RNA–Protein interactions for RNA: ENST00000217133.1

TUBB1-201, Transcript of tubulin beta 1 class VI, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TUBB1, Length 3,496 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB1-201ENST00000217133 CDK8P49336 464 aa10.45□□□□□ -0.74
TUBB1-201ENST00000217133 NPEPPSP55786 919 aa10.45□□□□□ -0.74
TUBB1-201ENST00000217133 NCALDP61601 193 aa10.45□□□□□ -0.74
TUBB1-201ENST00000217133 RPS8P62241 208 aaKnown RBP10.45□□□□□ -0.74
TUBB1-201ENST00000217133 GBP7Q8N8V2 638 aaPredicted RBP10.45□□□□□ -0.74
TUBB1-201ENST00000217133 UPF1Q92900 1129 aaKnown RBP eCLIP10.45□□□□□ -0.74
TUBB1-201ENST00000217133 SAAL1Q96ER3 474 aa10.45□□□□□ -0.74
TUBB1-201ENST00000217133 CARD9Q9H257 536 aa10.45□□□□□ -0.74
TUBB1-201ENST00000217133 TMOD4Q9NZQ9 345 aa10.45□□□□□ -0.74
TUBB1-201ENST00000217133 PARP2Q9UGN5 583 aa10.45□□□□□ -0.74
TUBB1-201ENST00000217133 POLRMTO00411 1230 aaKnown RBP10.45□□□□□ -0.74
TUBB1-201ENST00000217133 KIF3CO14782 793 aa10.45□□□□□ -0.74
TUBB1-201ENST00000217133 LMNB1P20700 586 aa10.45□□□□□ -0.74
TUBB1-201ENST00000217133 ZNF131P52739 623 aa10.45□□□□□ -0.74
TUBB1-201ENST00000217133 MAPK7Q13164 816 aa10.45□□□□□ -0.74
TUBB1-201ENST00000217133 CEP95Q96GE4 821 aa10.45□□□□□ -0.74
TUBB1-201ENST00000217133 KIF9Q9HAQ2 790 aa10.45□□□□□ -0.74
TUBB1-201ENST00000217133 METTL14Q9HCE5 456 aaKnown RBP10.45□□□□□ -0.74
TUBB1-201ENST00000217133 ERVK-5Q9HDB9 667 aa10.45□□□□□ -0.74
TUBB1-201ENST00000217133 MLXIPLQ9NP71 852 aa10.45□□□□□ -0.74
TUBB1-201ENST00000217133 ZDHHC18Q9NUE0 388 aa10.45□□□□□ -0.74
TUBB1-201ENST00000217133 WDR3Q9UNX4 943 aaKnown RBP eCLIP10.45□□□□□ -0.74
TUBB1-201ENST00000217133 CACNA1SQ13698 1873 aa10.45□□□□□ -0.74
TUBB1-201ENST00000217133 TULP1O00294 542 aaPredicted RBP10.45□□□□□ -0.74
TUBB1-201ENST00000217133 EVI5O60447 810 aa10.45□□□□□ -0.74
TUBB1-201ENST00000217133 CYP11B2P19099 503 aa10.45□□□□□ -0.74
TUBB1-201ENST00000217133 TNFAIP3P21580 790 aa10.45□□□□□ -0.74
TUBB1-201ENST00000217133 POU5F1Q01860 360 aaKnown RBP10.45□□□□□ -0.74
TUBB1-201ENST00000217133 KLRC3Q07444 240 aa10.45□□□□□ -0.74
TUBB1-201ENST00000217133 FAM167BQ9BTA0 163 aa10.45□□□□□ -0.74
TUBB1-201ENST00000217133 TXLNGYQ9BZA5 131 aa10.45□□□□□ -0.74
TUBB1-201ENST00000217133 ADAM7Q9H2U9 754 aa10.45□□□□□ -0.74
TUBB1-201ENST00000217133 KIAA0391O15091 583 aaKnown RBP10.44□□□□□ -0.74
TUBB1-201ENST00000217133 CLIC2O15247 247 aa10.44□□□□□ -0.74
TUBB1-201ENST00000217133 EIF6P56537 245 aaKnown RBP10.44□□□□□ -0.74
TUBB1-201ENST00000217133 COPS2P61201 443 aa10.44□□□□□ -0.74
TUBB1-201ENST00000217133 GSTO1P78417 241 aa10.44□□□□□ -0.74
TUBB1-201ENST00000217133 CLUL1Q15846 466 aa10.44□□□□□ -0.74
TUBB1-201ENST00000217133 KNOP1Q1ED39 458 aaKnown RBP10.44□□□□□ -0.74
TUBB1-201ENST00000217133 CCDC105Q8IYK2 499 aa10.44□□□□□ -0.74
TUBB1-201ENST00000217133 C18orf8Q96DM3 657 aa10.44□□□□□ -0.74
TUBB1-201ENST00000217133 GPR101Q96P66 508 aaPredicted RBP10.44□□□□□ -0.74
TUBB1-201ENST00000217133 TRIM7Q9C029 511 aa10.44□□□□□ -0.74
TUBB1-201ENST00000217133 COL5A3P25940 1745 aaPredicted RBP10.44□□□□□ -0.74
TUBB1-201ENST00000217133 NUP98P52948 1817 aa10.44□□□□□ -0.74
TUBB1-201ENST00000217133 EIF4E1BA6NMX2 242 aaKnown RBP10.44□□□□□ -0.74
TUBB1-201ENST00000217133 hCG_1984214I3L0E3 225 aa10.44□□□□□ -0.74
TUBB1-201ENST00000217133 LDHCP07864 332 aa10.44□□□□□ -0.74
TUBB1-201ENST00000217133 RARAP10276 462 aa10.44□□□□□ -0.74
TUBB1-201ENST00000217133 GBP1P32455 592 aa10.44□□□□□ -0.74
TUBB1-201ENST00000217133 TAF11Q15544 211 aa10.44□□□□□ -0.74
TUBB1-201ENST00000217133 CNGA2Q16280 664 aa10.44□□□□□ -0.74
TUBB1-201ENST00000217133 SPICE1Q8N0Z3 855 aa10.44□□□□□ -0.74
TUBB1-201ENST00000217133 NLGN1Q8N2Q7 840 aa10.44□□□□□ -0.74
TUBB1-201ENST00000217133 UBL4BQ8N7F7 174 aa10.44□□□□□ -0.74
TUBB1-201ENST00000217133 ZNF713Q8N859 430 aaPredicted RBP10.44□□□□□ -0.74
TUBB1-201ENST00000217133 NEDD1Q8NHV4 660 aa10.44□□□□□ -0.74
TUBB1-201ENST00000217133 KCNV2Q8TDN2 545 aa10.44□□□□□ -0.74
TUBB1-201ENST00000217133 L3MBTL3Q96JM7 780 aaPredicted RBP10.44□□□□□ -0.74
TUBB1-201ENST00000217133 ANKRD2Q9GZV1 360 aa10.44□□□□□ -0.74
TUBB1-201ENST00000217133 EPB41L4BQ9H329 900 aa10.44□□□□□ -0.74
TUBB1-201ENST00000217133 TTC7AQ9ULT0 858 aaPredicted RBP10.44□□□□□ -0.74
TUBB1-201ENST00000217133 LY75O60449 1722 aa10.44□□□□□ -0.74
TUBB1-201ENST00000217133 ENO4A6NNW6 628 aa10.43□□□□□ -0.74
TUBB1-201ENST00000217133 AKAP3O75969 853 aa10.43□□□□□ -0.74
TUBB1-201ENST00000217133 ZBTB48P10074 688 aaPredicted RBP10.43□□□□□ -0.74
TUBB1-201ENST00000217133 ATP2A2P16615 1042 aaKnown RBP10.43□□□□□ -0.74
TUBB1-201ENST00000217133 PLCG2P16885 1265 aa10.43□□□□□ -0.74
TUBB1-201ENST00000217133 CASP5P51878 434 aa10.43□□□□□ -0.74
TUBB1-201ENST00000217133 CALCOCO2Q13137 446 aa10.43□□□□□ -0.74
TUBB1-201ENST00000217133 PABPC4Q13310 644 aaKnown RBP eCLIP10.43□□□□□ -0.74
TUBB1-201ENST00000217133 EPHA7Q15375 998 aa10.43□□□□□ -0.74
TUBB1-201ENST00000217133 SF3B3Q15393 1217 aaKnown RBP10.43□□□□□ -0.74
TUBB1-201ENST00000217133 SEL1L2Q5TEA6 688 aa10.43□□□□□ -0.74
TUBB1-201ENST00000217133 TRIM68Q6AZZ1 485 aa10.43□□□□□ -0.74
TUBB1-201ENST00000217133 ERICH1Q86X53 443 aa10.43□□□□□ -0.74
TUBB1-201ENST00000217133 SFR1Q86XK3 245 aa10.43□□□□□ -0.74
TUBB1-201ENST00000217133 LRRC47Q8N1G4 583 aaKnown RBP10.43□□□□□ -0.74
TUBB1-201ENST00000217133 GDAP1Q8TB36 358 aa10.43□□□□□ -0.74
TUBB1-201ENST00000217133 HAS1Q92839 578 aa10.43□□□□□ -0.74
TUBB1-201ENST00000217133 ARHGEF2Q92974 986 aaKnown RBP10.43□□□□□ -0.74
TUBB1-201ENST00000217133 RUNDC3BQ96NL0 473 aa10.43□□□□□ -0.74
TUBB1-201ENST00000217133 PLCD4Q9BRC7 762 aa10.43□□□□□ -0.74
TUBB1-201ENST00000217133 YIPF3Q9GZM5 350 aa10.43□□□□□ -0.74
TUBB1-201ENST00000217133 CTTNBP2NLQ9P2B4 639 aa10.43□□□□□ -0.74
TUBB1-201ENST00000217133 CNOT7Q9UIV1 285 aaKnown RBP10.43□□□□□ -0.74
TUBB1-201ENST00000217133 PTPN22Q9Y2R2 807 aa10.43□□□□□ -0.74
TUBB1-201ENST00000217133 POTEFA5A3E0 1075 aa10.43□□□□□ -0.74
TUBB1-201ENST00000217133 A8MUI8 341 aa10.43□□□□□ -0.74
TUBB1-201ENST00000217133 PODXLO00592 558 aa10.43□□□□□ -0.74
TUBB1-201ENST00000217133 HIP1RO75146 1068 aa10.43□□□□□ -0.74
TUBB1-201ENST00000217133 NR3C1P04150 777 aa10.43□□□□□ -0.74
TUBB1-201ENST00000217133 KRT16P08779 473 aa10.43□□□□□ -0.74
TUBB1-201ENST00000217133 TMEM253P0C7T8 217 aa10.43□□□□□ -0.74
TUBB1-201ENST00000217133 POTEIP0CG38 1075 aa10.43□□□□□ -0.74
TUBB1-201ENST00000217133 CHRNA3P32297 505 aa10.43□□□□□ -0.74
TUBB1-201ENST00000217133 PDE6BP35913 854 aa10.43□□□□□ -0.74
TUBB1-201ENST00000217133 MSH2P43246 934 aa10.43□□□□□ -0.74
TUBB1-201ENST00000217133 PLS1Q14651 629 aa10.43□□□□□ -0.74
TUBB1-201ENST00000217133 POTEGQ6S5H5 508 aa10.43□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms