RNA–Protein interactions for RNA: ENST00000006053.6

CX3CL1-201, Transcript of C-X3-C motif chemokine ligand 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CX3CL1, Length 3,321 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CX3CL1-201ENST00000006053 NEK9Q8TD19 979 aa11.38□□□□□ -0.59
CX3CL1-201ENST00000006053 TAS2R14Q9NYV8 317 aa11.38□□□□□ -0.59
CX3CL1-201ENST00000006053 RGL1Q9NZL6 768 aa11.38□□□□□ -0.59
CX3CL1-201ENST00000006053 BAIAP2L1Q9UHR4 511 aa11.38□□□□□ -0.59
CX3CL1-201ENST00000006053 BCS1LQ9Y276 419 aa11.38□□□□□ -0.59
CX3CL1-201ENST00000006053 RIMBP2O15034 1052 aa11.38□□□□□ -0.59
CX3CL1-201ENST00000006053 RGS16O15492 202 aaPredicted RBP11.38□□□□□ -0.59
CX3CL1-201ENST00000006053 DDX3YO15523 660 aaKnown RBP11.38□□□□□ -0.59
CX3CL1-201ENST00000006053 LRRN2O75325 713 aa11.38□□□□□ -0.59
CX3CL1-201ENST00000006053 VIMP08670 466 aaKnown RBP11.38□□□□□ -0.59
CX3CL1-201ENST00000006053 SPATA31C1P0DKV0 1188 aa11.38□□□□□ -0.59
CX3CL1-201ENST00000006053 NMT1P30419 496 aaKnown RBP11.38□□□□□ -0.59
CX3CL1-201ENST00000006053 PTENP60484 403 aa11.38□□□□□ -0.59
CX3CL1-201ENST00000006053 IRX1P78414 480 aaPredicted RBP11.38□□□□□ -0.59
CX3CL1-201ENST00000006053 IFI35P80217 286 aaPredicted RBP11.38□□□□□ -0.59
CX3CL1-201ENST00000006053 USH1GQ495M9 461 aa11.38□□□□□ -0.59
CX3CL1-201ENST00000006053 ZC2HC1CQ53FD0 456 aaPredicted RBP11.38□□□□□ -0.59
CX3CL1-201ENST00000006053 PIGOQ8TEQ8 1089 aa11.38□□□□□ -0.59
CX3CL1-201ENST00000006053 CCT6BQ92526 530 aa11.38□□□□□ -0.59
CX3CL1-201ENST00000006053 TLCD1Q96CP7 247 aa11.38□□□□□ -0.59
CX3CL1-201ENST00000006053 TBC1D31Q96DN5 1066 aa11.38□□□□□ -0.59
CX3CL1-201ENST00000006053 FAM129AQ9BZQ8 928 aa11.38□□□□□ -0.59
CX3CL1-201ENST00000006053 THAP2Q9H0W7 228 aa11.38□□□□□ -0.59
CX3CL1-201ENST00000006053 TRIM49P0CI25 452 aa11.37□□□□□ -0.59
CX3CL1-201ENST00000006053 TRIM49CP0CI26 452 aa11.37□□□□□ -0.59
CX3CL1-201ENST00000006053 LMNB1P20700 586 aa11.37□□□□□ -0.59
CX3CL1-201ENST00000006053 CYP2J2P51589 502 aa11.37□□□□□ -0.59
CX3CL1-201ENST00000006053 NPEPPSP55786 919 aa11.37□□□□□ -0.59
CX3CL1-201ENST00000006053 INHBEP58166 350 aa11.37□□□□□ -0.59
CX3CL1-201ENST00000006053 GABPAQ06546 454 aa11.37□□□□□ -0.59
CX3CL1-201ENST00000006053 IKQ13123 557 aaPredicted RBP11.37□□□□□ -0.59
