RNA–Protein interactions for RNA: ENST00000229330.8

HCFC2-201, Transcript of host cell factor C2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HCFC2, Length 5,734 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC2-201ENST00000229330 SLC17A8Q8NDX2 589 aa14.74□□□□□ -0.05
HCFC2-201ENST00000229330 MDM1Q8TC05 714 aa14.74□□□□□ -0.05
HCFC2-201ENST00000229330 EHD2Q9NZN4 543 aa14.74□□□□□ -0.05
HCFC2-201ENST00000229330 TMOD4Q9NZQ9 345 aa14.74□□□□□ -0.05
HCFC2-201ENST00000229330 USP31Q70CQ4 1352 aa14.74□□□□□ -0.05
HCFC2-201ENST00000229330 POLR2MP0CAP2 368 aa14.74□□□□□ -0.05
HCFC2-201ENST00000229330 COASYQ13057 564 aa14.74□□□□□ -0.05
HCFC2-201ENST00000229330 LAMB3Q13751 1172 aa14.74□□□□□ -0.05
HCFC2-201ENST00000229330 CYLC2Q14093 348 aaPredicted RBP14.74□□□□□ -0.05
HCFC2-201ENST00000229330 PROCA1Q8NCQ7 364 aaPredicted RBP14.74□□□□□ -0.05
HCFC2-201ENST00000229330 COA7Q96BR5 231 aa14.74□□□□□ -0.05
HCFC2-201ENST00000229330 CSRNP1Q96S65 589 aa14.74□□□□□ -0.05
HCFC2-201ENST00000229330 CNOT8Q9UFF9 292 aaKnown RBP14.74□□□□□ -0.05
HCFC2-201ENST00000229330 ZBBXA8MT70 800 aa14.74□□□□□ -0.05
HCFC2-201ENST00000229330 ATP6V1G2O95670 118 aa14.74□□□□□ -0.05
HCFC2-201ENST00000229330 ACADSP16219 412 aa14.74□□□□□ -0.05
HCFC2-201ENST00000229330 LRRC34Q8IZ02 419 aa14.74□□□□□ -0.05
HCFC2-201ENST00000229330 PIK3R5Q8WYR1 880 aa14.74□□□□□ -0.05
HCFC2-201ENST00000229330 MID2Q9UJV3 735 aa14.74□□□□□ -0.05
HCFC2-201ENST00000229330 LEMD3Q9Y2U8 911 aa14.74□□□□□ -0.05
HCFC2-201ENST00000229330 LPXNO60711 386 aa14.73□□□□□ -0.05
HCFC2-201ENST00000229330 CTDNEP1O95476 244 aa14.73□□□□□ -0.05
HCFC2-201ENST00000229330 GNAT1P11488 350 aa14.73□□□□□ -0.05
HCFC2-201ENST00000229330 FCER1AP12319 257 aa14.73□□□□□ -0.05
HCFC2-201ENST00000229330 TXNRD1Q16881 649 aa14.73□□□□□ -0.05
HCFC2-201ENST00000229330 LONRF1Q17RB8 773 aa14.73□□□□□ -0.05
HCFC2-201ENST00000229330 RARS2Q5T160 578 aaKnown RBP14.73□□□□□ -0.05
HCFC2-201ENST00000229330 PAPD7Q5XG87 772 aaKnown RBP14.73□□□□□ -0.05
HCFC2-201ENST00000229330 DDX42Q86XP3 938 aaKnown RBP eCLIP14.73□□□□□ -0.05
HCFC2-201ENST00000229330 CPXCR1Q8N123 301 aa14.73□□□□□ -0.05
HCFC2-201ENST00000229330 PP2D1A8MPX8 630 aa14.73□□□□□ -0.05
HCFC2-201ENST00000229330 PAPOLAP51003 745 aaKnown RBP14.73□□□□□ -0.05
HCFC2-201ENST00000229330 HIC1Q14526 733 aa14.73□□□□□ -0.05
HCFC2-201ENST00000229330 RABGAP1LQ5R372 815 aa14.73□□□□□ -0.05
HCFC2-201ENST00000229330 HIC2Q96JB3 615 aa14.73□□□□□ -0.05
HCFC2-201ENST00000229330 TFR2Q9UP52 801 aa14.73□□□□□ -0.05
HCFC2-201ENST00000229330 SMG5Q9UPR3 1016 aaKnown RBP14.73□□□□□ -0.05
HCFC2-201ENST00000229330 A0A1W2PQJ5 194 aa14.73□□□□□ -0.05
HCFC2-201ENST00000229330 HSPA4LO95757 839 aa14.73□□□□□ -0.05
HCFC2-201ENST00000229330 UBTFL6P0CB48 400 aaPredicted RBP14.73□□□□□ -0.05
HCFC2-201ENST00000229330 HSPA8P11142 646 aaKnown RBP14.73□□□□□ -0.05
HCFC2-201ENST00000229330 FDPSP14324 419 aaKnown RBP14.73□□□□□ -0.05
HCFC2-201ENST00000229330 PDZD4Q76G19 769 aaPredicted RBP14.73□□□□□ -0.05
HCFC2-201ENST00000229330 NLRX1Q86UT6 975 aa14.73□□□□□ -0.05
HCFC2-201ENST00000229330 TRPV6Q9H1D0 765 aa14.73□□□□□ -0.05
HCFC2-201ENST00000229330 TRABDQ9H4I3 376 aa14.73□□□□□ -0.05
HCFC2-201ENST00000229330 TMBIM4Q9HC24 238 aa14.73□□□□□ -0.05
HCFC2-201ENST00000229330 KCND1Q9NSA2 647 aa14.73□□□□□ -0.05
HCFC2-201ENST00000229330 MAGEA13PA6NCF6 341 aa14.73□□□□□ -0.05
HCFC2-201ENST00000229330 GNGT2O14610 69 aa14.73□□□□□ -0.05
HCFC2-201ENST00000229330 KRT38O76015 456 aa14.73□□□□□ -0.05
HCFC2-201ENST00000229330 NR3C1P04150 777 aa14.73□□□□□ -0.05
HCFC2-201ENST00000229330 NOP14P78316 857 aaKnown RBP14.73□□□□□ -0.05
HCFC2-201ENST00000229330 GPATCH4Q5T3I0 446 aaKnown RBP14.73□□□□□ -0.05
HCFC2-201ENST00000229330 CASKIN2Q8WXE0 1202 aa14.73□□□□□ -0.05
HCFC2-201ENST00000229330 PAPOLBQ9NRJ5 636 aaKnown RBP14.73□□□□□ -0.05
HCFC2-201ENST00000229330 ANKFY1Q9P2R3 1169 aa14.73□□□□□ -0.05
HCFC2-201ENST00000229330 DIP2CQ9Y2E4 1556 aa14.73□□□□□ -0.05
HCFC2-201ENST00000229330 ORC6Q9Y5N6 252 aa14.73□□□□□ -0.05
HCFC2-201ENST00000229330 TMEM120BA0PK00 339 aa14.73□□□□□ -0.05
HCFC2-201ENST00000229330 MAP2K7O14733 419 aa14.73□□□□□ -0.05
HCFC2-201ENST00000229330 TNNC2P02585 160 aa14.73□□□□□ -0.05
HCFC2-201ENST00000229330 SERPINB2P05120 415 aa14.73□□□□□ -0.05
HCFC2-201ENST00000229330 BZW1Q7L1Q6 419 aaKnown RBP14.73□□□□□ -0.05
HCFC2-201ENST00000229330 NACC1Q96RE7 527 aa14.73□□□□□ -0.05
HCFC2-201ENST00000229330 PALLDQ8WX93 1383 aa14.72□□□□□ -0.05
HCFC2-201ENST00000229330 CDH16O75309 829 aa14.72□□□□□ -0.05
HCFC2-201ENST00000229330 SKAP2O75563 359 aaPredicted RBP14.72□□□□□ -0.05
HCFC2-201ENST00000229330 GUCY1A2P33402 732 aa14.72□□□□□ -0.05
HCFC2-201ENST00000229330 SUSD4Q5VX71 490 aa14.72□□□□□ -0.05
HCFC2-201ENST00000229330 ZNF564Q8TBZ8 553 aaPredicted RBP14.72□□□□□ -0.05
HCFC2-201ENST00000229330 LBHD1Q9BQE6 289 aaPredicted RBP14.72□□□□□ -0.05
HCFC2-201ENST00000229330 ROPN1BQ9BZX4 212 aaPredicted RBP14.72□□□□□ -0.05
HCFC2-201ENST00000229330 ROPN1Q9HAT0 212 aaPredicted RBP14.72□□□□□ -0.05
HCFC2-201ENST00000229330 TLK1Q9UKI8 766 aa14.72□□□□□ -0.05
HCFC2-201ENST00000229330 DYNC1LI1Q9Y6G9 523 aaKnown RBP14.72□□□□□ -0.05
HCFC2-201ENST00000229330 GOLGA8SH3BPF8 625 aa14.72□□□□□ -0.05
HCFC2-201ENST00000229330 IL1RL1Q01638 556 aa14.72□□□□□ -0.05
HCFC2-201ENST00000229330 KRT17Q04695 432 aa14.72□□□□□ -0.05
HCFC2-201ENST00000229330 GRM1Q13255 1194 aa14.72□□□□□ -0.05
HCFC2-201ENST00000229330 KCTD6Q8NC69 237 aa14.72□□□□□ -0.05
HCFC2-201ENST00000229330 RBM41Q96IZ5 413 aaKnown RBP14.72□□□□□ -0.05
HCFC2-201ENST00000229330 CALN1Q9BXU9 219 aa14.72□□□□□ -0.05
HCFC2-201ENST00000229330 NUB1Q9Y5A7 615 aa14.72□□□□□ -0.05
HCFC2-201ENST00000229330 A6NJR5 290 aa14.72□□□□□ -0.05
HCFC2-201ENST00000229330 CATSPER1Q8NEC5 780 aa14.72□□□□□ -0.05
HCFC2-201ENST00000229330 NBPF3Q9H094 633 aa14.72□□□□□ -0.05
HCFC2-201ENST00000229330 CYP4F11Q9HBI6 524 aa14.72□□□□□ -0.05
HCFC2-201ENST00000229330 HNRNPDLO14979 420 aaKnown RBP14.72□□□□□ -0.05
HCFC2-201ENST00000229330 IZUMO3Q5VZ72 239 aa14.72□□□□□ -0.05
HCFC2-201ENST00000229330 SPDYE1Q8NFV5 336 aaPredicted RBP14.72□□□□□ -0.05
HCFC2-201ENST00000229330 PRPF31Q8WWY3 499 aaKnown RBP14.72□□□□□ -0.05
HCFC2-201ENST00000229330 TRIM15Q9C019 465 aa14.72□□□□□ -0.05
HCFC2-201ENST00000229330 WWP1Q9H0M0 922 aa14.72□□□□□ -0.05
HCFC2-201ENST00000229330 TTC7AQ9ULT0 858 aaPredicted RBP14.72□□□□□ -0.05
HCFC2-201ENST00000229330 PFASO15067 1338 aa14.72□□□□□ -0.05
HCFC2-201ENST00000229330 MAN1A2O60476 641 aa14.71□□□□□ -0.05
HCFC2-201ENST00000229330 PHF2O75151 1096 aa14.71□□□□□ -0.05
HCFC2-201ENST00000229330 PYGBP11216 843 aa14.71□□□□□ -0.05
HCFC2-201ENST00000229330 ZFXP17010 805 aaPredicted RBP14.71□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms