RNA–Protein interactions for RNA: ENST00000221232.9

CNOT3-201, Transcript of CCR4-NOT transcription complex subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CNOT3, Length 2,852 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT3-201ENST00000221232 MIER3Q7Z3K6 550 aa15.89■□□□□ 0.13
CNOT3-201ENST00000221232 NT5DC3Q86UY8 548 aa15.89■□□□□ 0.13
CNOT3-201ENST00000221232 LARGE2Q8N3Y3 721 aa15.89■□□□□ 0.13
CNOT3-201ENST00000221232 SCFD2Q8WU76 684 aa15.89■□□□□ 0.13
CNOT3-201ENST00000221232 UBLCP1Q8WVY7 318 aaPredicted RBP15.89■□□□□ 0.13
CNOT3-201ENST00000221232 PBKQ96KB5 322 aa15.89■□□□□ 0.13
CNOT3-201ENST00000221232 BUD13Q9BRD0 619 aaKnown RBP eCLIP15.89■□□□□ 0.132e-7■■■■□ 22.3
CNOT3-201ENST00000221232 STK33Q9BYT3 514 aa15.89■□□□□ 0.13
CNOT3-201ENST00000221232 RASSF4Q9H2L5 321 aa15.89■□□□□ 0.13
CNOT3-201ENST00000221232 TAF1DQ9H5J8 278 aaPredicted RBP15.89■□□□□ 0.13
CNOT3-201ENST00000221232 SLC26A4O43511 780 aa15.88■□□□□ 0.13
CNOT3-201ENST00000221232 ALAS1P13196 640 aa15.88■□□□□ 0.13
CNOT3-201ENST00000221232 MKRN4PQ13434 485 aaPredicted RBP15.88■□□□□ 0.13
CNOT3-201ENST00000221232 CTNNBL1Q8WYA6 563 aaPredicted RBP15.88■□□□□ 0.13
CNOT3-201ENST00000221232 CNKSR1Q969H4 720 aa15.88■□□□□ 0.13
CNOT3-201ENST00000221232 TRIM51Q9BSJ1 452 aa15.88■□□□□ 0.13
CNOT3-201ENST00000221232 KCNH7Q9NS40 1196 aa15.88■□□□□ 0.13
CNOT3-201ENST00000221232 AMFRQ9UKV5 643 aa15.88■□□□□ 0.13
CNOT3-201ENST00000221232 EMSYQ7Z589 1322 aa15.88■□□□□ 0.13
CNOT3-201ENST00000221232 LRRC37AA6NMS7 1700 aa15.88■□□□□ 0.13
CNOT3-201ENST00000221232 MYCLP12524 364 aaPredicted RBP15.88■□□□□ 0.13
CNOT3-201ENST00000221232 FAM84AQ96KN4 292 aa15.88■□□□□ 0.13
CNOT3-201ENST00000221232 GPR88Q9GZN0 384 aa15.88■□□□□ 0.13
CNOT3-201ENST00000221232 VCPKMTQ9H867 229 aa15.88■□□□□ 0.13
CNOT3-201ENST00000221232 HERC5Q9UII4 1024 aaKnown RBP15.88■□□□□ 0.13
CNOT3-201ENST00000221232 SIPA1L1O43166 1804 aa15.88■□□□□ 0.13
CNOT3-201ENST00000221232 EIF3DO15371 548 aaKnown RBP eCLIP15.87■□□□□ 0.13
CNOT3-201ENST00000221232 STYK1Q6J9G0 422 aa15.87■□□□□ 0.13
CNOT3-201ENST00000221232 ARHGEF19Q8IW93 802 aa15.87■□□□□ 0.13
CNOT3-201ENST00000221232 LMBR1Q8WVP7 490 aa15.87■□□□□ 0.13
CNOT3-201ENST00000221232 C7orf43Q8WVR3 580 aa15.87■□□□□ 0.13
CNOT3-201ENST00000221232 ZNF341Q9BYN7 854 aa15.87■□□□□ 0.13
CNOT3-201ENST00000221232 RAVER2Q9HCJ3 691 aaKnown RBP15.87■□□□□ 0.13
CNOT3-201ENST00000221232 TMEM59LQ9UK28 342 aa15.87■□□□□ 0.13
CNOT3-201ENST00000221232 STK24Q9Y6E0 443 aa15.87■□□□□ 0.13
CNOT3-201ENST00000221232 ATMINO43313 823 aaPredicted RBP15.87■□□□□ 0.13
CNOT3-201ENST00000221232 EIF2AK2P19525 551 aaKnown RBP15.87■□□□□ 0.13
CNOT3-201ENST00000221232 SEC24CP53992 1094 aa15.87■□□□□ 0.13
CNOT3-201ENST00000221232 PPP3CAQ08209 521 aa15.87■□□□□ 0.13
CNOT3-201ENST00000221232 CCDC127Q96BQ5 260 aa15.87■□□□□ 0.13
CNOT3-201ENST00000221232 KIFC3Q9BVG8 833 aa15.87■□□□□ 0.13
CNOT3-201ENST00000221232 RANBP17Q9H2T7 1088 aaKnown RBP15.87■□□□□ 0.13
CNOT3-201ENST00000221232 APEX2Q9UBZ4 518 aa15.87■□□□□ 0.13
CNOT3-201ENST00000221232 EIF3HO15372 352 aaKnown RBP eCLIP15.86■□□□□ 0.13
CNOT3-201ENST00000221232 TNFRSF8P28908 595 aa15.86■□□□□ 0.13
CNOT3-201ENST00000221232 HSD17B3P37058 310 aa15.86■□□□□ 0.13
CNOT3-201ENST00000221232 FKBP1AP62942 108 aaKnown RBP15.86■□□□□ 0.13
CNOT3-201ENST00000221232 BFSP1Q12934 665 aa15.86■□□□□ 0.13
CNOT3-201ENST00000221232 SLC30A5Q8TAD4 765 aa15.86■□□□□ 0.13
CNOT3-201ENST00000221232 ACTRT1Q8TDG2 376 aa15.86■□□□□ 0.13
CNOT3-201ENST00000221232 GLG1Q92896 1179 aa15.86■□□□□ 0.13
CNOT3-201ENST00000221232 MXRA8Q9BRK3 442 aa15.86■□□□□ 0.13
CNOT3-201ENST00000221232 COG5Q9UP83 839 aa15.86■□□□□ 0.13
CNOT3-201ENST00000221232 SLX4Q8IY92 1834 aa15.86■□□□□ 0.13
CNOT3-201ENST00000221232 GRIN2DO15399 1336 aa15.86■□□□□ 0.13
CNOT3-201ENST00000221232 SLC16A4O15374 487 aa15.86■□□□□ 0.13
CNOT3-201ENST00000221232 CALCAP01258 141 aa15.86■□□□□ 0.13
CNOT3-201ENST00000221232 NPEPPSP55786 919 aa15.86■□□□□ 0.13
CNOT3-201ENST00000221232 MAPK7Q13164 816 aa15.86■□□□□ 0.13
CNOT3-201ENST00000221232 NBPF9Q3BBW0 867 aa15.86■□□□□ 0.13
CNOT3-201ENST00000221232 RSBN1LQ6PCB5 846 aaPredicted RBP15.86■□□□□ 0.13
CNOT3-201ENST00000221232 FAM151AQ8WW52 585 aa15.86■□□□□ 0.13
CNOT3-201ENST00000221232 POP1Q99575 1024 aaKnown RBP15.86■□□□□ 0.13
CNOT3-201ENST00000221232 ISCUQ9H1K1 167 aa15.86■□□□□ 0.13
CNOT3-201ENST00000221232 LRRC4CQ9HCJ2 640 aa15.86■□□□□ 0.13
CNOT3-201ENST00000221232 ZHX2Q9Y6X8 837 aa15.86■□□□□ 0.13
CNOT3-201ENST00000221232 ATRNL1Q5VV63 1379 aa15.86■□□□□ 0.13
CNOT3-201ENST00000221232 C10orf71Q711Q0 1435 aa15.86■□□□□ 0.13
CNOT3-201ENST00000221232 GREB1LQ9C091 1923 aaPredicted RBP15.86■□□□□ 0.13
CNOT3-201ENST00000221232 BTNL10A8MVZ5 291 aa15.85■□□□□ 0.13
CNOT3-201ENST00000221232 SHOX2O60902 331 aaPredicted RBP15.85■□□□□ 0.13
CNOT3-201ENST00000221232 NPM3O75607 178 aaKnown RBP15.85■□□□□ 0.13
CNOT3-201ENST00000221232 KRT13P13646 458 aa15.85■□□□□ 0.13
CNOT3-201ENST00000221232 ECHS1P30084 290 aa15.85■□□□□ 0.13
CNOT3-201ENST00000221232 CTNNA1P35221 906 aaKnown RBP15.85■□□□□ 0.13
CNOT3-201ENST00000221232 PEX3P56589 373 aa15.85■□□□□ 0.13
CNOT3-201ENST00000221232 SOX10P56693 466 aa15.85■□□□□ 0.13
CNOT3-201ENST00000221232 SP4Q02446 784 aa15.85■□□□□ 0.13
CNOT3-201ENST00000221232 CPNE8Q86YQ8 564 aa15.85■□□□□ 0.13
CNOT3-201ENST00000221232 OLIG1Q8TAK6 271 aa15.85■□□□□ 0.13
CNOT3-201ENST00000221232 RUBCNQ92622 972 aa15.85■□□□□ 0.13
CNOT3-201ENST00000221232 FBXL5Q9UKA1 691 aa15.85■□□□□ 0.13
CNOT3-201ENST00000221232 STXBP5LQ9Y2K9 1186 aa15.85■□□□□ 0.13
CNOT3-201ENST00000221232 FRMPD4Q14CM0 1322 aa15.85■□□□□ 0.13
CNOT3-201ENST00000221232 NDUFAB1O14561 156 aa15.85■□□□□ 0.13
CNOT3-201ENST00000221232 BACH1O14867 736 aa15.85■□□□□ 0.13
CNOT3-201ENST00000221232 FTLP02792 175 aaPredicted RBP15.85■□□□□ 0.13
CNOT3-201ENST00000221232 LMNB1P20700 586 aa15.85■□□□□ 0.13
CNOT3-201ENST00000221232 SF3A3Q12874 501 aaKnown RBP eCLIP15.85■□□□□ 0.133e-6■■■■□ 25.6
CNOT3-201ENST00000221232 ODF2Q5BJF6 829 aa15.85■□□□□ 0.13
CNOT3-201ENST00000221232 DCAF12L1Q5VU92 463 aa15.85■□□□□ 0.13
CNOT3-201ENST00000221232 PLA2G4FQ68DD2 849 aa15.85■□□□□ 0.13
CNOT3-201ENST00000221232 STXBP4Q6ZWJ1 553 aa15.85■□□□□ 0.13
CNOT3-201ENST00000221232 BTBD6Q96KE9 485 aa15.85■□□□□ 0.13
CNOT3-201ENST00000221232 DMAC2Q9NW81 257 aa15.85■□□□□ 0.13
CNOT3-201ENST00000221232 CTTNBP2NLQ9P2B4 639 aa15.85■□□□□ 0.13
CNOT3-201ENST00000221232 CAP2P40123 477 aa15.85■□□□□ 0.13
CNOT3-201ENST00000221232 ITGB3BPQ13352 177 aaPredicted RBP15.85■□□□□ 0.13
CNOT3-201ENST00000221232 UAP1Q16222 522 aaPredicted RBP15.85■□□□□ 0.13
CNOT3-201ENST00000221232 PHLDB2Q86SQ0 1253 aa15.85■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms