RNA–Protein interactions for RNA: ENST00000641711.1

PHGDH-224, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 712 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-224ENST00000641711 PPP6R1Q9UPN7 881 aa15.3■□□□□ 0.04
PHGDH-224ENST00000641711 MROH2AA6NES4 1674 aa15.29■□□□□ 0.04
PHGDH-224ENST00000641711 ZC3H13Q5T200 1668 aaKnown RBP15.29■□□□□ 0.04
PHGDH-224ENST00000641711 CNTLNQ9NXG0 1405 aa15.29■□□□□ 0.04
PHGDH-224ENST00000641711 MADDQ8WXG6 1647 aa15.28■□□□□ 0.04
PHGDH-224ENST00000641711 PRDM15P57071 1507 aaPredicted RBP15.28■□□□□ 0.04
PHGDH-224ENST00000641711 KDM5DQ9BY66 1539 aa15.27■□□□□ 0.03
PHGDH-224ENST00000641711 HFM1A2PYH4 1435 aa15.26■□□□□ 0.03
PHGDH-224ENST00000641711 ANKRD50Q9ULJ7 1429 aa15.26■□□□□ 0.03
PHGDH-224ENST00000641711 MROH1Q8NDA8 1641 aa15.25■□□□□ 0.03
PHGDH-224ENST00000641711 RIMS1Q86UR5 1692 aaKnown RBP15.25■□□□□ 0.03
PHGDH-224ENST00000641711 UNC13BO14795 1591 aa15.24■□□□□ 0.03
PHGDH-224ENST00000641711 CHIC2Q9UKJ5 165 aa15.24■□□□□ 0.03
PHGDH-224ENST00000641711 RRP7BPQ9NSQ0 103 aa15.23■□□□□ 0.03
PHGDH-224ENST00000641711 ACIN1Q9UKV3 1341 aaKnown RBP15.22■□□□□ 0.03
PHGDH-224ENST00000641711 KIF3BO15066 747 aa15.22■□□□□ 0.03
PHGDH-224ENST00000641711 VWDEQ8N2E2 1590 aa15.22■□□□□ 0.03
PHGDH-224ENST00000641711 NAIPQ13075 1403 aa15.21■□□□□ 0.03
PHGDH-224ENST00000641711 KDM4FA0A1W2PPD8 638 aa15.2■□□□□ 0.02
PHGDH-224ENST00000641711 LMTK2Q8IWU2 1503 aa15.2■□□□□ 0.02
PHGDH-224ENST00000641711 PTPRMP28827 1452 aa15.2■□□□□ 0.02
PHGDH-224ENST00000641711 CLTCQ00610 1675 aaKnown RBP15.19■□□□□ 0.02
PHGDH-224ENST00000641711 ABCC3O15438 1527 aa15.19■□□□□ 0.02
PHGDH-224ENST00000641711 SETD1BQ9UPS6 1966 aaKnown RBP15.19■□□□□ 0.02
PHGDH-224ENST00000641711 ITGAEP38570 1179 aa15.19■□□□□ 0.02
PHGDH-224ENST00000641711 ESF1Q9H501 851 aaKnown RBP15.19■□□□□ 0.02
PHGDH-224ENST00000641711 KANK1Q14678 1352 aa15.19■□□□□ 0.02
PHGDH-224ENST00000641711 IQGAP3Q86VI3 1631 aa15.17■□□□□ 0.02
PHGDH-224ENST00000641711 C3P01024 1663 aa15.17■□□□□ 0.02
PHGDH-224ENST00000641711 CEP152O94986 1710 aa15.17■□□□□ 0.02
PHGDH-224ENST00000641711 MLECQ14165 292 aa15.16■□□□□ 0.02
PHGDH-224ENST00000641711 GGT6Q6P531 493 aa15.16■□□□□ 0.02
PHGDH-224ENST00000641711 CAMSAP1Q5T5Y3 1602 aa15.16■□□□□ 0.02
PHGDH-224ENST00000641711 TET3O43151 1660 aa15.16■□□□□ 0.02
PHGDH-224ENST00000641711 NPATQ14207 1427 aa15.15■□□□□ 0.02
PHGDH-224ENST00000641711 ARHGAP31Q2M1Z3 1444 aa15.15■□□□□ 0.02
PHGDH-224ENST00000641711 CLSPNQ9HAW4 1339 aa15.15■□□□□ 0.02
PHGDH-224ENST00000641711 PZPP20742 1482 aa15.14■□□□□ 0.01
PHGDH-224ENST00000641711 EFCAB6Q5THR3 1501 aa15.13■□□□□ 0.01
PHGDH-224ENST00000641711 RPRD2Q5VT52 1461 aaKnown RBP15.13■□□□□ 0.01
PHGDH-224ENST00000641711 WASHC2CQ9Y4E1 1318 aa15.13■□□□□ 0.01
PHGDH-224ENST00000641711 SETD5Q9C0A6 1442 aa15.11■□□□□ 0.01
PHGDH-224ENST00000641711 ZMYM3Q14202 1370 aa15.11■□□□□ 0.01
PHGDH-224ENST00000641711 PREX1Q8TCU6 1659 aa15.09■□□□□ 0.01
PHGDH-224ENST00000641711 SPATA31D1Q6ZQQ2 1576 aa15.09■□□□□ 0.01
PHGDH-224ENST00000641711 ZNF142P52746 1687 aaPredicted RBP15.07■□□□□ 0
PHGDH-224ENST00000641711 DHX57Q6P158 1386 aaKnown RBP15.07■□□□□ 0
PHGDH-224ENST00000641711 NUP155O75694 1391 aa15.06■□□□□ 0
PHGDH-224ENST00000641711 ERVK-7P63135 1459 aa15.06■□□□□ 0
PHGDH-224ENST00000641711 E9PCH4 1651 aa15.05■□□□□ -0
PHGDH-224ENST00000641711 MYO3AQ8NEV4 1616 aa15.04■□□□□ -0
PHGDH-224ENST00000641711 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.04■□□□□ -05e-16■■□□□ 13.6
PHGDH-224ENST00000641711 NLRP1Q9C000 1473 aa15.03■□□□□ -0
PHGDH-224ENST00000641711 UHRF1BP1Q6BDS2 1440 aa15.03■□□□□ -0
PHGDH-224ENST00000641711 RAB3GAP2Q9H2M9 1393 aa15.03■□□□□ -0
PHGDH-224ENST00000641711 KDM5AP29375 1690 aaKnown RBP15.02□□□□□ -0.01
PHGDH-224ENST00000641711 NOS1P29475 1434 aa15.01□□□□□ -0.01
PHGDH-224ENST00000641711 TNRQ92752 1358 aa15.01□□□□□ -0.01
PHGDH-224ENST00000641711 SPHKAPQ2M3C7 1700 aa15.01□□□□□ -0.01
PHGDH-224ENST00000641711 PLPPR3Q6T4P5 718 aa15.01□□□□□ -0.01
PHGDH-224ENST00000641711 CFAP65Q6ZU64 1925 aaKnown RBP15.01□□□□□ -0.01
PHGDH-224ENST00000641711 CEP170BQ9Y4F5 1589 aaPredicted RBP14.99□□□□□ -0.01
PHGDH-224ENST00000641711 A2ML1A8K2U0 1454 aa14.99□□□□□ -0.01
PHGDH-224ENST00000641711 LMTK3Q96Q04 1460 aa14.98□□□□□ -0.01
PHGDH-224ENST00000641711 CEBPAP49715 358 aaPredicted RBP14.98□□□□□ -0.01
PHGDH-224ENST00000641711 PIK3C2BO00750 1634 aa14.98□□□□□ -0.01
PHGDH-224ENST00000641711 SYNMO15061 1565 aa14.98□□□□□ -0.01
PHGDH-224ENST00000641711 PTPRTO14522 1441 aa14.97□□□□□ -0.01
PHGDH-224ENST00000641711 TRPM2O94759 1503 aa14.97□□□□□ -0.01
PHGDH-224ENST00000641711 TRIM52Q96A61 297 aa14.96□□□□□ -0.01
PHGDH-224ENST00000641711 SLC4A1APQ9BWU0 796 aaKnown RBP14.94□□□□□ -0.02
PHGDH-224ENST00000641711 SLC52A1Q9NWF4 448 aa14.94□□□□□ -0.02
PHGDH-224ENST00000641711 PLA2R1Q13018 1463 aa14.94□□□□□ -0.02
PHGDH-224ENST00000641711 FBXO31Q5XUX0 539 aaPredicted RBP14.93□□□□□ -0.02
PHGDH-224ENST00000641711 UGGT1Q9NYU2 1555 aa14.93□□□□□ -0.02
PHGDH-224ENST00000641711 ADGRB3O60242 1522 aa14.92□□□□□ -0.02
PHGDH-224ENST00000641711 UBR1Q8IWV7 1749 aa14.92□□□□□ -0.02
PHGDH-224ENST00000641711 PKD2Q13563 968 aa14.9□□□□□ -0.02
PHGDH-224ENST00000641711 MPHOSPH9Q99550 1183 aa14.9□□□□□ -0.02
PHGDH-224ENST00000641711 NEURL4Q96JN8 1562 aa14.9□□□□□ -0.02
PHGDH-224ENST00000641711 KIF1BO60333 1816 aa14.89□□□□□ -0.03
PHGDH-224ENST00000641711 ZNF316A6NFI3 1004 aaPredicted RBP14.89□□□□□ -0.03
PHGDH-224ENST00000641711 FOXD1Q16676 465 aa14.89□□□□□ -0.03
PHGDH-224ENST00000641711 POLR1AO95602 1720 aaPredicted RBP14.88□□□□□ -0.03
PHGDH-224ENST00000641711 CLTCL1P53675 1640 aa14.88□□□□□ -0.03
PHGDH-224ENST00000641711 SLIT1O75093 1534 aa14.87□□□□□ -0.03
PHGDH-224ENST00000641711 TMEM131LA2VDJ0 1609 aa14.87□□□□□ -0.03
PHGDH-224ENST00000641711 THEMISQ8N1K5 641 aaPredicted RBP14.86□□□□□ -0.03
PHGDH-224ENST00000641711 ARHGAP23Q9P227 1491 aa14.86□□□□□ -0.03
PHGDH-224ENST00000641711 MYO5BQ9ULV0 1848 aa14.85□□□□□ -0.03
PHGDH-224ENST00000641711 CCDC144AA2RUR9 1427 aa14.84□□□□□ -0.03
PHGDH-224ENST00000641711 IDI1Q13907 227 aa14.84□□□□□ -0.03
PHGDH-224ENST00000641711 STRCQ7RTU9 1775 aa14.82□□□□□ -0.04
PHGDH-224ENST00000641711 ANKRD30BQ9BXX2 1392 aa14.82□□□□□ -0.04
PHGDH-224ENST00000641711 TMEM2Q9UHN6 1383 aa14.81□□□□□ -0.04
PHGDH-224ENST00000641711 DIEXFQ68CQ4 756 aaKnown RBP14.8□□□□□ -0.04
PHGDH-224ENST00000641711 STAG3Q9UJ98 1225 aa14.8□□□□□ -0.04
PHGDH-224ENST00000641711 TIMELESSQ9UNS1 1208 aa14.8□□□□□ -0.04
PHGDH-224ENST00000641711 MED14O60244 1454 aa14.8□□□□□ -0.04
PHGDH-224ENST00000641711 SCAF11Q99590 1463 aaKnown RBP14.8□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 107 ms