RNA–Protein interactions for RNA: ENST00000641491.1

PHGDH-218, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 986 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-218ENST00000641491 TRIM52Q96A61 297 aa19.2■□□□□ 0.66
PHGDH-218ENST00000641491 NAIPQ13075 1403 aa19.19■□□□□ 0.66
PHGDH-218ENST00000641491 ABCA6Q8N139 1617 aa19.19■□□□□ 0.66
PHGDH-218ENST00000641491 ESF1Q9H501 851 aaKnown RBP19.19■□□□□ 0.66
PHGDH-218ENST00000641491 KANK1Q14678 1352 aa19.19■□□□□ 0.66
PHGDH-218ENST00000641491 KIF3BO15066 747 aa19.18■□□□□ 0.66
PHGDH-218ENST00000641491 GCC2Q8IWJ2 1684 aa19.17■□□□□ 0.66
PHGDH-218ENST00000641491 SOCS7O14512 581 aa19.17■□□□□ 0.66
PHGDH-218ENST00000641491 RAB3GAP2Q9H2M9 1393 aa19.16■□□□□ 0.66
PHGDH-218ENST00000641491 ILDR2Q71H61 639 aa19.15■□□□□ 0.66
PHGDH-218ENST00000641491 GRWD1Q9BQ67 446 aaKnown RBP eCLIP19.15■□□□□ 0.665e-16■■□□□ 13.6
PHGDH-218ENST00000641491 GGT6Q6P531 493 aa19.14■□□□□ 0.65
PHGDH-218ENST00000641491 RIMS1Q86UR5 1692 aaKnown RBP19.14■□□□□ 0.65
PHGDH-218ENST00000641491 EIF2AK4Q9P2K8 1649 aaKnown RBP19.12■□□□□ 0.65
PHGDH-218ENST00000641491 REREQ9P2R6 1566 aa19.12■□□□□ 0.65
PHGDH-218ENST00000641491 DISP3Q9P2K9 1392 aa19.12■□□□□ 0.65
PHGDH-218ENST00000641491 MLECQ14165 292 aa19.12■□□□□ 0.65
PHGDH-218ENST00000641491 HRCP23327 699 aa19.1■□□□□ 0.65
PHGDH-218ENST00000641491 PLPPR3Q6T4P5 718 aa19.1■□□□□ 0.65
PHGDH-218ENST00000641491 NUP155O75694 1391 aa19.08■□□□□ 0.65
PHGDH-218ENST00000641491 AGLP35573 1532 aa19.08■□□□□ 0.64
PHGDH-218ENST00000641491 WASHC2CQ9Y4E1 1318 aa19.06■□□□□ 0.64
PHGDH-218ENST00000641491 PPP6R1Q9UPN7 881 aa19.05■□□□□ 0.64
PHGDH-218ENST00000641491 SLC4A1APQ9BWU0 796 aaKnown RBP19.04■□□□□ 0.64
PHGDH-218ENST00000641491 DMRT2Q9Y5R5 561 aa19.02■□□□□ 0.64
PHGDH-218ENST00000641491 RNF17Q9BXT8 1623 aaKnown RBP19■□□□□ 0.63
PHGDH-218ENST00000641491 UNC13BO14795 1591 aa19■□□□□ 0.63
PHGDH-218ENST00000641491 PRDM15P57071 1507 aaPredicted RBP19■□□□□ 0.63
PHGDH-218ENST00000641491 KDM5DQ9BY66 1539 aa18.99■□□□□ 0.63
PHGDH-218ENST00000641491 FAM135AQ9P2D6 1515 aa18.99■□□□□ 0.63
PHGDH-218ENST00000641491 CNTLNQ9NXG0 1405 aa18.99■□□□□ 0.63
PHGDH-218ENST00000641491 CCER1Q8TC90 406 aaPredicted RBP18.98■□□□□ 0.63
PHGDH-218ENST00000641491 MPHOSPH9Q99550 1183 aa18.96■□□□□ 0.63
PHGDH-218ENST00000641491 DEPDC5O75140 1603 aa18.96■□□□□ 0.63
PHGDH-218ENST00000641491 SIGLEC1Q9BZZ2 1709 aa18.95■□□□□ 0.62
PHGDH-218ENST00000641491 ZC3H13Q5T200 1668 aaKnown RBP18.94■□□□□ 0.62
PHGDH-218ENST00000641491 PKD2Q13563 968 aa18.93■□□□□ 0.62
PHGDH-218ENST00000641491 FER1L4A9Z1Z3 1794 aa18.93■□□□□ 0.62
PHGDH-218ENST00000641491 IQGAP3Q86VI3 1631 aa18.92■□□□□ 0.62
PHGDH-218ENST00000641491 ABCC3O15438 1527 aa18.92■□□□□ 0.62
PHGDH-218ENST00000641491 CEBPAP49715 358 aaPredicted RBP18.92■□□□□ 0.62
PHGDH-218ENST00000641491 LMTK2Q8IWU2 1503 aa18.9■□□□□ 0.62
PHGDH-218ENST00000641491 MROH1Q8NDA8 1641 aa18.89■□□□□ 0.62
PHGDH-218ENST00000641491 PREX1Q8TCU6 1659 aa18.89■□□□□ 0.61
PHGDH-218ENST00000641491 SETD1BQ9UPS6 1966 aaKnown RBP18.88■□□□□ 0.61
PHGDH-218ENST00000641491 PZPP20742 1482 aa18.88■□□□□ 0.61
PHGDH-218ENST00000641491 TET3O43151 1660 aa18.88■□□□□ 0.61
PHGDH-218ENST00000641491 STRCQ7RTU9 1775 aa18.88■□□□□ 0.61
PHGDH-218ENST00000641491 VWDEQ8N2E2 1590 aa18.87■□□□□ 0.61
PHGDH-218ENST00000641491 CEP152O94986 1710 aa18.86■□□□□ 0.61
PHGDH-218ENST00000641491 CLTCQ00610 1675 aaKnown RBP18.86■□□□□ 0.61
PHGDH-218ENST00000641491 SPATA31D1Q6ZQQ2 1576 aa18.86■□□□□ 0.61
PHGDH-218ENST00000641491 EFCAB6Q5THR3 1501 aa18.86■□□□□ 0.61
PHGDH-218ENST00000641491 DHX57Q6P158 1386 aaKnown RBP18.86■□□□□ 0.61
PHGDH-218ENST00000641491 RPRD2Q5VT52 1461 aaKnown RBP18.85■□□□□ 0.61
PHGDH-218ENST00000641491 PTPRTO14522 1441 aa18.85■□□□□ 0.61
PHGDH-218ENST00000641491 UHRF1BP1Q6BDS2 1440 aa18.85■□□□□ 0.61
PHGDH-218ENST00000641491 CAMSAP1Q5T5Y3 1602 aa18.85■□□□□ 0.61
PHGDH-218ENST00000641491 ZMYM3Q14202 1370 aa18.84■□□□□ 0.61
PHGDH-218ENST00000641491 ARHGAP31Q2M1Z3 1444 aa18.83■□□□□ 0.6
PHGDH-218ENST00000641491 FOXD1Q16676 465 aa18.82■□□□□ 0.6
PHGDH-218ENST00000641491 NPATQ14207 1427 aa18.81■□□□□ 0.6
PHGDH-218ENST00000641491 CLSPNQ9HAW4 1339 aa18.8■□□□□ 0.6
PHGDH-218ENST00000641491 MROH2AA6NES4 1674 aa18.8■□□□□ 0.6
PHGDH-218ENST00000641491 STAG3Q9UJ98 1225 aa18.8■□□□□ 0.6
PHGDH-218ENST00000641491 CCDC144AA2RUR9 1427 aa18.8■□□□□ 0.6
PHGDH-218ENST00000641491 IQSEC2Q5JU85 1478 aa18.78■□□□□ 0.6
PHGDH-218ENST00000641491 LTBP4Q8N2S1 1624 aa18.76■□□□□ 0.59
PHGDH-218ENST00000641491 CHGAP10645 457 aaKnown RBP18.76■□□□□ 0.59
PHGDH-218ENST00000641491 TNRQ92752 1358 aa18.76■□□□□ 0.59
PHGDH-218ENST00000641491 E9PCH4 1651 aa18.76■□□□□ 0.59
PHGDH-218ENST00000641491 NEUROD1Q13562 356 aa18.75■□□□□ 0.59
PHGDH-218ENST00000641491 SLC52A1Q9NWF4 448 aa18.75■□□□□ 0.59
PHGDH-218ENST00000641491 ERVK-7P63135 1459 aa18.75■□□□□ 0.59
PHGDH-218ENST00000641491 FBXO31Q5XUX0 539 aaPredicted RBP18.73■□□□□ 0.59
PHGDH-218ENST00000641491 TRPM2O94759 1503 aa18.73■□□□□ 0.59
PHGDH-218ENST00000641491 ANKRD30BQ9BXX2 1392 aa18.71■□□□□ 0.59
PHGDH-218ENST00000641491 SPHKAPQ2M3C7 1700 aa18.71■□□□□ 0.59
PHGDH-218ENST00000641491 TONSLQ96HA7 1378 aa18.7■□□□□ 0.58
PHGDH-218ENST00000641491 ZNF326Q5BKZ1 582 aaKnown RBP18.7■□□□□ 0.58
PHGDH-218ENST00000641491 C3P01024 1663 aa18.69■□□□□ 0.58
PHGDH-218ENST00000641491 NOS1P29475 1434 aa18.69■□□□□ 0.58
PHGDH-218ENST00000641491 NLRP1Q9C000 1473 aa18.67■□□□□ 0.58
PHGDH-218ENST00000641491 ZEB1P37275 1124 aaPredicted RBP18.64■□□□□ 0.57
PHGDH-218ENST00000641491 SIN3AQ96ST3 1273 aa18.64■□□□□ 0.57
PHGDH-218ENST00000641491 UBAP1LF5GYI3 381 aa18.63■□□□□ 0.57
PHGDH-218ENST00000641491 HDGFP51858 240 aaKnown RBP18.63■□□□□ 0.57
PHGDH-218ENST00000641491 RGL3Q3MIN7 710 aa18.63■□□□□ 0.57
PHGDH-218ENST00000641491 IDI1Q13907 227 aa18.62■□□□□ 0.57
PHGDH-218ENST00000641491 PLA2R1Q13018 1463 aa18.62■□□□□ 0.57
PHGDH-218ENST00000641491 SYNMO15061 1565 aa18.62■□□□□ 0.57
PHGDH-218ENST00000641491 CFAP65Q6ZU64 1925 aaKnown RBP18.62■□□□□ 0.57
PHGDH-218ENST00000641491 PPP1R15AO75807 674 aaPredicted RBP18.61■□□□□ 0.57
PHGDH-218ENST00000641491 CLTCL1P53675 1640 aa18.6■□□□□ 0.57
PHGDH-218ENST00000641491 UGGT1Q9NYU2 1555 aa18.6■□□□□ 0.57
PHGDH-218ENST00000641491 ZNF335Q9H4Z2 1342 aaPredicted RBP18.6■□□□□ 0.57
PHGDH-218ENST00000641491 THEMISQ8N1K5 641 aaPredicted RBP18.6■□□□□ 0.57
PHGDH-218ENST00000641491 TIMELESSQ9UNS1 1208 aa18.59■□□□□ 0.57
PHGDH-218ENST00000641491 ADGRB3O60242 1522 aa18.59■□□□□ 0.57
PHGDH-218ENST00000641491 A2ML1A8K2U0 1454 aa18.58■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms