RNA–Protein interactions for RNA: ENST00000221494.9

SF3A2-201, Transcript of splicing factor 3a subunit 2, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene SF3A2, Length 1,963 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A2-201ENST00000221494 CENPHQ9H3R5 247 aa17.28■□□□□ 0.36
SF3A2-201ENST00000221494 TRAF3IP3Q9Y228 551 aa17.28■□□□□ 0.36
SF3A2-201ENST00000221494 CCT8L1PA6NM43 557 aa17.27■□□□□ 0.36
SF3A2-201ENST00000221494 SLC37A4O43826 429 aa17.27■□□□□ 0.36
SF3A2-201ENST00000221494 TBC1D12O60347 775 aa17.27■□□□□ 0.36
SF3A2-201ENST00000221494 EEF2P13639 858 aaKnown RBP17.27■□□□□ 0.36
SF3A2-201ENST00000221494 UCHL3P15374 230 aa17.27■□□□□ 0.36
SF3A2-201ENST00000221494 SLC8A3P57103 927 aa17.27■□□□□ 0.36
SF3A2-201ENST00000221494 MAGOHP61326 146 aaKnown RBP17.27■□□□□ 0.36
SF3A2-201ENST00000221494 POU5F1Q01860 360 aaKnown RBP17.27■□□□□ 0.36
SF3A2-201ENST00000221494 KCNH2Q12809 1159 aa17.27■□□□□ 0.36
SF3A2-201ENST00000221494 LRRC41Q15345 812 aa17.27■□□□□ 0.36
SF3A2-201ENST00000221494 QPCTQ16769 361 aa17.27■□□□□ 0.36
SF3A2-201ENST00000221494 TBC1D10BQ4KMP7 808 aaPredicted RBP17.27■□□□□ 0.36
SF3A2-201ENST00000221494 ZNF571Q7Z3V5 609 aaPredicted RBP17.27■□□□□ 0.36
SF3A2-201ENST00000221494 MAGOHBQ96A72 148 aaKnown RBP17.27■□□□□ 0.36
SF3A2-201ENST00000221494 SPAG5Q96R06 1193 aa17.27■□□□□ 0.36
SF3A2-201ENST00000221494 TMEM109Q9BVC6 243 aa17.27■□□□□ 0.36
SF3A2-201ENST00000221494 CPVLQ9H3G5 476 aa17.27■□□□□ 0.36
SF3A2-201ENST00000221494 METTL14Q9HCE5 456 aaKnown RBP17.27■□□□□ 0.36
SF3A2-201ENST00000221494 BIN2Q9UBW5 565 aaPredicted RBP17.27■□□□□ 0.36
SF3A2-201ENST00000221494 CNOT8Q9UFF9 292 aaKnown RBP17.27■□□□□ 0.36
SF3A2-201ENST00000221494 TPX2Q9ULW0 747 aaKnown RBP17.27■□□□□ 0.36
SF3A2-201ENST00000221494 SUFUQ9UMX1 484 aa17.27■□□□□ 0.36
SF3A2-201ENST00000221494 A0A1B0GUA9 196 aa17.26■□□□□ 0.35
SF3A2-201ENST00000221494 CCDC169A6NNP5 214 aa17.26■□□□□ 0.35
SF3A2-201ENST00000221494 GH2P01242 217 aa17.26■□□□□ 0.35
SF3A2-201ENST00000221494 AFPP02771 609 aaKnown RBP17.26■□□□□ 0.35
SF3A2-201ENST00000221494 FERP16591 822 aa17.26■□□□□ 0.35
SF3A2-201ENST00000221494 YBX3P16989 372 aaKnown RBP eCLIP17.26■□□□□ 0.356e-10■■□□□ 12.3
SF3A2-201ENST00000221494 HSPA6P17066 643 aa17.26■□□□□ 0.35
SF3A2-201ENST00000221494 PTENP60484 403 aa17.26■□□□□ 0.35
SF3A2-201ENST00000221494 MAP3K10Q02779 954 aa17.26■□□□□ 0.35
SF3A2-201ENST00000221494 DHX34Q14147 1143 aaKnown RBP17.26■□□□□ 0.35
SF3A2-201ENST00000221494 RASA3Q14644 834 aa17.26■□□□□ 0.35
SF3A2-201ENST00000221494 KCNK18Q7Z418 384 aa17.26■□□□□ 0.35
SF3A2-201ENST00000221494 NT5DC3Q86UY8 548 aa17.26■□□□□ 0.35
SF3A2-201ENST00000221494 FMO2Q99518 471 aa17.26■□□□□ 0.35
SF3A2-201ENST00000221494 GLT8D2Q9H1C3 349 aa17.26■□□□□ 0.35
SF3A2-201ENST00000221494 NEUROG2Q9H2A3 272 aa17.26■□□□□ 0.35
SF3A2-201ENST00000221494 EMILIN3Q9NT22 766 aa17.26■□□□□ 0.35
SF3A2-201ENST00000221494 STK24Q9Y6E0 443 aa17.26■□□□□ 0.35
SF3A2-201ENST00000221494 ASTN2O75129 1339 aaPredicted RBP17.26■□□□□ 0.35
SF3A2-201ENST00000221494 POTEMA6NI47 508 aa17.26■□□□□ 0.35
SF3A2-201ENST00000221494 SLC16A3O15427 465 aaKnown RBP17.26■□□□□ 0.35
SF3A2-201ENST00000221494 DAPK3O43293 454 aa17.26■□□□□ 0.35
SF3A2-201ENST00000221494 DNA2P51530 1060 aa17.26■□□□□ 0.35
SF3A2-201ENST00000221494 DHX9Q08211 1270 aaKnown RBP17.26■□□□□ 0.35
SF3A2-201ENST00000221494 ADAM9Q13443 819 aa17.26■□□□□ 0.35
SF3A2-201ENST00000221494 GPC2Q8N158 579 aa17.26■□□□□ 0.35
SF3A2-201ENST00000221494 SCFD1Q8WVM8 642 aa17.26■□□□□ 0.35
SF3A2-201ENST00000221494 HOOK2Q96ED9 719 aa17.26■□□□□ 0.35
SF3A2-201ENST00000221494 ZNF317Q96PQ6 595 aaPredicted RBP17.26■□□□□ 0.35
SF3A2-201ENST00000221494 PIGSQ96S52 555 aa17.26■□□□□ 0.35
SF3A2-201ENST00000221494 DDX47Q9H0S4 455 aaKnown RBP17.26■□□□□ 0.35
SF3A2-201ENST00000221494 HAUS2Q9NVX0 235 aa17.26■□□□□ 0.35
SF3A2-201ENST00000221494 SCAF8Q9UPN6 1271 aaKnown RBP17.26■□□□□ 0.35
SF3A2-201ENST00000221494 GOLGA6L10A0A0M3HER8 536 aa17.25■□□□□ 0.35
SF3A2-201ENST00000221494 TDP2O95551 362 aa17.25■□□□□ 0.35
SF3A2-201ENST00000221494 TNNI2P48788 182 aa17.25■□□□□ 0.35
SF3A2-201ENST00000221494 JAM2P57087 298 aa17.25■□□□□ 0.35
SF3A2-201ENST00000221494 LMNB2Q03252 620 aa17.25■□□□□ 0.35
SF3A2-201ENST00000221494 ICA1Q05084 483 aa17.25■□□□□ 0.35
SF3A2-201ENST00000221494 ZNF543Q08ER8 600 aa17.25■□□□□ 0.35
SF3A2-201ENST00000221494 BTNL9Q6UXG8 535 aa17.25■□□□□ 0.35
SF3A2-201ENST00000221494 PIGWQ7Z7B1 504 aa17.25■□□□□ 0.35
SF3A2-201ENST00000221494 OR2W6PQ8NHA6 318 aa17.25■□□□□ 0.35
SF3A2-201ENST00000221494 N4BP2L2Q92802 583 aaPredicted RBP17.25■□□□□ 0.35
SF3A2-201ENST00000221494 MIEF2Q96C03 454 aa17.25■□□□□ 0.35
SF3A2-201ENST00000221494 TEPSINQ96N21 525 aa17.25■□□□□ 0.35
SF3A2-201ENST00000221494 NSRP1Q9H0G5 558 aaKnown RBP17.25■□□□□ 0.35
SF3A2-201ENST00000221494 CARD9Q9H257 536 aa17.25■□□□□ 0.35
SF3A2-201ENST00000221494 ARMCX3Q9UH62 379 aaPredicted RBP17.25■□□□□ 0.35
SF3A2-201ENST00000221494 AMFRQ9UKV5 643 aa17.25■□□□□ 0.35
SF3A2-201ENST00000221494 SLC12A4Q9UP95 1085 aa17.25■□□□□ 0.35
SF3A2-201ENST00000221494 GREB1LQ9C091 1923 aaPredicted RBP17.25■□□□□ 0.35
SF3A2-201ENST00000221494 FRMPD2Q68DX3 1309 aaPredicted RBP17.24■□□□□ 0.35
SF3A2-201ENST00000221494 EDIL3O43854 480 aa17.24■□□□□ 0.35
SF3A2-201ENST00000221494 TMOD1P28289 359 aa17.24■□□□□ 0.35
SF3A2-201ENST00000221494 MMP13P45452 471 aa17.24■□□□□ 0.35
SF3A2-201ENST00000221494 CLK2P49760 499 aaKnown RBP17.24■□□□□ 0.35
SF3A2-201ENST00000221494 EXOC3L4Q17RC7 722 aa17.24■□□□□ 0.35
SF3A2-201ENST00000221494 TLDC1Q6P9B6 456 aa17.24■□□□□ 0.35
SF3A2-201ENST00000221494 MIGA2Q7L4E1 593 aa17.24■□□□□ 0.35
SF3A2-201ENST00000221494 GLIS3Q8NEA6 775 aa17.24■□□□□ 0.35
SF3A2-201ENST00000221494 ZNF526Q8TF50 670 aaPredicted RBP17.24■□□□□ 0.35
SF3A2-201ENST00000221494 UBA5Q9GZZ9 404 aa17.24■□□□□ 0.35
SF3A2-201ENST00000221494 PABPC3Q9H361 631 aaKnown RBP17.24■□□□□ 0.35
SF3A2-201ENST00000221494 BATF3Q9NR55 127 aa17.24■□□□□ 0.35
SF3A2-201ENST00000221494 TMEM260Q9NX78 707 aa17.24■□□□□ 0.35
SF3A2-201ENST00000221494 GPRC5DQ9NZD1 345 aa17.24■□□□□ 0.35
SF3A2-201ENST00000221494 PARP2Q9UGN5 583 aa17.24■□□□□ 0.35
SF3A2-201ENST00000221494 AGTP01019 485 aa17.24■□□□□ 0.35
SF3A2-201ENST00000221494 RNASE9P60153 205 aaKnown RBP17.24■□□□□ 0.35
SF3A2-201ENST00000221494 TNFAIP1Q13829 316 aa17.24■□□□□ 0.35
SF3A2-201ENST00000221494 DUPD1Q68J44 220 aa17.24■□□□□ 0.35
SF3A2-201ENST00000221494 FAM228AQ86W67 206 aa17.24■□□□□ 0.35
SF3A2-201ENST00000221494 DDX42Q86XP3 938 aaKnown RBP eCLIP17.24■□□□□ 0.35
SF3A2-201ENST00000221494 KCTD17Q8N5Z5 321 aa17.24■□□□□ 0.35
SF3A2-201ENST00000221494 NUDT12Q9BQG2 462 aa17.24■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms