RNA–Protein interactions for RNA: ENST00000220888.9

TRPS1-201, Transcript of transcriptional repressor GATA binding 1, humanhuman

TSL 1 (best) BASIC

Gene TRPS1, Length 5,480 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRPS1-201ENST00000220888 LCA5Q86VQ0 697 aa11.26□□□□□ -0.61
TRPS1-201ENST00000220888 OTUB1Q96FW1 271 aaPredicted RBP11.26□□□□□ -0.61
TRPS1-201ENST00000220888 CPSF2Q9P2I0 782 aaKnown RBP11.26□□□□□ -0.61
TRPS1-201ENST00000220888 UBA6A0AVT1 1052 aaPredicted RBP11.26□□□□□ -0.61
TRPS1-201ENST00000220888 CFLARO15519 480 aa11.26□□□□□ -0.61
TRPS1-201ENST00000220888 KRT37O76014 449 aa11.26□□□□□ -0.61
TRPS1-201ENST00000220888 EIF2B5Q13144 721 aaKnown RBP11.26□□□□□ -0.61
TRPS1-201ENST00000220888 CUL1Q13616 776 aa11.26□□□□□ -0.61
TRPS1-201ENST00000220888 PPP1R18Q6NYC8 613 aa11.26□□□□□ -0.61
TRPS1-201ENST00000220888 GLB1LQ6UWU2 654 aa11.26□□□□□ -0.61
TRPS1-201ENST00000220888 RHOT2Q8IXI1 618 aa11.26□□□□□ -0.61
TRPS1-201ENST00000220888 STKLD1Q8NE28 680 aa11.26□□□□□ -0.61
TRPS1-201ENST00000220888 WDR48Q8TAF3 677 aa11.26□□□□□ -0.61
TRPS1-201ENST00000220888 DYDC2Q96IM9 177 aa11.26□□□□□ -0.61
TRPS1-201ENST00000220888 NUDT12Q9BQG2 462 aa11.26□□□□□ -0.61
TRPS1-201ENST00000220888 SELENONQ9NZV5 590 aa11.26□□□□□ -0.61
TRPS1-201ENST00000220888 SLC9A2Q9UBY0 812 aa11.26□□□□□ -0.61
TRPS1-201ENST00000220888 JCADQ9P266 1359 aa11.26□□□□□ -0.61
TRPS1-201ENST00000220888 F5H6K3 240 aa11.26□□□□□ -0.61
TRPS1-201ENST00000220888 KLRC3Q07444 240 aa11.26□□□□□ -0.61
TRPS1-201ENST00000220888 ADCK2Q7Z695 626 aa11.26□□□□□ -0.61
TRPS1-201ENST00000220888 OSBP2Q969R2 916 aa11.26□□□□□ -0.61
TRPS1-201ENST00000220888 GLT1D1Q96MS3 346 aa11.26□□□□□ -0.61
TRPS1-201ENST00000220888 EPAS1Q99814 870 aa11.26□□□□□ -0.61
TRPS1-201ENST00000220888 PPP1R9AQ9ULJ8 1098 aa11.26□□□□□ -0.61
TRPS1-201ENST00000220888 PCDHGB4Q9UN71 923 aa11.26□□□□□ -0.61
TRPS1-201ENST00000220888 MROH7-TTC4A0A0A0MT08 1334 aa11.26□□□□□ -0.61
TRPS1-201ENST00000220888 C19orf81C9J6K1 198 aa11.25□□□□□ -0.61
TRPS1-201ENST00000220888 GH1P01241 217 aa11.25□□□□□ -0.61
TRPS1-201ENST00000220888 SFSWAPQ12872 951 aaKnown RBP11.25□□□□□ -0.61
TRPS1-201ENST00000220888 MTMR2Q13614 643 aa11.25□□□□□ -0.61
TRPS1-201ENST00000220888 ZC3H12BQ5HYM0 836 aaKnown RBP11.25□□□□□ -0.61
TRPS1-201ENST00000220888 ARL6IP4Q66PJ3 421 aaKnown RBP11.25□□□□□ -0.61
TRPS1-201ENST00000220888 TRMT10CQ7L0Y3 403 aaKnown RBP11.25□□□□□ -0.61
TRPS1-201ENST00000220888 ZNF512Q96ME7 567 aaPredicted RBP11.25□□□□□ -0.61
TRPS1-201ENST00000220888 THAP9Q9H5L6 903 aa11.25□□□□□ -0.61
TRPS1-201ENST00000220888 CDV3Q9UKY7 258 aaKnown RBP11.25□□□□□ -0.61
TRPS1-201ENST00000220888 METP08581 1390 aa11.25□□□□□ -0.61
TRPS1-201ENST00000220888 SERPIND1P05546 499 aa11.25□□□□□ -0.61
TRPS1-201ENST00000220888 LIFRP42702 1097 aa11.25□□□□□ -0.61
TRPS1-201ENST00000220888 STAT5BP51692 787 aa11.25□□□□□ -0.61
TRPS1-201ENST00000220888 EFNA5P52803 228 aa11.25□□□□□ -0.61
TRPS1-201ENST00000220888 KRT39Q6A163 491 aa11.25□□□□□ -0.61
TRPS1-201ENST00000220888 USP17L6PQ6QN14 398 aa11.25□□□□□ -0.61
TRPS1-201ENST00000220888 TMEM47Q9BQJ4 181 aa11.25□□□□□ -0.61
TRPS1-201ENST00000220888 POLR3EQ9NVU0 708 aa11.25□□□□□ -0.61
TRPS1-201ENST00000220888 ATP8A1Q9Y2Q0 1164 aa11.25□□□□□ -0.61
TRPS1-201ENST00000220888 STXBP3O00186 592 aa11.25□□□□□ -0.61
TRPS1-201ENST00000220888 PER1O15534 1290 aaPredicted RBP11.25□□□□□ -0.61
TRPS1-201ENST00000220888 RPS6KA5O75582 802 aa11.25□□□□□ -0.61
TRPS1-201ENST00000220888 EEF1B2P24534 225 aaKnown RBP11.25□□□□□ -0.61
TRPS1-201ENST00000220888 HLFQ16534 295 aa11.25□□□□□ -0.61
TRPS1-201ENST00000220888 ANO4Q32M45 955 aa11.25□□□□□ -0.61
TRPS1-201ENST00000220888 NAALADL2Q58DX5 795 aa11.25□□□□□ -0.61
TRPS1-201ENST00000220888 OR6P1Q8NGX9 317 aa11.25□□□□□ -0.61
TRPS1-201ENST00000220888 SERPINI1Q99574 410 aa11.25□□□□□ -0.61
TRPS1-201ENST00000220888 CYP26B1Q9NR63 512 aa11.25□□□□□ -0.61
TRPS1-201ENST00000220888 RWDD2AQ9UIY3 292 aa11.25□□□□□ -0.61
TRPS1-201ENST00000220888 PACSIN2Q9UNF0 486 aaPredicted RBP11.25□□□□□ -0.61
TRPS1-201ENST00000220888 PASD1Q8IV76 773 aa11.25□□□□□ -0.61
TRPS1-201ENST00000220888 RSPH10B2B2RC85 870 aa11.25□□□□□ -0.61
TRPS1-201ENST00000220888 RSPH10BP0C881 870 aa11.25□□□□□ -0.61
TRPS1-201ENST00000220888 CYP2D6P10635 497 aa11.25□□□□□ -0.61
TRPS1-201ENST00000220888 PLS3P13797 630 aa11.25□□□□□ -0.61
TRPS1-201ENST00000220888 MAP4P27816 1152 aaKnown RBP11.25□□□□□ -0.61
TRPS1-201ENST00000220888 SMARCA1P28370 1054 aa11.25□□□□□ -0.61
TRPS1-201ENST00000220888 SH3BGRP55822 239 aaPredicted RBP11.25□□□□□ -0.61
TRPS1-201ENST00000220888 LRRC37BQ96QE4 947 aa11.25□□□□□ -0.61
TRPS1-201ENST00000220888 CNOT8Q9UFF9 292 aaKnown RBP11.25□□□□□ -0.61
TRPS1-201ENST00000220888 TSR3Q9UJK0 312 aaKnown RBP11.25□□□□□ -0.61
TRPS1-201ENST00000220888 E2F6O75461 281 aa11.24□□□□□ -0.61
TRPS1-201ENST00000220888 HSD17B4P51659 736 aa11.24□□□□□ -0.61
TRPS1-201ENST00000220888 AP3M2P53677 418 aa11.24□□□□□ -0.61
TRPS1-201ENST00000220888 PSMC1P62191 440 aaKnown RBP11.24□□□□□ -0.61
TRPS1-201ENST00000220888 KIF23Q02241 960 aaPredicted RBP11.24□□□□□ -0.61
TRPS1-201ENST00000220888 MFN1Q8IWA4 741 aa11.24□□□□□ -0.61
TRPS1-201ENST00000220888 POLR3CQ9BUI4 534 aaPredicted RBP11.24□□□□□ -0.61
TRPS1-201ENST00000220888 CHCHD3Q9NX63 227 aaKnown RBP11.24□□□□□ -0.61
TRPS1-201ENST00000220888 ANAPC7Q9UJX3 599 aa11.24□□□□□ -0.61
TRPS1-201ENST00000220888 PCDHA10Q9Y5I2 948 aa11.24□□□□□ -0.61
TRPS1-201ENST00000220888 PTCH1Q13635 1447 aa11.24□□□□□ -0.61
TRPS1-201ENST00000220888 DCDC2CA8MYV0 355 aa11.24□□□□□ -0.61
TRPS1-201ENST00000220888 FTCDO95954 541 aa11.24□□□□□ -0.61
TRPS1-201ENST00000220888 GCLMP48507 274 aa11.24□□□□□ -0.61
TRPS1-201ENST00000220888 ARHGEF7Q14155 803 aa11.24□□□□□ -0.61
TRPS1-201ENST00000220888 ZKSCAN8Q15776 578 aaPredicted RBP11.24□□□□□ -0.61
TRPS1-201ENST00000220888 HEATR6Q6AI08 1181 aaKnown RBP11.24□□□□□ -0.61
TRPS1-201ENST00000220888 TRIM68Q6AZZ1 485 aa11.24□□□□□ -0.61
TRPS1-201ENST00000220888 OOSP2Q86WS3 158 aa11.24□□□□□ -0.61
TRPS1-201ENST00000220888 SEPT5Q99719 369 aaPredicted RBP11.24□□□□□ -0.61
TRPS1-201ENST00000220888 MXD3Q9BW11 206 aa11.24□□□□□ -0.61
TRPS1-201ENST00000220888 TEX13BQ9BXU2 312 aa11.24□□□□□ -0.61
TRPS1-201ENST00000220888 OLFML3Q9NRN5 406 aa11.24□□□□□ -0.61
TRPS1-201ENST00000220888 TBK1Q9UHD2 729 aa11.24□□□□□ -0.61
TRPS1-201ENST00000220888 DNAJC12Q9UKB3 198 aa11.24□□□□□ -0.61
TRPS1-201ENST00000220888 L3MBTL1Q9Y468 752 aa11.24□□□□□ -0.61
TRPS1-201ENST00000220888 PZPP20742 1482 aa11.24□□□□□ -0.61
TRPS1-201ENST00000220888 ARHGAP10A1A4S6 786 aa11.24□□□□□ -0.61
TRPS1-201ENST00000220888 KPNA7A9QM74 516 aa11.24□□□□□ -0.61
TRPS1-201ENST00000220888 ARL4CP56559 192 aa11.24□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms