RNA–Protein interactions for RNA: ENST00000642004.1

SAMMSON-225, survival associated mitochondrial melanoma specific oncogenic non-coding RNA, humanhuman

Gene SAMMSON, Length 1,199 nt, Biotype lincRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SAMMSON-225ENST00000642004 ZNF710Q8N1W2 664 aa8.12□□□□□ -1.11
SAMMSON-225ENST00000642004 MINK1Q8N4C8 1332 aaPredicted RBP8.11□□□□□ -1.11
SAMMSON-225ENST00000642004 PLEKHG3A1L390 1219 aa8.1□□□□□ -1.11
SAMMSON-225ENST00000642004 ZNF316A6NFI3 1004 aaPredicted RBP8.1□□□□□ -1.11
SAMMSON-225ENST00000642004 OXER1Q8TDS5 423 aa8.1□□□□□ -1.11
SAMMSON-225ENST00000642004 C1orf115Q9H7X2 142 aa8.1□□□□□ -1.11
SAMMSON-225ENST00000642004 DDRGK1Q96HY6 314 aa8.09□□□□□ -1.11
SAMMSON-225ENST00000642004 PCDHGA4Q9Y5G9 962 aa8.09□□□□□ -1.11
SAMMSON-225ENST00000642004 MAP2K5Q13163 448 aa8.08□□□□□ -1.12
SAMMSON-225ENST00000642004 AMHR2Q16671 573 aa8.08□□□□□ -1.12
SAMMSON-225ENST00000642004 IRF6O14896 467 aa8.07□□□□□ -1.12
SAMMSON-225ENST00000642004 TRIM26Q12899 539 aaPredicted RBP8.07□□□□□ -1.12
SAMMSON-225ENST00000642004 CCDC102AQ96A19 550 aa8.07□□□□□ -1.12
SAMMSON-225ENST00000642004 FLIIQ13045 1269 aa8.06□□□□□ -1.12
SAMMSON-225ENST00000642004 ARSIQ5FYB1 569 aa8.06□□□□□ -1.12
SAMMSON-225ENST00000642004 TBC1D12O60347 775 aa8.05□□□□□ -1.12
SAMMSON-225ENST00000642004 PARP9Q8IXQ6 854 aa8.05□□□□□ -1.12
SAMMSON-225ENST00000642004 ANO8Q9HCE9 1232 aaPredicted RBP8.04□□□□□ -1.12
SAMMSON-225ENST00000642004 GOPCQ9HD26 462 aa8.04□□□□□ -1.12
SAMMSON-225ENST00000642004 GNPATO15228 680 aa8.03□□□□□ -1.12
SAMMSON-225ENST00000642004 ONECUT3O60422 494 aaPredicted RBP8.03□□□□□ -1.12
SAMMSON-225ENST00000642004 HRCP23327 699 aa8.03□□□□□ -1.12
SAMMSON-225ENST00000642004 RNF166Q96A37 237 aaPredicted RBP8.03□□□□□ -1.12
SAMMSON-225ENST00000642004 NUTM2FA1L443 756 aa8.02□□□□□ -1.13
SAMMSON-225ENST00000642004 ARID3AQ99856 593 aa8.02□□□□□ -1.13
SAMMSON-225ENST00000642004 GRXCR2A6NFK2 248 aa8.01□□□□□ -1.13
SAMMSON-225ENST00000642004 OSBPP22059 807 aa8.01□□□□□ -1.13
SAMMSON-225ENST00000642004 HIC1Q14526 733 aa8.01□□□□□ -1.13
SAMMSON-225ENST00000642004 PSDA5PKW4 1024 aaPredicted RBP8□□□□□ -1.13
SAMMSON-225ENST00000642004 ARID3CA6NKF2 412 aa8□□□□□ -1.13
SAMMSON-225ENST00000642004 APBB1O00213 710 aa8□□□□□ -1.13
SAMMSON-225ENST00000642004 KHSRPQ92945 711 aaKnown RBP eCLIP8□□□□□ -1.13
SAMMSON-225ENST00000642004 FCHSD2O94868 740 aa7.99□□□□□ -1.13
SAMMSON-225ENST00000642004 NUDT7P0C024 238 aa7.99□□□□□ -1.13
SAMMSON-225ENST00000642004 A6NJR5 290 aa7.98□□□□□ -1.13
SAMMSON-225ENST00000642004 FECHP22830 423 aa7.98□□□□□ -1.13
SAMMSON-225ENST00000642004 PTGER2P43116 358 aa7.98□□□□□ -1.13
SAMMSON-225ENST00000642004 MAP3K9P80192 1104 aa7.98□□□□□ -1.13
SAMMSON-225ENST00000642004 ZNF687Q8N1G0 1237 aa7.98□□□□□ -1.13
SAMMSON-225ENST00000642004 ERBB3P21860 1342 aa7.98□□□□□ -1.13
SAMMSON-225ENST00000642004 LHX6Q9UPM6 363 aa7.97□□□□□ -1.13
SAMMSON-225ENST00000642004 MYT1LQ9UL68 1186 aa7.96□□□□□ -1.14
SAMMSON-225ENST00000642004 EVI5O60447 810 aa7.95□□□□□ -1.14
SAMMSON-225ENST00000642004 RANGAP1P46060 587 aaPredicted RBP7.95□□□□□ -1.14
SAMMSON-225ENST00000642004 VARS2Q5ST30 1063 aaKnown RBP7.95□□□□□ -1.14
SAMMSON-225ENST00000642004 TRAK2O60296 914 aa7.94□□□□□ -1.14
SAMMSON-225ENST00000642004 MS4A1P11836 297 aa7.94□□□□□ -1.14
SAMMSON-225ENST00000642004 TTLL12Q14166 644 aaPredicted RBP7.94□□□□□ -1.14
SAMMSON-225ENST00000642004 UPF1Q92900 1129 aaKnown RBP eCLIP7.94□□□□□ -1.14
SAMMSON-225ENST00000642004 PBX2P40425 430 aa7.93□□□□□ -1.14
SAMMSON-225ENST00000642004 GIGYF2Q6Y7W6 1299 aaKnown RBP7.93□□□□□ -1.14
SAMMSON-225ENST00000642004 PCMTD1Q96MG8 357 aaPredicted RBP7.93□□□□□ -1.14
SAMMSON-225ENST00000642004 PRIM1P49642 420 aaKnown RBP7.92□□□□□ -1.14
SAMMSON-225ENST00000642004 FOSBP53539 338 aa7.92□□□□□ -1.14
SAMMSON-225ENST00000642004 PTGDRQ13258 359 aa7.92□□□□□ -1.14
SAMMSON-225ENST00000642004 DDX12PQ92771 950 aa7.91□□□□□ -1.14
SAMMSON-225ENST00000642004 CLUAP1Q96AJ1 413 aa7.91□□□□□ -1.14
SAMMSON-225ENST00000642004 JPH4Q96JJ6 628 aa7.91□□□□□ -1.14
SAMMSON-225ENST00000642004 REPIN1Q9BWE0 567 aaKnown RBP7.91□□□□□ -1.14
SAMMSON-225ENST00000642004 SH3D19Q5HYK7 790 aa7.9□□□□□ -1.14
SAMMSON-225ENST00000642004 TMUB1Q9BVT8 246 aa7.9□□□□□ -1.14
SAMMSON-225ENST00000642004 MCM6Q14566 821 aa7.89□□□□□ -1.15
SAMMSON-225ENST00000642004 PPP4R3BQ5MIZ7 849 aa7.89□□□□□ -1.15
SAMMSON-225ENST00000642004 CCDC82Q8N4S0 544 aa7.89□□□□□ -1.15
SAMMSON-225ENST00000642004 PHF14O94880 888 aa7.88□□□□□ -1.15
SAMMSON-225ENST00000642004 PDIA4P13667 645 aaKnown RBP7.88□□□□□ -1.15
SAMMSON-225ENST00000642004 POTEEQ6S8J3 1075 aa7.88□□□□□ -1.15
SAMMSON-225ENST00000642004 BCL2L12Q9HB09 334 aa7.87□□□□□ -1.15
SAMMSON-225ENST00000642004 NPM2Q86SE8 214 aaKnown RBP7.86□□□□□ -1.15
SAMMSON-225ENST00000642004 EPAS1Q99814 870 aa7.86□□□□□ -1.15
SAMMSON-225ENST00000642004 ARHGAP33O14559 1287 aa7.85□□□□□ -1.15
SAMMSON-225ENST00000642004 CLCN1P35523 988 aa7.85□□□□□ -1.15
SAMMSON-225ENST00000642004 SKIV2LQ15477 1246 aaKnown RBP7.85□□□□□ -1.15
SAMMSON-225ENST00000642004 FBXW7Q969H0 707 aa7.85□□□□□ -1.15
SAMMSON-225ENST00000642004 PCDHGA10Q9Y5H3 936 aa7.85□□□□□ -1.15
SAMMSON-225ENST00000642004 FNBP4Q8N3X1 1017 aaPredicted RBP7.84□□□□□ -1.15
SAMMSON-225ENST00000642004 ZNF454Q8N9F8 522 aa7.84□□□□□ -1.15
SAMMSON-225ENST00000642004 ZDHHC16Q969W1 377 aa7.84□□□□□ -1.15
SAMMSON-225ENST00000642004 SLC4A5Q9BY07 1137 aa7.84□□□□□ -1.15
SAMMSON-225ENST00000642004 ZBTB7CA1YPR0 619 aa7.83□□□□□ -1.16
SAMMSON-225ENST00000642004 TYW1BQ6NUM6 668 aa7.83□□□□□ -1.16
SAMMSON-225ENST00000642004 PROSER2Q86WR7 435 aaPredicted RBP7.83□□□□□ -1.16
SAMMSON-225ENST00000642004 NECTIN2Q92692 538 aa7.83□□□□□ -1.16
SAMMSON-225ENST00000642004 GPCPD1Q9NPB8 672 aa7.83□□□□□ -1.16
SAMMSON-225ENST00000642004 NPDC1Q9NQX5 325 aaPredicted RBP7.83□□□□□ -1.16
SAMMSON-225ENST00000642004 TK2O00142 265 aa7.82□□□□□ -1.16
SAMMSON-225ENST00000642004 LSM11P83369 360 aaKnown RBP eCLIP7.82□□□□□ -1.16
SAMMSON-225ENST00000642004 SSTR3P32745 418 aaPredicted RBP7.81□□□□□ -1.16
SAMMSON-225ENST00000642004 PHOX2BQ99453 314 aa7.81□□□□□ -1.16
SAMMSON-225ENST00000642004 MDM2Q00987 491 aaPredicted RBP7.8□□□□□ -1.16
SAMMSON-225ENST00000642004 EN1Q05925 392 aaPredicted RBP7.8□□□□□ -1.16
SAMMSON-225ENST00000642004 ADAM33Q9BZ11 813 aa7.8□□□□□ -1.16
SAMMSON-225ENST00000642004 CDHR5Q9HBB8 845 aa7.8□□□□□ -1.16
SAMMSON-225ENST00000642004 ZNF777Q9ULD5 760 aaPredicted RBP7.8□□□□□ -1.16
SAMMSON-225ENST00000642004 PROCA1Q8NCQ7 364 aaPredicted RBP7.79□□□□□ -1.16
SAMMSON-225ENST00000642004 POM121Q96HA1 1249 aa7.79□□□□□ -1.16
SAMMSON-225ENST00000642004 CCDC9Q9Y3X0 531 aaKnown RBP7.79□□□□□ -1.16
SAMMSON-225ENST00000642004 PTPREP23469 700 aa7.78□□□□□ -1.16
SAMMSON-225ENST00000642004 ANKRD13DQ6ZTN6 518 aa7.78□□□□□ -1.16
SAMMSON-225ENST00000642004 BEGAINQ9BUH8 593 aa7.78□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms