RNA–Protein interactions for RNA: ENST00000219084.10

CHD9-201, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 1 (best)

Gene CHD9, Length 8,739 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-201ENST00000219084 PRELPP51888 382 aa4.71□□□□□ -1.66
CHD9-201ENST00000219084 NR1I3Q14994 352 aa4.71□□□□□ -1.66
CHD9-201ENST00000219084 STILQ15468 1287 aa4.71□□□□□ -1.66
CHD9-201ENST00000219084 HIBCHQ6NVY1 386 aaPredicted RBP4.71□□□□□ -1.66
CHD9-201ENST00000219084 MIGA2Q7L4E1 593 aa4.71□□□□□ -1.66
CHD9-201ENST00000219084 UNC5CLQ8IV45 518 aa4.71□□□□□ -1.66
CHD9-201ENST00000219084 RHOT1Q8IXI2 618 aa4.71□□□□□ -1.66
CHD9-201ENST00000219084 ZNF710Q8N1W2 664 aa4.71□□□□□ -1.66
CHD9-201ENST00000219084 MAML1Q92585 1016 aa4.71□□□□□ -1.66
CHD9-201ENST00000219084 SLC38A10Q9HBR0 1119 aa4.71□□□□□ -1.66
CHD9-201ENST00000219084 ST7Q9NRC1 585 aa4.71□□□□□ -1.66
CHD9-201ENST00000219084 PARVAQ9NVD7 372 aa4.71□□□□□ -1.66
CHD9-201ENST00000219084 UBR1Q8IWV7 1749 aa4.7□□□□□ -1.66
CHD9-201ENST00000219084 TESPA1A2RU30 521 aaPredicted RBP4.7□□□□□ -1.66
CHD9-201ENST00000219084 PHF2O75151 1096 aa4.7□□□□□ -1.66
CHD9-201ENST00000219084 SERPINB9P50453 376 aa4.7□□□□□ -1.66
CHD9-201ENST00000219084 KRT76Q01546 638 aa4.7□□□□□ -1.66
CHD9-201ENST00000219084 TRIM28Q13263 835 aaKnown RBP4.7□□□□□ -1.66
CHD9-201ENST00000219084 NUGGCQ68CJ6 796 aa4.7□□□□□ -1.66
CHD9-201ENST00000219084 CAPRIN2Q6IMN6 1127 aaKnown RBP4.7□□□□□ -1.66
CHD9-201ENST00000219084 TRAPPC11Q7Z392 1133 aa4.7□□□□□ -1.66
CHD9-201ENST00000219084 CCDC138Q96M89 665 aa4.7□□□□□ -1.66
CHD9-201ENST00000219084 SEPT9Q9UHD8 586 aaPredicted RBP4.7□□□□□ -1.66
CHD9-201ENST00000219084 BLOC1S6Q9UL45 172 aa4.7□□□□□ -1.66
CHD9-201ENST00000219084 NUB1Q9Y5A7 615 aa4.7□□□□□ -1.66
CHD9-201ENST00000219084 PCDHB6Q9Y5E3 794 aa4.7□□□□□ -1.66
CHD9-201ENST00000219084 SLIT3O75094 1523 aa4.7□□□□□ -1.66
CHD9-201ENST00000219084 TMEM247A6NEH6 219 aa4.7□□□□□ -1.66
CHD9-201ENST00000219084 SRRM3A6NNA2 597 aaPredicted RBP4.7□□□□□ -1.66
CHD9-201ENST00000219084 PPEF1O14829 653 aaPredicted RBP4.7□□□□□ -1.66
CHD9-201ENST00000219084 MDH1P40925 334 aaKnown RBP4.7□□□□□ -1.66
CHD9-201ENST00000219084 AP1B1Q10567 949 aa4.7□□□□□ -1.66
CHD9-201ENST00000219084 BEND6Q5SZJ8 279 aaPredicted RBP4.7□□□□□ -1.66
CHD9-201ENST00000219084 CYFIP1Q7L576 1253 aa4.7□□□□□ -1.66
CHD9-201ENST00000219084 CDKL3Q8IVW4 592 aaPredicted RBP4.7□□□□□ -1.66
CHD9-201ENST00000219084 NLGN1Q8N2Q7 840 aa4.7□□□□□ -1.66
CHD9-201ENST00000219084 MMGT1Q8N4V1 131 aa4.7□□□□□ -1.66
CHD9-201ENST00000219084 MRRFQ96E11 262 aaKnown RBP4.7□□□□□ -1.66
CHD9-201ENST00000219084 KDM4CQ9H3R0 1056 aa4.7□□□□□ -1.66
CHD9-201ENST00000219084 TRIM45Q9H8W5 580 aaPredicted RBP4.7□□□□□ -1.66
CHD9-201ENST00000219084 NOD1Q9Y239 953 aa4.7□□□□□ -1.66
CHD9-201ENST00000219084 FRMPD2Q68DX3 1309 aaPredicted RBP4.7□□□□□ -1.66
CHD9-201ENST00000219084 CRB1P82279 1406 aa4.7□□□□□ -1.66
CHD9-201ENST00000219084 A0A1B0GW55 424 aa4.7□□□□□ -1.66
CHD9-201ENST00000219084 CFAP69A5D8W1 941 aa4.7□□□□□ -1.66
CHD9-201ENST00000219084 LRRIQ4A6NIV6 560 aa4.7□□□□□ -1.66
CHD9-201ENST00000219084 DUX4L2P0CJ85 424 aa4.7□□□□□ -1.66
CHD9-201ENST00000219084 DUX4L3P0CJ86 424 aa4.7□□□□□ -1.66
CHD9-201ENST00000219084 DUX4L4P0CJ87 422 aa4.7□□□□□ -1.66
CHD9-201ENST00000219084 DUX4L5P0CJ88 424 aa4.7□□□□□ -1.66
CHD9-201ENST00000219084 DUX4L6P0CJ89 424 aa4.7□□□□□ -1.66
CHD9-201ENST00000219084 DUX4L7P0CJ90 424 aa4.7□□□□□ -1.66
CHD9-201ENST00000219084 ITIH2P19823 946 aa4.7□□□□□ -1.66
CHD9-201ENST00000219084 IFNA8P32881 189 aa4.7□□□□□ -1.66
CHD9-201ENST00000219084 RCN2Q14257 317 aa4.7□□□□□ -1.66
CHD9-201ENST00000219084 PSMD6Q15008 389 aa4.7□□□□□ -1.66
CHD9-201ENST00000219084 IQCB1Q15051 598 aa4.7□□□□□ -1.66
CHD9-201ENST00000219084 SLC18A3Q16572 532 aa4.7□□□□□ -1.66
CHD9-201ENST00000219084 LRRC24Q50LG9 513 aa4.7□□□□□ -1.66
CHD9-201ENST00000219084 C16orf89Q6UX73 402 aa4.7□□□□□ -1.66
CHD9-201ENST00000219084 DNAJC10Q8IXB1 793 aa4.7□□□□□ -1.66
CHD9-201ENST00000219084 RCOR2Q8IZ40 523 aa4.7□□□□□ -1.66
CHD9-201ENST00000219084 LARGE2Q8N3Y3 721 aa4.7□□□□□ -1.66
CHD9-201ENST00000219084 MSL3Q8N5Y2 521 aaKnown RBP4.7□□□□□ -1.66
CHD9-201ENST00000219084 FGD4Q96M96 766 aa4.7□□□□□ -1.66
CHD9-201ENST00000219084 STK33Q9BYT3 514 aa4.7□□□□□ -1.66
CHD9-201ENST00000219084 COA1Q9GZY4 146 aa4.7□□□□□ -1.66
CHD9-201ENST00000219084 ZKSCAN7Q9P0L1 754 aaPredicted RBP4.7□□□□□ -1.66
CHD9-201ENST00000219084 PDP2Q9P2J9 529 aa4.7□□□□□ -1.66
CHD9-201ENST00000219084 DUX4Q9UBX2 424 aa4.7□□□□□ -1.66
CHD9-201ENST00000219084 UTYO14607 1347 aa4.7□□□□□ -1.66
CHD9-201ENST00000219084 DDX39AO00148 427 aaKnown RBP4.7□□□□□ -1.66
CHD9-201ENST00000219084 O00370 1275 aa4.7□□□□□ -1.66
CHD9-201ENST00000219084 GNGT2O14610 69 aa4.7□□□□□ -1.66
CHD9-201ENST00000219084 RIMBP2O15034 1052 aa4.7□□□□□ -1.66
CHD9-201ENST00000219084 FAM107AO95990 144 aa4.7□□□□□ -1.66
CHD9-201ENST00000219084 PSMA2P25787 234 aa4.7□□□□□ -1.66
CHD9-201ENST00000219084 CRKLP46109 303 aaKnown RBP4.7□□□□□ -1.66
CHD9-201ENST00000219084 PPM1FP49593 454 aaPredicted RBP4.7□□□□□ -1.66
CHD9-201ENST00000219084 COPS2P61201 443 aa4.7□□□□□ -1.66
CHD9-201ENST00000219084 MAGOHP61326 146 aaKnown RBP4.7□□□□□ -1.66
CHD9-201ENST00000219084 EXOSC10Q01780 885 aaKnown RBP4.7□□□□□ -1.66
CHD9-201ENST00000219084 CENPCQ03188 943 aa4.7□□□□□ -1.66
CHD9-201ENST00000219084 MORF4L2Q15014 288 aa4.7□□□□□ -1.66
CHD9-201ENST00000219084 P3H1Q32P28 736 aa4.7□□□□□ -1.66
CHD9-201ENST00000219084 FAM83BQ5T0W9 1011 aa4.7□□□□□ -1.66
CHD9-201ENST00000219084 NYAP1Q6ZVC0 841 aa4.7□□□□□ -1.66
CHD9-201ENST00000219084 TRMT1LQ7Z2T5 733 aaKnown RBP4.7□□□□□ -1.66
CHD9-201ENST00000219084 TMEM35BQ8NCS4 154 aa4.7□□□□□ -1.66
CHD9-201ENST00000219084 SH3TC2Q8TF17 1288 aa4.7□□□□□ -1.66
CHD9-201ENST00000219084 MMS19Q96T76 1030 aa4.7□□□□□ -1.66
CHD9-201ENST00000219084 MPP6Q9NZW5 540 aa4.7□□□□□ -1.66
CHD9-201ENST00000219084 WDR35Q9P2L0 1181 aa4.7□□□□□ -1.66
CHD9-201ENST00000219084 FBXO40Q9UH90 709 aa4.7□□□□□ -1.66
CHD9-201ENST00000219084 MTO1Q9Y2Z2 717 aaKnown RBP4.7□□□□□ -1.66
CHD9-201ENST00000219084 TECPR2O15040 1411 aa4.7□□□□□ -1.66
CHD9-201ENST00000219084 ADORA1P30542 326 aa4.7□□□□□ -1.66
CHD9-201ENST00000219084 NPEPPSP55786 919 aa4.7□□□□□ -1.66
CHD9-201ENST00000219084 ABCE1P61221 599 aaKnown RBP4.7□□□□□ -1.66
CHD9-201ENST00000219084 COASYQ13057 564 aa4.7□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms