00000244302 HBP1O60381 514 aa14.18□□□□□ -0.14
HIF3A-201ENST00000244302 C22orf31O95567 290 aa14.18□□□□□ -0.14
HIF3A-201ENST00000244302 NR3C1P04150 777 aa14.18□□□□□ -0.14
HIF3A-201ENST00000244302 HOXD8P13378 290 aaPredicted RBP14.18□□□□□ -0.14
HIF3A-201ENST00000244302 ADSSP30520 456 aa14.18□□□□□ -0.14
HIF3A-201ENST00000244302 CYP2J2P51589 502 aa14.18□□□□□ -0.14
HIF3A-201ENST00000244302 FKBP3Q00688 224 aaKnown RBP14.18□□□□□ -0.14
HIF3A-201ENST00000244302 LRRC63Q05C16 580 aa14.18□□□□□ -0.14
HIF3A-201ENST00000244302 DMP1Q13316 513 aaPredicted RBP14.18□□□□□ -0.14
HIF3A-201ENST00000244302 KIAA0753Q2KHM9 967 aa14.18□□□□□ -0.14
HIF3A-201ENST00000244302 MFSD14CQ5VZR4 134 aa14.18□□□□□ -0.14
HIF3A-201ENST00000244302 SLC39A4Q6P5W5 647 aa14.18□□□□□ -0.14
HIF3A-201ENST00000244302 KIFAP3Q92845 792 aa14.18□□□□□ -0.14
HIF3A-201ENST00000244302 NTPCRQ9BSD7 190 aaKnown RBP14.18□□□□□ -0.14
HIF3A-201ENST00000244302 TUBGCP2Q9BSJ2 902 aa14.18□□□□□ -0.14
HIF3A-201ENST00000244302 AGPAT3Q9NRZ7 376 aa14.18□□□□□ -0.14
HIF3A-201ENST00000244302 TBX20Q9UMR3 447 aa14.18□□□□□ -0.14
HIF3A-201ENST00000244302 TRAF3IP3Q9Y228 551 aa14.18□□□□□ -0.14
HIF3A-201ENST00000244302 PCDHB13Q9Y5F0 798 aa14.18□□□□□ -0.14
HIF3A-201ENST00000244302 IGKV6-21A0A0C4DH24 114 aa14.18□□□□□ -0.14
HIF3A-201ENST00000244302 EIF3DO15371 548 aaKnown RBP eCLIP14.18□□□□□ -0.14
HIF3A-201ENST00000244302 MAPTP10636 758 aaKnown RBP14.18□□□□□ -0.14
HIF3A-201ENST00000244302 AKR1A1P14550 325 aa14.18□□□□□ -0.14
HIF3A-201ENST00000244302 TMEM62Q0P6H9 643 aa14.18□□□□□ -0.14
HIF3A-201ENST00000244302 RHPN2Q8IUC4 686 aa14.18□□□□□ -0.14
HIF3A-201ENST00000244302 SYCP3Q8IZU3 236 aa14.18□□□□□ -0.14
HIF3A-201ENST00000244302 NOC3LQ8WTT2 800 aaKnown RBP14.18□□□□□ -0.14
HIF3A-201ENST00000244302 ZBTB45Q96K62 511 aaPredicted RBP14.18□□□□□ -0.14
HIF3A-201ENST00000244302 FAM84AQ96KN4 292 aa14.18□□□□□ -0.14
HIF3A-201ENST00000244302 TYW1Q9NV66 732 aaKnown RBP14.18□□□□□ -0.14
HIF3A-201ENST00000244302 SUCLA2Q9P2R7 463 aaPredicted RBP14.18□□□□□ -0.14
HIF3A-201ENST00000244302 GOLGA8IPA6NC78 632 aa14.17□□□□□ -0.14
HIF3A-201ENST00000244302 GOLGA8JA6NMD2 632 aa14.17□□□□□ -0.14
HIF3A-201ENST00000244302 PDXKO00764 312 aa14.17□□□□□ -0.14
HIF3A-201ENST00000244302 VTNP04004 478 aa14.17□□□□□ -0.14
HIF3A-201ENST00000244302 MTIF2P46199 727 aaKnown RBP14.17□□□□□ -0.14
HIF3A-201ENST00000244302 APBA1Q02410 837 aa14.17□□□□□ -0.14
HIF3A-201ENST00000244302 LAMTOR4Q0VGL1 99 aa14.17□□□□□ -0.14
HIF3A-201ENST00000244302 FSCN1Q16658 493 aaKnown RBP14.17□□□□□ -0.14
HIF3A-201ENST00000244302 GNASQ5JWF2 1037 aa14.17□□□□□ -0.14
HIF3A-201ENST00000244302 CXCL17Q6UXB2 119 aa14.17□□□□□ -0.14
HIF3A-201ENST00000244302 RAET1EQ8TD07 263 aa14.17□□□□□ -0.14
HIF3A-201ENST00000244302 CACTINQ8WUQ7 758 aaKnown RBP14.17□□□□□ -0.14
HIF3A-201ENST00000244302 FAM167AQ96KS9 214 aa14.17□□□□□ -0.14
HIF3A-201ENST00000244302 TSG101Q99816 390 aa14.17□□□□□ -0.14
HIF3A-201ENST00000244302 MINDY3Q9H8M7 445 aa14.17□□□□□ -0.14
HIF3A-201ENST00000244302 RIOK3O14730 519 aaKnown RBP14.17□□□□□ -0.14
HIF3A-201ENST00000244302 FKTNO75072 461 aa14.17□□□□□ -0.14
HIF3A-201ENST00000244302 IQCF3P0C7M6 154 aa14.17□□□□□ -0.14
HIF3A-201ENST00000244302 PPFIA1Q13136 1202 aa14.17□□□□□ -0.14
HIF3A-201ENST00000244302 GRIK4Q16099 956 aa14.17□□□□□ -0.14
HIF3A-201ENST00000244302 CDR2LQ86X02 465 aaPredicted RBP14.17□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms