RNA–Protein interactions for RNA: ENST00000218348.7

USP11-201, Transcript of ubiquitin specific peptidase 11, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene USP11, Length 3,338 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP11-201ENST00000218348 PEX3P56589 373 aa10.87□□□□□ -0.67
USP11-201ENST00000218348 SLC7A5Q01650 507 aa10.87□□□□□ -0.67
USP11-201ENST00000218348 KIAA0753Q2KHM9 967 aa10.87□□□□□ -0.67
USP11-201ENST00000218348 TTC31Q49AM3 519 aaPredicted RBP10.87□□□□□ -0.67
USP11-201ENST00000218348 XKR9Q5GH70 373 aa10.87□□□□□ -0.67
USP11-201ENST00000218348 FAM186BQ8IYM0 893 aa10.87□□□□□ -0.67
USP11-201ENST00000218348 NACC1Q96RE7 527 aa10.87□□□□□ -0.67
USP11-201ENST00000218348 ARFGAP3Q9NP61 516 aa10.87□□□□□ -0.67
USP11-201ENST00000218348 HYOU1Q9Y4L1 999 aa10.87□□□□□ -0.67
USP11-201ENST00000218348 A0A0G2JLL6 359 aaPredicted RBP10.87□□□□□ -0.67
USP11-201ENST00000218348 ZBED4O75132 1171 aa10.87□□□□□ -0.67
USP11-201ENST00000218348 ASIC2Q16515 512 aa10.87□□□□□ -0.67
USP11-201ENST00000218348 PRRT2Q7Z6L0 340 aaPredicted RBP10.87□□□□□ -0.67
USP11-201ENST00000218348 GPR161Q8N6U8 529 aaKnown RBP10.87□□□□□ -0.67
USP11-201ENST00000218348 GOLGA6L1Q8N7Z2 621 aa10.87□□□□□ -0.67
USP11-201ENST00000218348 CEP112Q8N8E3 955 aa10.87□□□□□ -0.67
USP11-201ENST00000218348 KIAA1683Q9H0B3 1180 aa10.87□□□□□ -0.67
USP11-201ENST00000218348 WDR46O15213 610 aaKnown RBP10.87□□□□□ -0.67
USP11-201ENST00000218348 PPARDQ03181 441 aa10.87□□□□□ -0.67
USP11-201ENST00000218348 PTK2Q05397 1052 aa10.87□□□□□ -0.67
USP11-201ENST00000218348 MAP9Q49MG5 647 aa10.87□□□□□ -0.67
USP11-201ENST00000218348 CC2D1AQ6P1N0 951 aaPredicted RBP10.87□□□□□ -0.67
USP11-201ENST00000218348 HS2ST1Q7LGA3 356 aa10.87□□□□□ -0.67
USP11-201ENST00000218348 CCDC170Q8IYT3 715 aa10.87□□□□□ -0.67
USP11-201ENST00000218348 CCDC127Q96BQ5 260 aa10.87□□□□□ -0.67
USP11-201ENST00000218348 CEP63Q96MT8 703 aa10.87□□□□□ -0.67
USP11-201ENST00000218348 ABCB6Q9NP58 842 aa10.87□□□□□ -0.67
USP11-201ENST00000218348 UCHL3P15374 230 aa10.86□□□□□ -0.67
USP11-201ENST00000218348 PON1P27169 355 aa10.86□□□□□ -0.67
USP11-201ENST00000218348 DLG4P78352 724 aa10.86□□□□□ -0.67
USP11-201ENST00000218348 BMS1Q14692 1282 aaKnown RBP10.86□□□□□ -0.67
USP11-201ENST00000218348 WDR78Q5VTH9 848 aa10.86□□□□□ -0.67
USP11-201ENST00000218348 HGSNATQ68CP4 663 aa10.86□□□□□ -0.67
USP11-201ENST00000218348 GPAT2Q6NUI2 795 aa10.86□□□□□ -0.67
USP11-201ENST00000218348 DAW1Q8N136 415 aa10.86□□□□□ -0.67
USP11-201ENST00000218348 RABGGTAQ92696 567 aa10.86□□□□□ -0.67
USP11-201ENST00000218348 SLC38A10Q9HBR0 1119 aa10.86□□□□□ -0.67
USP11-201ENST00000218348 GBA2Q9HCG7 927 aaPredicted RBP10.86□□□□□ -0.67
USP11-201ENST00000218348 TYW1Q9NV66 732 aaKnown RBP10.86□□□□□ -0.67
USP11-201ENST00000218348 PPP1R9AQ9ULJ8 1098 aa10.86□□□□□ -0.67
USP11-201ENST00000218348 ZNF236Q9UL36 1845 aa10.86□□□□□ -0.67
USP11-201ENST00000218348 FRMD3A2A2Y4 597 aa10.86□□□□□ -0.67
USP11-201ENST00000218348 VWA5AO00534 786 aa10.86□□□□□ -0.67
USP11-201ENST00000218348 BACH1O14867 736 aa10.86□□□□□ -0.67
USP11-201ENST00000218348 TACC1O75410 805 aa10.86□□□□□ -0.67
USP11-201ENST00000218348 CELF2O95319 508 aaKnown RBP10.86□□□□□ -0.67
USP11-201ENST00000218348 ABCB4P21439 1286 aa10.86□□□□□ -0.67
USP11-201ENST00000218348 KLRC1P26715 233 aa10.86□□□□□ -0.67
USP11-201ENST00000218348 PPP2R5CQ13362 524 aa10.86□□□□□ -0.67
USP11-201ENST00000218348 EPHA7Q15375 998 aa10.86□□□□□ -0.67
USP11-201ENST00000218348 ZKSCAN8Q15776 578 aaPredicted RBP10.86□□□□□ -0.67
USP11-201ENST00000218348 COBLL1Q53SF7 1204 aa10.86□□□□□ -0.67
USP11-201ENST00000218348 RASAL3Q86YV0 1011 aa10.86□□□□□ -0.67
USP11-201ENST00000218348 SAAL1Q96ER3 474 aa10.86□□□□□ -0.67
USP11-201ENST00000218348 CBWD1Q9BRT8 395 aa10.86□□□□□ -0.67
USP11-201ENST00000218348 CEP72Q9P209 647 aa10.86□□□□□ -0.67
USP11-201ENST00000218348 ADAMTS5Q9UNA0 930 aa10.86□□□□□ -0.67
USP11-201ENST00000218348 ADGRA2Q96PE1 1338 aa10.86□□□□□ -0.67
USP11-201ENST00000218348 RPL13P26373 211 aaKnown RBP10.86□□□□□ -0.67
USP11-201ENST00000218348 AMPD2Q01433 879 aa10.86□□□□□ -0.67
USP11-201ENST00000218348 PPATQ06203 517 aa10.86□□□□□ -0.67
USP11-201ENST00000218348 PGM5Q15124 567 aa10.86□□□□□ -0.67
USP11-201ENST00000218348 LONRF2Q1L5Z9 754 aa10.86□□□□□ -0.67
USP11-201ENST00000218348 CBWD6Q4V339 395 aa10.86□□□□□ -0.67
USP11-201ENST00000218348 CBWD3Q5JTY5 395 aa10.86□□□□□ -0.67
USP11-201ENST00000218348 CBWD5Q5RIA9 395 aa10.86□□□□□ -0.67
USP11-201ENST00000218348 ZNF720Q7Z2F6 126 aa10.86□□□□□ -0.67
USP11-201ENST00000218348 ANKRD13AQ8IZ07 590 aa10.86□□□□□ -0.67
USP11-201ENST00000218348 TUFT1Q9NNX1 390 aa10.86□□□□□ -0.67
USP11-201ENST00000218348 ZSWIM8A7E2V4 1837 aa10.85□□□□□ -0.67
USP11-201ENST00000218348 A0A1W2PQJ5 194 aa10.85□□□□□ -0.67
USP11-201ENST00000218348 CCNE2O96020 404 aa10.85□□□□□ -0.67
USP11-201ENST00000218348 GCLMP48507 274 aa10.85□□□□□ -0.67
USP11-201ENST00000218348 INHBEP58166 350 aa10.85□□□□□ -0.67
USP11-201ENST00000218348 TRAF1Q13077 416 aa10.85□□□□□ -0.67
USP11-201ENST00000218348 PPIL2Q13356 520 aa10.85□□□□□ -0.67
USP11-201ENST00000218348 MFSD4BQ5TF39 518 aa10.85□□□□□ -0.67
USP11-201ENST00000218348 MCTP2Q6DN12 878 aa10.85□□□□□ -0.67
USP11-201ENST00000218348 TRAPPC11Q7Z392 1133 aa10.85□□□□□ -0.67
USP11-201ENST00000218348 ZNF280CQ8ND82 737 aa10.85□□□□□ -0.67
USP11-201ENST00000218348 HDAC7Q8WUI4 952 aa10.85□□□□□ -0.67
USP11-201ENST00000218348 ITFG2Q969R8 447 aa10.85□□□□□ -0.67
USP11-201ENST00000218348 SLC35C1Q96A29 364 aa10.85□□□□□ -0.67
USP11-201ENST00000218348 ZNF668Q96K58 619 aaPredicted RBP10.85□□□□□ -0.67
USP11-201ENST00000218348 PAGR1Q9BTK6 254 aa10.85□□□□□ -0.67
USP11-201ENST00000218348 GBP3Q9H0R5 595 aa10.85□□□□□ -0.67
USP11-201ENST00000218348 AGO4Q9HCK5 861 aaKnown RBP10.85□□□□□ -0.67
USP11-201ENST00000218348 ACP6Q9NPH0 428 aa10.85□□□□□ -0.67
USP11-201ENST00000218348 MGAMO43451 1857 aa10.85□□□□□ -0.67
USP11-201ENST00000218348 PDXKO00764 312 aa10.85□□□□□ -0.67
USP11-201ENST00000218348 PLA2G6O60733 806 aa10.85□□□□□ -0.67
USP11-201ENST00000218348 PALMO75781 387 aa10.85□□□□□ -0.67
USP11-201ENST00000218348 TBC1D8O95759 1140 aa10.85□□□□□ -0.67
USP11-201ENST00000218348 YWHABP31946 246 aaKnown RBP10.85□□□□□ -0.67
USP11-201ENST00000218348 PLA2G4AP47712 749 aa10.85□□□□□ -0.67
USP11-201ENST00000218348 BACE1P56817 501 aa10.85□□□□□ -0.67
USP11-201ENST00000218348 CCDC181Q5TID7 509 aa10.85□□□□□ -0.67
USP11-201ENST00000218348 EPM2AIP1Q7L775 607 aaPredicted RBP10.85□□□□□ -0.67
USP11-201ENST00000218348 ZNF571Q7Z3V5 609 aaPredicted RBP10.85□□□□□ -0.67
USP11-201ENST00000218348 POP1Q99575 1024 aaKnown RBP10.85□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms