RNA–Protein interactions for RNA: ENST00000642100.1

CASC19-279, Transcript of cancer susceptibility 19, humanhuman

Gene CASC19, Length 656 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC19-279ENST00000642100 TRIM26Q12899 539 aaPredicted RBP13.13□□□□□ -0.31
CASC19-279ENST00000642100 PPP1R15BQ5SWA1 713 aa13.12□□□□□ -0.31
CASC19-279ENST00000642100 KDM4FA0A1W2PPD8 638 aa13.09□□□□□ -0.31
CASC19-279ENST00000642100 ZNF687Q8N1G0 1237 aa13.09□□□□□ -0.31
CASC19-279ENST00000642100 DDRGK1Q96HY6 314 aa13.09□□□□□ -0.31
CASC19-279ENST00000642100 ARID3AQ99856 593 aa13.09□□□□□ -0.31
CASC19-279ENST00000642100 FAM117AQ9C073 453 aa13.08□□□□□ -0.32
CASC19-279ENST00000642100 FLIIQ13045 1269 aa13.07□□□□□ -0.32
CASC19-279ENST00000642100 LHX6Q9UPM6 363 aa13.07□□□□□ -0.32
CASC19-279ENST00000642100 MINK1Q8N4C8 1332 aaPredicted RBP13.07□□□□□ -0.32
CASC19-279ENST00000642100 SPNS2Q8IVW8 549 aa13.06□□□□□ -0.32
CASC19-279ENST00000642100 DPYSL4O14531 572 aa13.05□□□□□ -0.32
CASC19-279ENST00000642100 PDIA6Q15084 440 aa13.05□□□□□ -0.32
CASC19-279ENST00000642100 OXER1Q8TDS5 423 aa13.05□□□□□ -0.32
CASC19-279ENST00000642100 TBC1D12O60347 775 aa13.03□□□□□ -0.32
CASC19-279ENST00000642100 C1orf115Q9H7X2 142 aa13.01□□□□□ -0.33
CASC19-279ENST00000642100 GPR37O15354 613 aa13□□□□□ -0.33
CASC19-279ENST00000642100 HRCP23327 699 aa13□□□□□ -0.33
CASC19-279ENST00000642100 UPF1Q92900 1129 aaKnown RBP eCLIP13□□□□□ -0.33
CASC19-279ENST00000642100 EMILIN3Q9NT22 766 aa13□□□□□ -0.33
CASC19-279ENST00000642100 PLEKHG3A1L390 1219 aa12.99□□□□□ -0.33
CASC19-279ENST00000642100 APBB1O00213 710 aa12.99□□□□□ -0.33
CASC19-279ENST00000642100 MAP2K5Q13163 448 aa12.99□□□□□ -0.33
CASC19-279ENST00000642100 AMHR2Q16671 573 aa12.97□□□□□ -0.33
CASC19-279ENST00000642100 MMRN1Q13201 1228 aa12.96□□□□□ -0.33
CASC19-279ENST00000642100 CCDC102AQ96A19 550 aa12.96□□□□□ -0.33
CASC19-279ENST00000642100 GOPCQ9HD26 462 aa12.96□□□□□ -0.33
CASC19-279ENST00000642100 IRF6O14896 467 aa12.95□□□□□ -0.34
CASC19-279ENST00000642100 PSDA5PKW4 1024 aaPredicted RBP12.94□□□□□ -0.34
CASC19-279ENST00000642100 ARID3CA6NKF2 412 aa12.94□□□□□ -0.34
CASC19-279ENST00000642100 POTEEQ6S8J3 1075 aa12.94□□□□□ -0.34
CASC19-279ENST00000642100 NUTM2FA1L443 756 aa12.93□□□□□ -0.34
CASC19-279ENST00000642100 NPM2Q86SE8 214 aaKnown RBP12.92□□□□□ -0.34
CASC19-279ENST00000642100 PARP9Q8IXQ6 854 aa12.92□□□□□ -0.34
CASC19-279ENST00000642100 PDIA4P13667 645 aaKnown RBP12.9□□□□□ -0.34
CASC19-279ENST00000642100 GNPATO15228 680 aa12.89□□□□□ -0.35
CASC19-279ENST00000642100 PBX2P40425 430 aa12.89□□□□□ -0.35
CASC19-279ENST00000642100 ANO8Q9HCE9 1232 aaPredicted RBP12.89□□□□□ -0.35
CASC19-279ENST00000642100 GRXCR2A6NFK2 248 aa12.88□□□□□ -0.35
CASC19-279ENST00000642100 A6NJR5 290 aa12.88□□□□□ -0.35
CASC19-279ENST00000642100 AXIN2Q9Y2T1 843 aa12.88□□□□□ -0.35
CASC19-279ENST00000642100 EVI5O60447 810 aa12.87□□□□□ -0.35
CASC19-279ENST00000642100 MAP3K9P80192 1104 aa12.87□□□□□ -0.35
CASC19-279ENST00000642100 ZBTB7CA1YPR0 619 aa12.86□□□□□ -0.35
CASC19-279ENST00000642100 LSM11P83369 360 aaKnown RBP eCLIP12.86□□□□□ -0.35
CASC19-279ENST00000642100 HIC1Q14526 733 aa12.86□□□□□ -0.35
CASC19-279ENST00000642100 ONECUT3O60422 494 aaPredicted RBP12.85□□□□□ -0.35
CASC19-279ENST00000642100 PPP4R3BQ5MIZ7 849 aa12.85□□□□□ -0.35
CASC19-279ENST00000642100 ANKRD13DQ6ZTN6 518 aa12.85□□□□□ -0.35
CASC19-279ENST00000642100 ARHGAP33O14559 1287 aa12.84□□□□□ -0.35
CASC19-279ENST00000642100 FCHSD2O94868 740 aa12.84□□□□□ -0.35
CASC19-279ENST00000642100 TTLL12Q14166 644 aaPredicted RBP12.84□□□□□ -0.35
CASC19-279ENST00000642100 PCMTD1Q96MG8 357 aaPredicted RBP12.84□□□□□ -0.35
CASC19-279ENST00000642100 TRAK2O60296 914 aa12.83□□□□□ -0.36
CASC19-279ENST00000642100 FOSBP53539 338 aa12.81□□□□□ -0.36
CASC19-279ENST00000642100 ZNF454Q8N9F8 522 aa12.8□□□□□ -0.36
CASC19-279ENST00000642100 OSBPP22059 807 aa12.79□□□□□ -0.36
CASC19-279ENST00000642100 CCDC82Q8N4S0 544 aa12.79□□□□□ -0.36
CASC19-279ENST00000642100 PSEN2P49810 448 aa12.78□□□□□ -0.36
CASC19-279ENST00000642100 DMRTA1Q5VZB9 504 aa12.77□□□□□ -0.37
CASC19-279ENST00000642100 CLUAP1Q96AJ1 413 aa12.77□□□□□ -0.37
CASC19-279ENST00000642100 JPH4Q96JJ6 628 aa12.77□□□□□ -0.37
CASC19-279ENST00000642100 CCDC9Q9Y3X0 531 aaKnown RBP12.77□□□□□ -0.37
CASC19-279ENST00000642100 FECHP22830 423 aa12.75□□□□□ -0.37
CASC19-279ENST00000642100 PTGER2P43116 358 aa12.75□□□□□ -0.37
CASC19-279ENST00000642100 GIGYF2Q6Y7W6 1299 aaKnown RBP12.75□□□□□ -0.37
CASC19-279ENST00000642100 BCL2L12Q9HB09 334 aa12.74□□□□□ -0.37
CASC19-279ENST00000642100 MYT1LQ9UL68 1186 aa12.74□□□□□ -0.37
CASC19-279ENST00000642100 KCNK17Q96T54 332 aa12.73□□□□□ -0.37
CASC19-279ENST00000642100 MS4A1P11836 297 aa12.72□□□□□ -0.37
CASC19-279ENST00000642100 ADGRD1Q6QNK2 874 aa12.72□□□□□ -0.37
CASC19-279ENST00000642100 TK2O00142 265 aa12.71□□□□□ -0.37
CASC19-279ENST00000642100 SH3D19Q5HYK7 790 aa12.71□□□□□ -0.37
CASC19-279ENST00000642100 ZDHHC16Q969W1 377 aa12.71□□□□□ -0.37
CASC19-279ENST00000642100 RNF166Q96A37 237 aaPredicted RBP12.71□□□□□ -0.37
CASC19-279ENST00000642100 PCDHGA10Q9Y5H3 936 aa12.71□□□□□ -0.37
CASC19-279ENST00000642100 MCM6Q14566 821 aa12.7□□□□□ -0.38
CASC19-279ENST00000642100 ADAM33Q9BZ11 813 aa12.7□□□□□ -0.38
CASC19-279ENST00000642100 PTGDRQ13258 359 aa12.68□□□□□ -0.38
CASC19-279ENST00000642100 DDX12PQ92771 950 aa12.68□□□□□ -0.38
CASC19-279ENST00000642100 PHF14O94880 888 aa12.67□□□□□ -0.38
CASC19-279ENST00000642100 PTPREP23469 700 aa12.67□□□□□ -0.38
CASC19-279ENST00000642100 KCNH8Q96L42 1107 aa12.67□□□□□ -0.38
CASC19-279ENST00000642100 HRO43593 1189 aa12.66□□□□□ -0.38
CASC19-279ENST00000642100 PROSER2Q86WR7 435 aaPredicted RBP12.66□□□□□ -0.38
CASC19-279ENST00000642100 CLCN1P35523 988 aa12.65□□□□□ -0.38
CASC19-279ENST00000642100 SERPINA10Q9UK55 444 aa12.65□□□□□ -0.38
CASC19-279ENST00000642100 RAD21O60216 631 aa12.64□□□□□ -0.39
CASC19-279ENST00000642100 SKIV2LQ15477 1246 aaKnown RBP12.64□□□□□ -0.39
CASC19-279ENST00000642100 TYW1BQ6NUM6 668 aa12.64□□□□□ -0.39
CASC19-279ENST00000642100 NECTIN2Q92692 538 aa12.64□□□□□ -0.39
CASC19-279ENST00000642100 FBXW7Q969H0 707 aa12.63□□□□□ -0.39
CASC19-279ENST00000642100 REPIN1Q9BWE0 567 aaKnown RBP12.63□□□□□ -0.39
CASC19-279ENST00000642100 SLC4A5Q9BY07 1137 aa12.63□□□□□ -0.39
CASC19-279ENST00000642100 ZNF777Q9ULD5 760 aaPredicted RBP12.63□□□□□ -0.39
CASC19-279ENST00000642100 VPS9D1Q9Y2B5 631 aa12.63□□□□□ -0.39
CASC19-279ENST00000642100 CCDC97Q96F63 343 aaPredicted RBP12.62□□□□□ -0.39
CASC19-279ENST00000642100 TMUB1Q9BVT8 246 aa12.61□□□□□ -0.39
CASC19-279ENST00000642100 EPAS1Q99814 870 aa12.6□□□□□ -0.39
CASC19-279ENST00000642100 ZBED2Q9BTP6 218 aa12.6□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms