RNA–Protein interactions for RNA: ENSMUST00000030992.12

Rnf4-201, Transcript of E3 ubiquitin-protein ligase RNF4, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Rnf4, Length 2,895 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf4-201ENSMUST00000030992 Gm14525B1AZA0 212 aa13.77□□□□□ -0.2
Rnf4-201ENSMUST00000030992 Gm2012B1B0R1 212 aa13.77□□□□□ -0.2
Rnf4-201ENSMUST00000030992 Scgb2b7D3YYY1 112 aa13.77□□□□□ -0.2
Rnf4-201ENSMUST00000030992 Cpsf2O35218 782 aaKnown RBP13.77□□□□□ -0.2
Rnf4-201ENSMUST00000030992 Pde4aO89084 844 aa13.77□□□□□ -0.2
Rnf4-201ENSMUST00000030992 Calb1P12658 261 aa13.77□□□□□ -0.2
Rnf4-201ENSMUST00000030992 Tatdn3Q3U1C6 294 aa13.77□□□□□ -0.2
Rnf4-201ENSMUST00000030992 Zrsr2Q62377 462 aaKnown RBP13.77□□□□□ -0.2
Rnf4-201ENSMUST00000030992 Gm14819Q62478 212 aa13.77□□□□□ -0.2
Rnf4-201ENSMUST00000030992 Zdhhc24Q6IR37 284 aa13.77□□□□□ -0.2
Rnf4-201ENSMUST00000030992 Xpnpep1Q6P1B1 623 aa13.77□□□□□ -0.2
Rnf4-201ENSMUST00000030992 LdhdQ7TNG8 484 aa13.77□□□□□ -0.2
Rnf4-201ENSMUST00000030992 Tbc1d22bQ80VE5 505 aa13.77□□□□□ -0.2
Rnf4-201ENSMUST00000030992 Ccdc28aQ8CEI3 192 aa13.77□□□□□ -0.2
Rnf4-201ENSMUST00000030992 YwhabQ9CQV8 246 aaKnown RBP13.77□□□□□ -0.2
Rnf4-201ENSMUST00000030992 Serpina9Q9D7D2 418 aa13.77□□□□□ -0.2
Rnf4-201ENSMUST00000030992 Llcfc1Q9D9P8 108 aa13.77□□□□□ -0.2
Rnf4-201ENSMUST00000030992 Pacsin2Q9WVE8 486 aaKnown RBP13.77□□□□□ -0.2
Rnf4-201ENSMUST00000030992 Astn1Q61137 1302 aa13.77□□□□□ -0.2
Rnf4-201ENSMUST00000030992 Slc6a16A0A1L1SR47 742 aa13.77□□□□□ -0.21
Rnf4-201ENSMUST00000030992 Rps6P62754 249 aaKnown RBP13.77□□□□□ -0.21
Rnf4-201ENSMUST00000030992 Map4k1P70218 827 aa13.77□□□□□ -0.21
Rnf4-201ENSMUST00000030992 Cyp11b1Q3TG86 501 aa13.77□□□□□ -0.21
Rnf4-201ENSMUST00000030992 Pdlim7Q3TJD7 457 aa13.77□□□□□ -0.21
Rnf4-201ENSMUST00000030992 Bbof1Q3V079 533 aa13.77□□□□□ -0.21
Rnf4-201ENSMUST00000030992 BC051142Q3V0M8 400 aa13.77□□□□□ -0.21
Rnf4-201ENSMUST00000030992 Fnbp1Q80TY0 616 aa13.77□□□□□ -0.21
Rnf4-201ENSMUST00000030992 Ints2Q80UK8 1198 aa13.77□□□□□ -0.21
Rnf4-201ENSMUST00000030992 3830417A13RikQ8BQJ2 303 aa13.77□□□□□ -0.21
Rnf4-201ENSMUST00000030992 Kbtbd13Q8C828 458 aa13.77□□□□□ -0.21
Rnf4-201ENSMUST00000030992 PhykplQ8R1K4 467 aa13.77□□□□□ -0.21
Rnf4-201ENSMUST00000030992 Hspbp1Q99P31 357 aaKnown RBP13.77□□□□□ -0.21
Rnf4-201ENSMUST00000030992 Six6os1Q9CTN5 574 aa13.77□□□□□ -0.21
Rnf4-201ENSMUST00000030992 Snx10Q9CWT3 201 aa13.77□□□□□ -0.21
Rnf4-201ENSMUST00000030992 Cul1Q9WTX6 776 aa13.77□□□□□ -0.21
Rnf4-201ENSMUST00000030992 Gm28036V9GXJ1 658 aa13.77□□□□□ -0.21
Rnf4-201ENSMUST00000030992 Atp9aO70228 1047 aa13.77□□□□□ -0.21
Rnf4-201ENSMUST00000030992 SnrpfP62307 86 aaKnown RBP13.77□□□□□ -0.21
Rnf4-201ENSMUST00000030992 Rgs9bpQ148R9 237 aa13.77□□□□□ -0.21
Rnf4-201ENSMUST00000030992 Ppp1r7Q3UM45 361 aa13.77□□□□□ -0.21
Rnf4-201ENSMUST00000030992 Tmprss11aQ3UQ41 389 aa13.77□□□□□ -0.21
Rnf4-201ENSMUST00000030992 E2f8Q58FA4 860 aa13.77□□□□□ -0.21
Rnf4-201ENSMUST00000030992 Psen2Q61144 448 aa13.77□□□□□ -0.21
Rnf4-201ENSMUST00000030992 Git1Q68FF6 770 aa13.77□□□□□ -0.21
Rnf4-201ENSMUST00000030992 AopepQ8BXQ6 817 aa13.77□□□□□ -0.21
Rnf4-201ENSMUST00000030992 Ccdc134Q8C7V8 229 aa13.77□□□□□ -0.21
Rnf4-201ENSMUST00000030992 Epn2Q8CHU3 595 aa13.77□□□□□ -0.21
Rnf4-201ENSMUST00000030992 LgsnQ8CIX8 563 aa13.77□□□□□ -0.21
Rnf4-201ENSMUST00000030992 Lgi2Q8K4Z0 550 aa13.77□□□□□ -0.21
Rnf4-201ENSMUST00000030992 Rassf3Q99P51 232 aa13.77□□□□□ -0.21
Rnf4-201ENSMUST00000030992 Ctnnbl1Q9CWL8 563 aaKnown RBP13.77□□□□□ -0.21
Rnf4-201ENSMUST00000030992 Cfap53Q9D439 514 aa13.77□□□□□ -0.21
Rnf4-201ENSMUST00000030992 Cpb1B2RS76 415 aa13.76□□□□□ -0.21
Rnf4-201ENSMUST00000030992 Ppfia4B8QI36 1187 aa13.76□□□□□ -0.21
Rnf4-201ENSMUST00000030992 Ppp1r9aH3BJD6 1292 aa13.76□□□□□ -0.21
Rnf4-201ENSMUST00000030992 Gm10436L7N1Y3 520 aa13.76□□□□□ -0.21
Rnf4-201ENSMUST00000030992 Has3O08650 554 aa13.76□□□□□ -0.21
Rnf4-201ENSMUST00000030992 Per1O35973 1291 aa13.76□□□□□ -0.21
Rnf4-201ENSMUST00000030992 Ccnd2P30280 289 aa13.76□□□□□ -0.21
Rnf4-201ENSMUST00000030992 LxnP70202 222 aa13.76□□□□□ -0.21
Rnf4-201ENSMUST00000030992 Tfcp2l1Q3UNW5 479 aa13.76□□□□□ -0.21
Rnf4-201ENSMUST00000030992 Anks6Q6GQX6 883 aa13.76□□□□□ -0.21
Rnf4-201ENSMUST00000030992 Ano5Q75UR0 904 aa13.76□□□□□ -0.21
Rnf4-201ENSMUST00000030992 Spata16Q8C636 571 aa13.76□□□□□ -0.21
Rnf4-201ENSMUST00000030992 Mrgprx1Q8CIP3 322 aa13.76□□□□□ -0.21
Rnf4-201ENSMUST00000030992 Stard7Q8R1R3 373 aa13.76□□□□□ -0.21
Rnf4-201ENSMUST00000030992 Cfap57Q9D180 1249 aa13.76□□□□□ -0.21
Rnf4-201ENSMUST00000030992 IscuQ9D7P6 168 aa13.76□□□□□ -0.21
Rnf4-201ENSMUST00000030992 Skint3A7TZF0 458 aa13.76□□□□□ -0.21
Rnf4-201ENSMUST00000030992 Zfpm1O35615 995 aa13.76□□□□□ -0.21
Rnf4-201ENSMUST00000030992 Cap1P40124 474 aa13.76□□□□□ -0.21
Rnf4-201ENSMUST00000030992 R3hdm4Q4VBF2 262 aa13.76□□□□□ -0.21
Rnf4-201ENSMUST00000030992 Tas2r134Q7TQB0 298 aa13.76□□□□□ -0.21
Rnf4-201ENSMUST00000030992 Atg4cQ811C2 458 aa13.76□□□□□ -0.21
Rnf4-201ENSMUST00000030992 Mettl13Q91YR5 698 aa13.76□□□□□ -0.21
Rnf4-201ENSMUST00000030992 Med15Q924H2 789 aa13.76□□□□□ -0.21
Rnf4-201ENSMUST00000030992 Ttll6A4Q9E8 822 aa13.75□□□□□ -0.21
Rnf4-201ENSMUST00000030992 Atp2c2A7L9Z8 944 aa13.75□□□□□ -0.21
Rnf4-201ENSMUST00000030992 ChkbO55229 394 aa13.75□□□□□ -0.21
Rnf4-201ENSMUST00000030992 CraddO88843 199 aa13.75□□□□□ -0.21
Rnf4-201ENSMUST00000030992 Pik3r1P26450 724 aa13.75□□□□□ -0.21
Rnf4-201ENSMUST00000030992 AdssP46664 456 aa13.75□□□□□ -0.21
Rnf4-201ENSMUST00000030992 Opa1P58281 960 aa13.75□□□□□ -0.21
Rnf4-201ENSMUST00000030992 Tgoln2Q62314 363 aa13.75□□□□□ -0.21
Rnf4-201ENSMUST00000030992 Nr2e1Q64104 385 aa13.75□□□□□ -0.21
Rnf4-201ENSMUST00000030992 Nucks1Q80XU3 234 aaKnown RBP13.75□□□□□ -0.21
Rnf4-201ENSMUST00000030992 Znf618Q80YY7 953 aaKnown RBP13.75□□□□□ -0.21
Rnf4-201ENSMUST00000030992 Tmem117Q8BH18 514 aa13.75□□□□□ -0.21
Rnf4-201ENSMUST00000030992 Rufy1Q8BIJ7 712 aa13.75□□□□□ -0.21
Rnf4-201ENSMUST00000030992 Olfml3Q8BK62 406 aa13.75□□□□□ -0.21
Rnf4-201ENSMUST00000030992 EtnpplQ8BWU8 499 aa13.75□□□□□ -0.21
Rnf4-201ENSMUST00000030992 DaglbQ91WC9 669 aa13.75□□□□□ -0.21
Rnf4-201ENSMUST00000030992 Ttc1Q91Z38 292 aa13.75□□□□□ -0.21
Rnf4-201ENSMUST00000030992 Ccdc83Q9D4V3 305 aa13.75□□□□□ -0.21
Rnf4-201ENSMUST00000030992 CsadQ9DBE0 493 aa13.75□□□□□ -0.21
Rnf4-201ENSMUST00000030992 PycardQ9EPB4 193 aa13.75□□□□□ -0.21
Rnf4-201ENSMUST00000030992 Fmnl1Q9JL26 1094 aa13.75□□□□□ -0.21
Rnf4-201ENSMUST00000030992 Rnf103Q9R1W3 683 aa13.75□□□□□ -0.21
Rnf4-201ENSMUST00000030992 Pgap3A2A559 320 aa13.75□□□□□ -0.21
Rnf4-201ENSMUST00000030992 1700018F24RikB2RW27 314 aa13.75□□□□□ -0.21
Retrieved 100 of 22,080 RNA–protein pairs in 31.5 ms