CX3CL1-201ENST00000006053 SLC29A2Q14542 456 aa11.37□□□□□ -0.59
CX3CL1-201ENST00000006053 EPM2AIP1Q7L775 607 aaPredicted RBP11.37□□□□□ -0.59
CX3CL1-201ENST00000006053 JAMLQ86YT9 394 aa11.37□□□□□ -0.59
CX3CL1-201ENST00000006053 MYCT1Q8N699 235 aa11.37□□□□□ -0.59
CX3CL1-201ENST00000006053 ANKS4BQ8N8V4 417 aa11.37□□□□□ -0.59
CX3CL1-201ENST00000006053 RDH13Q8NBN7 331 aa11.37□□□□□ -0.59
CX3CL1-201ENST00000006053 SEC14L1Q92503 715 aa11.37□□□□□ -0.59
CX3CL1-201ENST00000006053 ELAC2Q9BQ52 826 aaKnown RBP11.37□□□□□ -0.59
CX3CL1-201ENST00000006053 CHORDC1Q9UHD1 332 aaPredicted RBP11.37□□□□□ -0.59
CX3CL1-201ENST00000006053 INTUQ9ULD6 942 aa11.37□□□□□ -0.59
CX3CL1-201ENST00000006053 NENFQ9UMX5 172 aa11.37□□□□□ -0.59
CX3CL1-201ENST00000006053 IGKV6D-41A0A0C4DH26 115 aa11.37□□□□□ -0.59
CX3CL1-201ENST00000006053 FAM196BA6NMK8 535 aa11.37□□□□□ -0.59
CX3CL1-201ENST00000006053 PPP1R12BO60237 982 aaPredicted RBP11.37□□□□□ -0.59
CX3CL1-201ENST00000006053 FAM13AO94988 1023 aa11.37□□□□□ -0.59
CX3CL1-201ENST00000006053 RPA1P27694 616 aa11.37□□□□□ -0.59
CX3CL1-201ENST00000006053 PLS1Q14651 629 aa11.37□□□□□ -0.59
CX3CL1-201ENST00000006053 COG2Q14746 738 aa11.37□□□□□ -0.59
CX3CL1-201ENST00000006053 KIAA1755Q5JYT7 1200 aa11.37□□□□□ -0.59
CX3CL1-201ENST00000006053 UBAP2Q5T6F2 1119 aaKnown RBP11.37□□□□□ -0.59
CX3CL1-201ENST00000006053 DUPD1Q68J44 220 aa11.37□□□□□ -0.59
CX3CL1-201ENST00000006053 PALB2Q86YC2 1186 aa11.37□□□□□ -0.59
CX3CL1-201ENST00000006053 LRRC34Q8IZ02 419 aa11.37□□□□□ -0.59
CX3CL1-201ENST00000006053 KIRREL3Q8IZU9 778 aa11.37□□□□□ -0.59
CX3CL1-201ENST00000006053 RNF25Q96BH1 459 aaPredicted RBP11.37□□□□□ -0.59
CX3CL1-201ENST00000006053 C18orf8Q96DM3 657 aa11.37□□□□□ -0.59
CX3CL1-201ENST00000006053 INTS9Q9NV88 658 aaKnown RBP11.37□□□□□ -0.59
CX3CL1-201ENST00000006053 CCT8L1PA6NM43 557 aa11.37□□□□□ -0.59
CX3CL1-201ENST00000006053 SKAP2O75563 359 aaPredicted RBP11.37□□□□□ -0.59
CX3CL1-201ENST00000006053 TMEM253P0C7T8 217 aa11.37□□□□□ -0.59
CX3CL1-201ENST00000006053 EZRP15311 586 aaKnown RBP11.37□□□□□ -0.59
CX3CL1-201ENST00000006053 POLD1P28340 1107 aa11.37□□□□□ -0.59
CX3CL1-201ENST00000006053 ZNF76P36508 570 aa11.37□□□□□ -0.59
CX3CL1-201ENST00000006053 SCNN1DP51172 638 aa11.37□□□□□ -0.59
CX3CL1-201ENST00000006053 LLGL1Q15334 1064 aa11.37□□□□□ -0.59
CX3CL1-201ENST00000006053 CCDC38Q502W7 563 aa11.37□□□□□ -0.59
CX3CL1-201ENST00000006053 FAM133BQ5BKY9 247 aaKnown RBP11.37□□□□□ -0.59
CX3CL1-201ENST00000006053 PNMA8AQ86V59 439 aaPredicted RBP11.37□□□□□ -0.59
CX3CL1-201ENST00000006053 TCP11Q8WWU5 503 aa11.37□□□□□ -0.59
CX3CL1-201ENST00000006053 ALG3Q92685 438 aa11.37□□□□□ -0.59
CX3CL1-201ENST00000006053 NAP1L3Q99457 506 aaPredicted RBP11.37□□□□□ -0.59
CX3CL1-201ENST00000006053 P2RX7Q99572 595 aaKnown RBP11.37□□□□□ -0.59
CX3CL1-201ENST00000006053 PRMT1Q99873 361 aaKnown RBP11.37□□□□□ -0.59
CX3CL1-201ENST00000006053 MXD3Q9BW11 206 aa11.37□□□□□ -0.59
CX3CL1-201ENST00000006053 PABPC3Q9H361 631 aaKnown RBP11.37□□□□□ -0.59
CX3CL1-201ENST00000006053 MCM8Q9UJA3 840 aa11.37□□□□□ -0.59
CX3CL1-201ENST00000006053 CCDC169A6NNP5 214 aa11.36□□□□□ -0.59
CX3CL1-201ENST00000006053 TGFB1I1O43294 461 aa11.36□□□□□ -0.59
CX3CL1-201ENST00000006053 CHMP2AO43633 222 aa11.36□□□□□ -0.59
CX3CL1-201ENST00000006053 FGFR4P22455 802 aa11.36□□□□□ -0.59
CX3CL1-201ENST00000006053 ATP2B4P23634 1241 aa11.36□□□□□ -0.59
CX3CL1-201ENST00000006053 ANXA13P27216 316 aa11.36□□□□□ -0.59
CX3CL1-201ENST00000006053 PSMC2P35998 433 aaKnown RBP11.36□□□□□ -0.59
CX3CL1-201ENST00000006053 SPIRE1Q08AE8 756 aa11.36□□□□□ -0.59
CX3CL1-201ENST00000006053 CTTNQ14247 550 aaKnown RBP11.36□□□□□ -0.59
CX3CL1-201ENST00000006053 SHROOM1Q2M3G4 852 aaPredicted RBP11.36□□□□□ -0.59
CX3CL1-201ENST00000006053 TAX1BP1Q86VP1 789 aa11.36□□□□□ -0.59
CX3CL1-201ENST00000006053 CCDC25Q86WR0 208 aa11.36□□□□□ -0.59
CX3CL1-201ENST00000006053 CYP2W1Q8TAV3 490 aa11.36□□□□□ -0.59
CX3CL1-201ENST00000006053 ITFG2Q969R8 447 aa11.36□□□□□ -0.59
CX3CL1-201ENST00000006053 FAM163AQ96GL9 167 aaPredicted RBP11.36□□□□□ -0.59
CX3CL1-201ENST00000006053 GJD4Q96KN9 370 aaPredicted RBP11.36□□□□□ -0.59
CX3CL1-201ENST00000006053 EPB41L4BQ9H329 900 aa11.36□□□□□ -0.59
CX3CL1-201ENST00000006053 SEMA4AQ9H3S1 761 aa11.36□□□□□ -0.59
CX3CL1-201ENST00000006053 ZDHHC18Q9NUE0 388 aa11.36□□□□□ -0.59
CX3CL1-201ENST00000006053 USP40Q9NVE5 1235 aa11.36□□□□□ -0.59
CX3CL1-201ENST00000006053 CTTNBP2NLQ9P2B4 639 aa11.36□□□□□ -0.59
CX3CL1-201ENST00000006053 GGT7Q9UJ14 662 aa11.36□□□□□ -0.59
CX3CL1-201ENST00000006053 RASAL2Q9UJF2 1139 aa11.36□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms