RNA–Protein interactions for RNA: ENST00000227503.13

SF1-201, Transcript of splicing factor 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SF1, Length 2,850 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-201ENST00000227503 AKR1B1P15121 316 aa15.23■□□□□ 0.03
SF1-201ENST00000227503 HOXA7P31268 230 aaPredicted RBP15.23■□□□□ 0.03
SF1-201ENST00000227503 RPS6KA3P51812 740 aa15.23■□□□□ 0.03
SF1-201ENST00000227503 FAM182BQ5T319 152 aa15.23■□□□□ 0.03
SF1-201ENST00000227503 ANO7Q6IWH7 933 aa15.23■□□□□ 0.03
SF1-201ENST00000227503 NEK9Q8TD19 979 aa15.23■□□□□ 0.03
SF1-201ENST00000227503 HAS1Q92839 578 aa15.23■□□□□ 0.03
SF1-201ENST00000227503 JMJD4Q9H9V9 463 aa15.23■□□□□ 0.03
SF1-201ENST00000227503 AJAP1Q9UKB5 411 aaPredicted RBP15.23■□□□□ 0.03
SF1-201ENST00000227503 COL4A3BPQ9Y5P4 624 aa15.23■□□□□ 0.03
SF1-201ENST00000227503 BHMG1C9JSJ3 638 aaPredicted RBP15.22■□□□□ 0.03
SF1-201ENST00000227503 CLK2P49760 499 aaKnown RBP15.22■□□□□ 0.03
SF1-201ENST00000227503 CRY2Q49AN0 593 aa15.22■□□□□ 0.03
SF1-201ENST00000227503 ALKBH5Q6P6C2 394 aaKnown RBP15.22■□□□□ 0.03
SF1-201ENST00000227503 CLEC10AQ8IUN9 316 aa15.22■□□□□ 0.03
SF1-201ENST00000227503 RPGRQ92834 1020 aaKnown RBP15.22■□□□□ 0.03
SF1-201ENST00000227503 CENPTQ96BT3 561 aa15.22■□□□□ 0.03
SF1-201ENST00000227503 SYT15Q9BQS2 421 aa15.22■□□□□ 0.03
SF1-201ENST00000227503 EDEM3Q9BZQ6 932 aa15.22■□□□□ 0.03
SF1-201ENST00000227503 GPCPD1Q9NPB8 672 aa15.22■□□□□ 0.03
SF1-201ENST00000227503 PAPOLBQ9NRJ5 636 aaKnown RBP15.22■□□□□ 0.03
SF1-201ENST00000227503 CTNNAL1Q9UBT7 734 aa15.22■□□□□ 0.03
SF1-201ENST00000227503 G3BP2Q9UN86 482 aaKnown RBP15.22■□□□□ 0.03
SF1-201ENST00000227503 USP15Q9Y4E8 981 aaPredicted RBP15.22■□□□□ 0.03
SF1-201ENST00000227503 PYGLP06737 847 aa15.22■□□□□ 0.03
SF1-201ENST00000227503 ABCB4P21439 1286 aa15.22■□□□□ 0.03
SF1-201ENST00000227503 PCK1P35558 622 aa15.22■□□□□ 0.03
SF1-201ENST00000227503 EPS15P42566 896 aa15.22■□□□□ 0.03
SF1-201ENST00000227503 TNNI2P48788 182 aa15.22■□□□□ 0.03
SF1-201ENST00000227503 MXRA7P84157 204 aa15.22■□□□□ 0.03
SF1-201ENST00000227503 CNGA2Q16280 664 aa15.22■□□□□ 0.03
SF1-201ENST00000227503 UBE2SQ16763 222 aa15.22■□□□□ 0.03
SF1-201ENST00000227503 LONRF1Q17RB8 773 aa15.22■□□□□ 0.03
SF1-201ENST00000227503 DCAF12L1Q5VU92 463 aa15.22■□□□□ 0.03
SF1-201ENST00000227503 FAM47EQ6ZV65 393 aa15.22■□□□□ 0.03
SF1-201ENST00000227503 SLF2Q8IX21 1173 aa15.22■□□□□ 0.03
SF1-201ENST00000227503 PROM2Q8N271 834 aa15.22■□□□□ 0.03
SF1-201ENST00000227503 CERKQ8TCT0 537 aa15.22■□□□□ 0.03
SF1-201ENST00000227503 UTP4Q969X6 686 aaKnown RBP15.22■□□□□ 0.03
SF1-201ENST00000227503 CRAMP1Q96RY5 1269 aa15.22■□□□□ 0.03
SF1-201ENST00000227503 TXLNGYQ9BZA5 131 aa15.22■□□□□ 0.03
SF1-201ENST00000227503 LRRC27Q9C0I9 530 aa15.22■□□□□ 0.03
SF1-201ENST00000227503 DNAJC17Q9NVM6 304 aaKnown RBP15.22■□□□□ 0.03
SF1-201ENST00000227503 UTP18Q9Y5J1 556 aaKnown RBP eCLIP15.22■□□□□ 0.03
SF1-201ENST00000227503 PNMA6FA0A0J9YX94 578 aa15.22■□□□□ 0.03
SF1-201ENST00000227503 NPHP3-ACAD11A0A0J9YXS1 232 aa15.22■□□□□ 0.03
SF1-201ENST00000227503 KRT13P13646 458 aa15.22■□□□□ 0.03
SF1-201ENST00000227503 PAPOLAP51003 745 aaKnown RBP15.22■□□□□ 0.03
SF1-201ENST00000227503 EIF6P56537 245 aaKnown RBP15.22■□□□□ 0.03
SF1-201ENST00000227503 COASYQ13057 564 aa15.22■□□□□ 0.03
SF1-201ENST00000227503 PPP1R18Q6NYC8 613 aa15.22■□□□□ 0.03
SF1-201ENST00000227503 MYOCDQ8IZQ8 938 aa15.22■□□□□ 0.03
SF1-201ENST00000227503 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP15.22■□□□□ 0.032e-6■■■■□ 19.4
SF1-201ENST00000227503 TSG101Q99816 390 aa15.22■□□□□ 0.03
SF1-201ENST00000227503 POLLQ9UGP5 575 aa15.22■□□□□ 0.03
SF1-201ENST00000227503 NAGPAQ9UK23 515 aa15.22■□□□□ 0.03
SF1-201ENST00000227503 DAGLAQ9Y4D2 1042 aa15.22■□□□□ 0.03
SF1-201ENST00000227503 RPTORQ8N122 1335 aa15.21■□□□□ 0.03
SF1-201ENST00000227503 TAF1LQ8IZX4 1826 aa15.21■□□□□ 0.03
SF1-201ENST00000227503 LACTBP83111 547 aaPredicted RBP15.21■□□□□ 0.03
SF1-201ENST00000227503 DR1Q01658 176 aa15.21■□□□□ 0.03
SF1-201ENST00000227503 MGAT5Q09328 741 aa15.21■□□□□ 0.03
SF1-201ENST00000227503 RNF220Q5VTB9 566 aa15.21■□□□□ 0.03
SF1-201ENST00000227503 LONP2Q86WA8 852 aa15.21■□□□□ 0.03
SF1-201ENST00000227503 ADGRF4Q8IZF3 695 aa15.21■□□□□ 0.03
SF1-201ENST00000227503 C18orf8Q96DM3 657 aa15.21■□□□□ 0.03
SF1-201ENST00000227503 PABPC3Q9H361 631 aaKnown RBP15.21■□□□□ 0.03
SF1-201ENST00000227503 ETNK1Q9HBU6 452 aa15.21■□□□□ 0.03
SF1-201ENST00000227503 FAM114A2Q9NRY5 505 aa15.21■□□□□ 0.03
SF1-201ENST00000227503 ZDHHC18Q9NUE0 388 aa15.21■□□□□ 0.03
SF1-201ENST00000227503 TMOD4Q9NZQ9 345 aa15.21■□□□□ 0.03
SF1-201ENST00000227503 PPP1R9AQ9ULJ8 1098 aa15.21■□□□□ 0.03
SF1-201ENST00000227503 NEFHP12036 1026 aa15.21■□□□□ 0.02
SF1-201ENST00000227503 RAD23BP54727 409 aa15.21■□□□□ 0.02
SF1-201ENST00000227503 ATP11AP98196 1134 aa15.21■□□□□ 0.02
SF1-201ENST00000227503 POU5F1Q01860 360 aaKnown RBP15.21■□□□□ 0.02
SF1-201ENST00000227503 ZNF543Q08ER8 600 aa15.21■□□□□ 0.02
SF1-201ENST00000227503 BNIP1Q12981 228 aa15.21■□□□□ 0.02
SF1-201ENST00000227503 PPP1R15BQ5SWA1 713 aa15.21■□□□□ 0.02
SF1-201ENST00000227503 DPP8Q6V1X1 898 aaPredicted RBP15.21■□□□□ 0.02
SF1-201ENST00000227503 ARHGAP27Q6ZUM4 889 aa15.21■□□□□ 0.02
SF1-201ENST00000227503 ANKLE1Q8NAG6 615 aa15.21■□□□□ 0.02
SF1-201ENST00000227503 RBM46Q8TBY0 533 aaKnown RBP15.21■□□□□ 0.02
SF1-201ENST00000227503 RPS6KC1Q96S38 1066 aa15.21■□□□□ 0.02
SF1-201ENST00000227503 ZHX3Q9H4I2 956 aa15.21■□□□□ 0.02
SF1-201ENST00000227503 KCNK9Q9NPC2 374 aa15.21■□□□□ 0.02
SF1-201ENST00000227503 HOMER3Q9NSC5 361 aa15.21■□□□□ 0.02
SF1-201ENST00000227503 DDX25Q9UHL0 483 aaKnown RBP15.21■□□□□ 0.02
SF1-201ENST00000227503 FOCADQ5VW36 1801 aa15.2■□□□□ 0.02
SF1-201ENST00000227503 SESN3P58005 492 aa15.2■□□□□ 0.02
SF1-201ENST00000227503 FKBP3Q00688 224 aaKnown RBP15.2■□□□□ 0.02
SF1-201ENST00000227503 KLRC3Q07444 240 aa15.2■□□□□ 0.02
SF1-201ENST00000227503 GALNTL6Q49A17 601 aa15.2■□□□□ 0.02
SF1-201ENST00000227503 ZDHHC24Q6UX98 284 aa15.2■□□□□ 0.02
SF1-201ENST00000227503 FAM196AQ6ZSG2 479 aa15.2■□□□□ 0.02
SF1-201ENST00000227503 IRF2BP2Q7Z5L9 587 aa15.2■□□□□ 0.02
SF1-201ENST00000227503 TBC1D16Q8TBP0 767 aa15.2■□□□□ 0.02
SF1-201ENST00000227503 U2AF1L4Q8WU68 220 aaKnown RBP15.2■□□□□ 0.02
SF1-201ENST00000227503 TEKT4Q8WW24 435 aa15.2■□□□□ 0.02
SF1-201ENST00000227503 SPIRE2Q8WWL2 714 aa15.2■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 82.2 ms