RNA–Protein interactions for RNA: ENST00000641923.1

SAMMSON-223, survival associated mitochondrial melanoma specific oncogenic non-coding RNA, human

Gene SAMMSON, Length 1,213 nt, Biotype lincRNA.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SAMMSON-223	ENST00000641923	DIP2C	Q9Y2E4	1556 aa		13.43	□□□□□ -0.26
SAMMSON-223	ENST00000641923	ABCA6	Q8N139	1617 aa		13.42	□□□□□ -0.26
SAMMSON-223	ENST00000641923	CHIC2	Q9UKJ5	165 aa		13.42	□□□□□ -0.26
SAMMSON-223	ENST00000641923	DHX29	Q7Z478	1369 aa	Known RBP	13.42	□□□□□ -0.26
SAMMSON-223	ENST00000641923	A2M	P01023	1474 aa		13.42	□□□□□ -0.26
SAMMSON-223	ENST00000641923	BCORL1	Q5H9F3	1711 aa		13.42	□□□□□ -0.26
SAMMSON-223	ENST00000641923	HRC	P23327	699 aa		13.41	□□□□□ -0.26
SAMMSON-223	ENST00000641923	NAIP	Q13075	1403 aa		13.4	□□□□□ -0.26
SAMMSON-223	ENST00000641923	ANKRD50	Q9ULJ7	1429 aa		13.4	□□□□□ -0.26
SAMMSON-223	ENST00000641923	AGL	P35573	1532 aa		13.4	□□□□□ -0.26
SAMMSON-223	ENST00000641923	FAM135A	Q9P2D6	1515 aa		13.39	□□□□□ -0.27
SAMMSON-223	ENST00000641923	SETD5	Q9C0A6	1442 aa		13.39	□□□□□ -0.27
SAMMSON-223	ENST00000641923	YEATS2	Q9ULM3	1422 aa		13.39	□□□□□ -0.27
SAMMSON-223	ENST00000641923	RRP7BP	Q9NSQ0	103 aa		13.38	□□□□□ -0.27
SAMMSON-223	ENST00000641923	RNF216	Q9NWF9	866 aa	Predicted RBP	13.38	□□□□□ -0.27
SAMMSON-223	ENST00000641923	PCGF6	Q9BYE7	350 aa		13.35	□□□□□ -0.27
SAMMSON-223	ENST00000641923	RNF17	Q9BXT8	1623 aa	Known RBP	13.35	□□□□□ -0.27
SAMMSON-223	ENST00000641923	NCBP3	Q53F19	620 aa	Known RBP	13.34	□□□□□ -0.27
SAMMSON-223	ENST00000641923	KANK1	Q14678	1352 aa		13.33	□□□□□ -0.27
SAMMSON-223	ENST00000641923	DEPDC5	O75140	1603 aa		13.33	□□□□□ -0.28
SAMMSON-223	ENST00000641923	UNC13B	O14795	1591 aa		13.32	□□□□□ -0.28
SAMMSON-223	ENST00000641923	RAB3GAP2	Q9H2M9	1393 aa		13.32	□□□□□ -0.28
SAMMSON-223	ENST00000641923	ZC3H13	Q5T200	1668 aa	Known RBP	13.31	□□□□□ -0.28
SAMMSON-223	ENST00000641923	PRDM15	P57071	1507 aa	Predicted RBP	13.31	□□□□□ -0.28
SAMMSON-223	ENST00000641923	KDM5D	Q9BY66	1539 aa		13.3	□□□□□ -0.28
SAMMSON-223	ENST00000641923	KIF3B	O15066	747 aa		13.3	□□□□□ -0.28
SAMMSON-223	ENST00000641923	ARID4B	Q4LE39	1312 aa	Predicted RBP	13.29	□□□□□ -0.28
SAMMSON-223	ENST00000641923	KCNA4	P22459	653 aa		13.28	□□□□□ -0.28
SAMMSON-223	ENST00000641923	CNTLN	Q9NXG0	1405 aa		13.28	□□□□□ -0.28
SAMMSON-223	ENST00000641923	IQGAP3	Q86VI3	1631 aa		13.28	□□□□□ -0.28
SAMMSON-223	ENST00000641923	ESF1	Q9H501	851 aa	Known RBP	13.27	□□□□□ -0.29
SAMMSON-223	ENST00000641923	LMTK2	Q8IWU2	1503 aa		13.26	□□□□□ -0.29
SAMMSON-223	ENST00000641923	VWDE	Q8N2E2	1590 aa		13.26	□□□□□ -0.29
SAMMSON-223	ENST00000641923	NUP155	O75694	1391 aa		13.25	□□□□□ -0.29
SAMMSON-223	ENST00000641923	CACNB1	Q02641	598 aa	Predicted RBP	13.25	□□□□□ -0.29
SAMMSON-223	ENST00000641923	MROH1	Q8NDA8	1641 aa		13.24	□□□□□ -0.29
SAMMSON-223	ENST00000641923	MYT1	Q01538	1121 aa		13.24	□□□□□ -0.29
SAMMSON-223	ENST00000641923	GGT6	Q6P531	493 aa		13.24	□□□□□ -0.29
SAMMSON-223	ENST00000641923	TRIM52	Q96A61	297 aa		13.24	□□□□□ -0.29
SAMMSON-223	ENST00000641923	MROH2A	A6NES4	1674 aa		13.24	□□□□□ -0.29
SAMMSON-223	ENST00000641923	TET3	O43151	1660 aa		13.24	□□□□□ -0.29
SAMMSON-223	ENST00000641923	WASHC2C	Q9Y4E1	1318 aa		13.23	□□□□□ -0.29
SAMMSON-223	ENST00000641923	RPRD2	Q5VT52	1461 aa	Known RBP	13.23	□□□□□ -0.29
SAMMSON-223	ENST00000641923	SIGLEC1	Q9BZZ2	1709 aa		13.22	□□□□□ -0.29
SAMMSON-223	ENST00000641923	FER1L4	A9Z1Z3	1794 aa		13.22	□□□□□ -0.29
SAMMSON-223	ENST00000641923	ABCC3	O15438	1527 aa		13.21	□□□□□ -0.29
SAMMSON-223	ENST00000641923	ARHGAP31	Q2M1Z3	1444 aa		13.21	□□□□□ -0.3
SAMMSON-223	ENST00000641923	GRWD1	Q9BQ67	446 aa	Known RBP eCLIP	13.2	□□□□□ -0.3
SAMMSON-223	ENST00000641923	SLC4A1AP	Q9BWU0	796 aa	Known RBP	13.2	□□□□□ -0.3
SAMMSON-223	ENST00000641923	ADAMTSL3	P82987	1691 aa		13.2	□□□□□ -0.3
SAMMSON-223	ENST00000641923	CEP152	O94986	1710 aa		13.19	□□□□□ -0.3
SAMMSON-223	ENST00000641923	EFCAB6	Q5THR3	1501 aa		13.19	□□□□□ -0.3
SAMMSON-223	ENST00000641923	CAMSAP1	Q5T5Y3	1602 aa		13.19	□□□□□ -0.3
SAMMSON-223	ENST00000641923	CLSPN	Q9HAW4	1339 aa		13.18	□□□□□ -0.3
SAMMSON-223	ENST00000641923	PZP	P20742	1482 aa		13.18	□□□□□ -0.3
SAMMSON-223	ENST00000641923	CLTC	Q00610	1675 aa	Known RBP	13.18	□□□□□ -0.3
SAMMSON-223	ENST00000641923	MLEC	Q14165	292 aa		13.17	□□□□□ -0.3
SAMMSON-223	ENST00000641923	MPHOSPH9	Q99550	1183 aa		13.17	□□□□□ -0.3
SAMMSON-223	ENST00000641923	MADD	Q8WXG6	1647 aa		13.15	□□□□□ -0.3
SAMMSON-223	ENST00000641923	SETD1B	Q9UPS6	1966 aa	Known RBP	13.14	□□□□□ -0.31
SAMMSON-223	ENST00000641923	NPM3	O75607	178 aa	Known RBP	13.14	□□□□□ -0.31
SAMMSON-223	ENST00000641923		E9PCH4	1651 aa		13.14	□□□□□ -0.31
SAMMSON-223	ENST00000641923	ZMYM3	Q14202	1370 aa		13.13	□□□□□ -0.31
SAMMSON-223	ENST00000641923	DHX57	Q6P158	1386 aa	Known RBP	13.13	□□□□□ -0.31
SAMMSON-223	ENST00000641923	PKD2	Q13563	968 aa		13.13	□□□□□ -0.31
SAMMSON-223	ENST00000641923	SPHKAP	Q2M3C7	1700 aa		13.13	□□□□□ -0.31
SAMMSON-223	ENST00000641923	RIMS1	Q86UR5	1692 aa	Known RBP	13.12	□□□□□ -0.31
SAMMSON-223	ENST00000641923	NPAT	Q14207	1427 aa		13.12	□□□□□ -0.31
SAMMSON-223	ENST00000641923	C3	P01024	1663 aa		13.11	□□□□□ -0.31
SAMMSON-223	ENST00000641923	PREX1	Q8TCU6	1659 aa		13.11	□□□□□ -0.31
SAMMSON-223	ENST00000641923	TRPM2	O94759	1503 aa		13.1	□□□□□ -0.31
SAMMSON-223	ENST00000641923	PTPRT	O14522	1441 aa		13.1	□□□□□ -0.31
SAMMSON-223	ENST00000641923	SPATA31D1	Q6ZQQ2	1576 aa		13.1	□□□□□ -0.31
SAMMSON-223	ENST00000641923	NOS1	P29475	1434 aa		13.09	□□□□□ -0.31
SAMMSON-223	ENST00000641923	SLC52A1	Q9NWF4	448 aa		13.09	□□□□□ -0.31
SAMMSON-223	ENST00000641923	ERVK-7	P63135	1459 aa		13.09	□□□□□ -0.31
SAMMSON-223	ENST00000641923	PTPRM	P28827	1452 aa		13.08	□□□□□ -0.32
SAMMSON-223	ENST00000641923	CFAP65	Q6ZU64	1925 aa	Known RBP	13.07	□□□□□ -0.32
SAMMSON-223	ENST00000641923	CCDC144A	A2RUR9	1427 aa		13.07	□□□□□ -0.32
SAMMSON-223	ENST00000641923	CCER1	Q8TC90	406 aa	Predicted RBP	13.07	□□□□□ -0.32
SAMMSON-223	ENST00000641923	NLRP1	Q9C000	1473 aa		13.07	□□□□□ -0.32
SAMMSON-223	ENST00000641923	NEURL4	Q96JN8	1562 aa		13.07	□□□□□ -0.32
SAMMSON-223	ENST00000641923	ANKRD30B	Q9BXX2	1392 aa		13.07	□□□□□ -0.32
SAMMSON-223	ENST00000641923	KDM5A	P29375	1690 aa	Known RBP	13.05	□□□□□ -0.32
SAMMSON-223	ENST00000641923	KIF1B	O60333	1816 aa		13.05	□□□□□ -0.32
SAMMSON-223	ENST00000641923	RNF39	Q9H2S5	420 aa		13.05	□□□□□ -0.32
SAMMSON-223	ENST00000641923	TNR	Q92752	1358 aa		13.05	□□□□□ -0.32
SAMMSON-223	ENST00000641923	PIK3C2B	O00750	1634 aa		13.04	□□□□□ -0.32
SAMMSON-223	ENST00000641923	TIMELESS	Q9UNS1	1208 aa		13.03	□□□□□ -0.32
SAMMSON-223	ENST00000641923	SYNM	O15061	1565 aa		13.03	□□□□□ -0.32
SAMMSON-223	ENST00000641923	KDM4F	A0A1W2PPD8	638 aa		13.01	□□□□□ -0.33
SAMMSON-223	ENST00000641923	STAC3	Q96MF2	364 aa		13.01	□□□□□ -0.33
SAMMSON-223	ENST00000641923	PLA2R1	Q13018	1463 aa		13.01	□□□□□ -0.33
SAMMSON-223	ENST00000641923	ZNF142	P52746	1687 aa	Predicted RBP	13	□□□□□ -0.33
SAMMSON-223	ENST00000641923	CLTCL1	P53675	1640 aa		13	□□□□□ -0.33
SAMMSON-223	ENST00000641923	MYO3A	Q8NEV4	1616 aa		12.99	□□□□□ -0.33
SAMMSON-223	ENST00000641923	UHRF1BP1	Q6BDS2	1440 aa		12.99	□□□□□ -0.33
SAMMSON-223	ENST00000641923	FBXO31	Q5XUX0	539 aa	Predicted RBP	12.99	□□□□□ -0.33
SAMMSON-223	ENST00000641923	ADGRB3	O60242	1522 aa		12.98	□□□□□ -0.33
SAMMSON-223	ENST00000641923	A2ML1	A8K2U0	1454 aa		12.98	□□□□□ -0.33

Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms