RNA–Protein interactions for RNA: ENST00000641715.1

SAMMSON-221, survival associated mitochondrial melanoma specific oncogenic non-coding RNA, humanhuman

BASIC

Gene SAMMSON, Length 1,546 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SAMMSON-221ENST00000641715 SHANK2Q9UPX8 1470 aa18.26■□□□□ 0.51
SAMMSON-221ENST00000641715 NPATQ14207 1427 aa18.25■□□□□ 0.51
SAMMSON-221ENST00000641715 PPARGC1BQ86YN6 1023 aaKnown RBP18.23■□□□□ 0.51
SAMMSON-221ENST00000641715 WASHC2CQ9Y4E1 1318 aa18.23■□□□□ 0.51
SAMMSON-221ENST00000641715 PTPRKQ15262 1439 aa18.23■□□□□ 0.51
SAMMSON-221ENST00000641715 KIF15Q9NS87 1388 aa18.23■□□□□ 0.51
SAMMSON-221ENST00000641715 MSH5O43196 834 aa18.23■□□□□ 0.51
SAMMSON-221ENST00000641715 FAM50AQ14320 339 aaKnown RBP18.23■□□□□ 0.51
SAMMSON-221ENST00000641715 RRP7BPQ9NSQ0 103 aa18.23■□□□□ 0.51
SAMMSON-221ENST00000641715 CHIC2Q9UKJ5 165 aa18.23■□□□□ 0.51
SAMMSON-221ENST00000641715 KDM5DQ9BY66 1539 aa18.22■□□□□ 0.51
SAMMSON-221ENST00000641715 DUOX2Q9NRD8 1548 aa18.22■□□□□ 0.51
SAMMSON-221ENST00000641715 RNF17Q9BXT8 1623 aaKnown RBP18.22■□□□□ 0.51
SAMMSON-221ENST00000641715 EIF2AK4Q9P2K8 1649 aaKnown RBP18.22■□□□□ 0.51
SAMMSON-221ENST00000641715 FAM135AQ9P2D6 1515 aa18.21■□□□□ 0.51
SAMMSON-221ENST00000641715 STRCQ7RTU9 1775 aa18.18■□□□□ 0.5
SAMMSON-221ENST00000641715 MROH1Q8NDA8 1641 aa18.18■□□□□ 0.5
SAMMSON-221ENST00000641715 FBXO31Q5XUX0 539 aaPredicted RBP18.18■□□□□ 0.5
SAMMSON-221ENST00000641715 ANKRD30AQ9BXX3 1397 aa18.17■□□□□ 0.5
SAMMSON-221ENST00000641715 NCOA1Q15788 1441 aa18.17■□□□□ 0.5
SAMMSON-221ENST00000641715 ERBINQ96RT1 1412 aa18.16■□□□□ 0.5
SAMMSON-221ENST00000641715 PZPP20742 1482 aa18.16■□□□□ 0.5
SAMMSON-221ENST00000641715 MYO3AQ8NEV4 1616 aa18.16■□□□□ 0.5
SAMMSON-221ENST00000641715 ABCC3O15438 1527 aa18.15■□□□□ 0.5
SAMMSON-221ENST00000641715 ADGRL2O95490 1459 aa18.13■□□□□ 0.49
SAMMSON-221ENST00000641715 ZNF142P52746 1687 aaPredicted RBP18.13■□□□□ 0.49
SAMMSON-221ENST00000641715 ZC3H13Q5T200 1668 aaKnown RBP18.13■□□□□ 0.49
SAMMSON-221ENST00000641715 CEP152O94986 1710 aa18.12■□□□□ 0.49
SAMMSON-221ENST00000641715 CEP170BQ9Y4F5 1589 aaPredicted RBP18.12■□□□□ 0.49
SAMMSON-221ENST00000641715 CAMSAP1Q5T5Y3 1602 aa18.11■□□□□ 0.49
SAMMSON-221ENST00000641715 PRDM15P57071 1507 aaPredicted RBP18.11■□□□□ 0.49
SAMMSON-221ENST00000641715 TNRQ92752 1358 aa18.11■□□□□ 0.49
SAMMSON-221ENST00000641715 DMRT2Q9Y5R5 561 aa18.1■□□□□ 0.49
SAMMSON-221ENST00000641715 DEPDC5O75140 1603 aa18.1■□□□□ 0.49
SAMMSON-221ENST00000641715 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.09■□□□□ 0.49
SAMMSON-221ENST00000641715 A2ML1A8K2U0 1454 aa18.08■□□□□ 0.49
SAMMSON-221ENST00000641715 CFAP65Q6ZU64 1925 aaKnown RBP18.07■□□□□ 0.48
SAMMSON-221ENST00000641715 ILDR1Q86SU0 546 aaPredicted RBP18.07■□□□□ 0.48
SAMMSON-221ENST00000641715 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP18.06■□□□□ 0.48
SAMMSON-221ENST00000641715 PTPRTO14522 1441 aa18.05■□□□□ 0.48
SAMMSON-221ENST00000641715 ANKRD50Q9ULJ7 1429 aa18.05■□□□□ 0.48
SAMMSON-221ENST00000641715 PLA2R1Q13018 1463 aa18.05■□□□□ 0.48
SAMMSON-221ENST00000641715 NCKAP5LQ9HCH0 1330 aa18.05■□□□□ 0.48
SAMMSON-221ENST00000641715 SPATA31D1Q6ZQQ2 1576 aa18.04■□□□□ 0.48
SAMMSON-221ENST00000641715 ITGAEP38570 1179 aa18.04■□□□□ 0.48
SAMMSON-221ENST00000641715 KANK1Q14678 1352 aa18.04■□□□□ 0.48
SAMMSON-221ENST00000641715 ERVK-7P63135 1459 aa18.04■□□□□ 0.48
SAMMSON-221ENST00000641715 NLRP1Q9C000 1473 aa18.03■□□□□ 0.48
SAMMSON-221ENST00000641715 VWDEQ8N2E2 1590 aa18.03■□□□□ 0.48
SAMMSON-221ENST00000641715 ARHGAP31Q2M1Z3 1444 aa18.03■□□□□ 0.48
SAMMSON-221ENST00000641715 ROCK1Q13464 1354 aa18.02■□□□□ 0.48
SAMMSON-221ENST00000641715 PKD2Q13563 968 aa18.01■□□□□ 0.47
SAMMSON-221ENST00000641715 LMTK2Q8IWU2 1503 aa18.01■□□□□ 0.47
SAMMSON-221ENST00000641715 RRBP1Q9P2E9 1410 aaKnown RBP18.01■□□□□ 0.47
SAMMSON-221ENST00000641715 UGGT1Q9NYU2 1555 aa18■□□□□ 0.47
SAMMSON-221ENST00000641715 THEMISQ8N1K5 641 aaPredicted RBP17.98■□□□□ 0.47
SAMMSON-221ENST00000641715 CERKQ8TCT0 537 aa17.98■□□□□ 0.47
SAMMSON-221ENST00000641715 FBXO41Q8TF61 875 aa17.96■□□□□ 0.47
SAMMSON-221ENST00000641715 EFCAB6Q5THR3 1501 aa17.95■□□□□ 0.46
SAMMSON-221ENST00000641715 UNC13BO14795 1591 aa17.94■□□□□ 0.46
SAMMSON-221ENST00000641715 POLR1AO95602 1720 aaPredicted RBP17.94■□□□□ 0.46
SAMMSON-221ENST00000641715 NEURL4Q96JN8 1562 aa17.93■□□□□ 0.46
SAMMSON-221ENST00000641715 UBR1Q8IWV7 1749 aa17.93■□□□□ 0.46
SAMMSON-221ENST00000641715 ANKLE2Q86XL3 938 aa17.93■□□□□ 0.46
SAMMSON-221ENST00000641715 LTBP4Q8N2S1 1624 aa17.92■□□□□ 0.46
SAMMSON-221ENST00000641715 TET3O43151 1660 aa17.9■□□□□ 0.46
SAMMSON-221ENST00000641715 SYNMO15061 1565 aa17.9■□□□□ 0.46
SAMMSON-221ENST00000641715 NOS1P29475 1434 aa17.9■□□□□ 0.46
SAMMSON-221ENST00000641715 ZNF335Q9H4Z2 1342 aaPredicted RBP17.9■□□□□ 0.46
SAMMSON-221ENST00000641715 IDI1Q13907 227 aa17.89■□□□□ 0.45
SAMMSON-221ENST00000641715 PIK3C2BO00750 1634 aa17.89■□□□□ 0.45
SAMMSON-221ENST00000641715 RPRD2Q5VT52 1461 aaKnown RBP17.89■□□□□ 0.45
SAMMSON-221ENST00000641715 GCC2Q8IWJ2 1684 aa17.88■□□□□ 0.45
SAMMSON-221ENST00000641715 IQGAP3Q86VI3 1631 aa17.88■□□□□ 0.45
SAMMSON-221ENST00000641715 MED14O60244 1454 aa17.87■□□□□ 0.45
SAMMSON-221ENST00000641715 NUP155O75694 1391 aa17.87■□□□□ 0.45
SAMMSON-221ENST00000641715 PIAS4Q8N2W9 510 aaPredicted RBP17.87■□□□□ 0.45
SAMMSON-221ENST00000641715 NPHP4O75161 1426 aaPredicted RBP17.86■□□□□ 0.45
SAMMSON-221ENST00000641715 E9PCH4 1651 aa17.85■□□□□ 0.45
SAMMSON-221ENST00000641715 NAIPQ13075 1403 aa17.85■□□□□ 0.45
SAMMSON-221ENST00000641715 SLIT1O75093 1534 aa17.85■□□□□ 0.45
SAMMSON-221ENST00000641715 ARHGAP23Q9P227 1491 aa17.84■□□□□ 0.45
SAMMSON-221ENST00000641715 LTKP29376 864 aa17.84■□□□□ 0.45
SAMMSON-221ENST00000641715 SLC52A1Q9NWF4 448 aa17.84■□□□□ 0.45
SAMMSON-221ENST00000641715 STAG3Q9UJ98 1225 aa17.84■□□□□ 0.45
SAMMSON-221ENST00000641715 KDM5AP29375 1690 aaKnown RBP17.83■□□□□ 0.45
SAMMSON-221ENST00000641715 IQGAP1P46940 1657 aa17.83■□□□□ 0.45
SAMMSON-221ENST00000641715 SCAF11Q99590 1463 aaKnown RBP17.82■□□□□ 0.44
SAMMSON-221ENST00000641715 TXNDC2Q86VQ3 553 aa17.82■□□□□ 0.44
SAMMSON-221ENST00000641715 TMEM2Q9UHN6 1383 aa17.82■□□□□ 0.44
SAMMSON-221ENST00000641715 HFM1A2PYH4 1435 aa17.8■□□□□ 0.44
SAMMSON-221ENST00000641715 EID1Q9Y6B2 187 aa17.79■□□□□ 0.44
SAMMSON-221ENST00000641715 ADGRB3O60242 1522 aa17.79■□□□□ 0.44
SAMMSON-221ENST00000641715 IQSEC2Q5JU85 1478 aa17.79■□□□□ 0.44
SAMMSON-221ENST00000641715 MYO5BQ9ULV0 1848 aa17.77■□□□□ 0.43
SAMMSON-221ENST00000641715 TMEM131LA2VDJ0 1609 aa17.75■□□□□ 0.43
SAMMSON-221ENST00000641715 CPS1P31327 1500 aa17.74■□□□□ 0.43
SAMMSON-221ENST00000641715 STRCP1A6NGW2 1772 aa17.73■□□□□ 0.43
SAMMSON-221ENST00000641715 TRIM52Q96A61 297 aa17.72■□□□□ 0.43
SAMMSON-221ENST00000641715 CHGAP10645 457 aaKnown RBP17.72■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms