RNA–Protein interactions for RNA: ENST00000641455.1

PHGDH-217, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 312 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-217ENST00000641455 CFDP1Q9UEE9 299 aaPredicted RBP12.92□□□□□ -0.34
PHGDH-217ENST00000641455 GPATCH8Q9UKJ3 1502 aaKnown RBP12.92□□□□□ -0.34
PHGDH-217ENST00000641455 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP12.92□□□□□ -0.34
PHGDH-217ENST00000641455 NPHP4O75161 1426 aaPredicted RBP12.91□□□□□ -0.34
PHGDH-217ENST00000641455 FBXO31Q5XUX0 539 aaPredicted RBP12.91□□□□□ -0.34
PHGDH-217ENST00000641455 KIAA1107Q9UPP5 1409 aa12.9□□□□□ -0.34
PHGDH-217ENST00000641455 RNF17Q9BXT8 1623 aaKnown RBP12.89□□□□□ -0.35
PHGDH-217ENST00000641455 THEMISQ8N1K5 641 aaPredicted RBP12.89□□□□□ -0.35
PHGDH-217ENST00000641455 CCNB3Q8WWL7 1395 aa12.89□□□□□ -0.35
PHGDH-217ENST00000641455 RGS17Q9UGC6 210 aaPredicted RBP12.88□□□□□ -0.35
PHGDH-217ENST00000641455 IQGAP1P46940 1657 aa12.88□□□□□ -0.35
PHGDH-217ENST00000641455 FAM135AQ9P2D6 1515 aa12.88□□□□□ -0.35
PHGDH-217ENST00000641455 UGGT1Q9NYU2 1555 aa12.87□□□□□ -0.35
PHGDH-217ENST00000641455 PZPP20742 1482 aa12.87□□□□□ -0.35
PHGDH-217ENST00000641455 LRRC7Q96NW7 1537 aa12.87□□□□□ -0.35
PHGDH-217ENST00000641455 KIF3BO15066 747 aa12.86□□□□□ -0.35
PHGDH-217ENST00000641455 DEPDC5O75140 1603 aa12.86□□□□□ -0.35
PHGDH-217ENST00000641455 KDM5DQ9BY66 1539 aa12.86□□□□□ -0.35
PHGDH-217ENST00000641455 SYNMO15061 1565 aa12.86□□□□□ -0.35
PHGDH-217ENST00000641455 FYCO1Q9BQS8 1478 aa12.85□□□□□ -0.35
PHGDH-217ENST00000641455 STRCP1A6NGW2 1772 aa12.85□□□□□ -0.35
PHGDH-217ENST00000641455 WASHC2CQ9Y4E1 1318 aa12.85□□□□□ -0.35
PHGDH-217ENST00000641455 MED14O60244 1454 aa12.85□□□□□ -0.35
PHGDH-217ENST00000641455 NLRP1Q9C000 1473 aa12.85□□□□□ -0.35
PHGDH-217ENST00000641455 DHX29Q7Z478 1369 aaKnown RBP12.83□□□□□ -0.36
PHGDH-217ENST00000641455 MIA2Q96PC5 1412 aa12.83□□□□□ -0.36
PHGDH-217ENST00000641455 CHIC1Q5VXU3 224 aa12.83□□□□□ -0.36
PHGDH-217ENST00000641455 POTEAQ6S8J7 498 aa12.82□□□□□ -0.36
PHGDH-217ENST00000641455 ZNF644Q9H582 1327 aaPredicted RBP12.82□□□□□ -0.36
PHGDH-217ENST00000641455 MTUS2Q5JR59 1369 aa12.81□□□□□ -0.36
PHGDH-217ENST00000641455 RTEL1-TNFRSF6BF6WH68 1400 aa12.79□□□□□ -0.36
PHGDH-217ENST00000641455 SETD1AO15047 1707 aaKnown RBP12.79□□□□□ -0.36
PHGDH-217ENST00000641455 MBD5Q9P267 1494 aa12.78□□□□□ -0.36
PHGDH-217ENST00000641455 TIAM1Q13009 1591 aa12.77□□□□□ -0.37
PHGDH-217ENST00000641455 ZC3H13Q5T200 1668 aaKnown RBP12.76□□□□□ -0.37
PHGDH-217ENST00000641455 CCDC141Q6ZP82 1450 aa12.75□□□□□ -0.37
PHGDH-217ENST00000641455 SCAF11Q99590 1463 aaKnown RBP12.74□□□□□ -0.37
PHGDH-217ENST00000641455 XIRP1Q702N8 1843 aaKnown RBP12.74□□□□□ -0.37
PHGDH-217ENST00000641455 FAM135BQ49AJ0 1406 aa12.72□□□□□ -0.37
PHGDH-217ENST00000641455 TXNDC2Q86VQ3 553 aa12.72□□□□□ -0.37
PHGDH-217ENST00000641455 CFAP65Q6ZU64 1925 aaKnown RBP12.72□□□□□ -0.37
PHGDH-217ENST00000641455 EHBP1L1Q8N3D4 1523 aa12.72□□□□□ -0.37
PHGDH-217ENST00000641455 ERVK-7P63135 1459 aa12.72□□□□□ -0.37
PHGDH-217ENST00000641455 UBR1Q8IWV7 1749 aa12.71□□□□□ -0.37
PHGDH-217ENST00000641455 ABCC3O15438 1527 aa12.71□□□□□ -0.38
PHGDH-217ENST00000641455 ROBO1Q9Y6N7 1651 aa12.7□□□□□ -0.38
PHGDH-217ENST00000641455 CAMSAP2Q08AD1 1489 aa12.7□□□□□ -0.38
PHGDH-217ENST00000641455 LTKP29376 864 aa12.69□□□□□ -0.38
PHGDH-217ENST00000641455 EID1Q9Y6B2 187 aa12.69□□□□□ -0.38
PHGDH-217ENST00000641455 TMEM94Q12767 1356 aa12.69□□□□□ -0.38
PHGDH-217ENST00000641455 TSPY4P0CV99 314 aa12.68□□□□□ -0.38
PHGDH-217ENST00000641455 TSPY10P0CW01 314 aa12.68□□□□□ -0.38
PHGDH-217ENST00000641455 RSPH4AQ5TD94 716 aa12.67□□□□□ -0.38
PHGDH-217ENST00000641455 TRIM52Q96A61 297 aa12.67□□□□□ -0.38
PHGDH-217ENST00000641455 CEP162Q5TB80 1403 aa12.67□□□□□ -0.38
PHGDH-217ENST00000641455 CEP152O94986 1710 aa12.67□□□□□ -0.38
PHGDH-217ENST00000641455 NCOA2Q15596 1464 aa12.66□□□□□ -0.38
PHGDH-217ENST00000641455 LRRC9Q6ZRR7 1453 aa12.66□□□□□ -0.38
PHGDH-217ENST00000641455 MEX3CQ5U5Q3 659 aaKnown RBP12.66□□□□□ -0.38
PHGDH-217ENST00000641455 PROSER2Q86WR7 435 aaPredicted RBP12.66□□□□□ -0.38
PHGDH-217ENST00000641455 UPF1Q92900 1129 aaKnown RBP eCLIP12.66□□□□□ -0.38
PHGDH-217ENST00000641455 RBM33Q96EV2 1170 aaKnown RBP12.66□□□□□ -0.38
PHGDH-217ENST00000641455 STAG3Q9UJ98 1225 aa12.66□□□□□ -0.38
PHGDH-217ENST00000641455 SLIT1O75093 1534 aa12.66□□□□□ -0.38
PHGDH-217ENST00000641455 ARHGAP23Q9P227 1491 aa12.65□□□□□ -0.38
PHGDH-217ENST00000641455 PHLPP1O60346 1717 aa12.65□□□□□ -0.38
PHGDH-217ENST00000641455 JCADQ9P266 1359 aa12.65□□□□□ -0.38
PHGDH-217ENST00000641455 ARHGEF5Q12774 1597 aa12.64□□□□□ -0.39
PHGDH-217ENST00000641455 MAP3K1Q13233 1512 aa12.62□□□□□ -0.39
PHGDH-217ENST00000641455 MSH6P52701 1360 aa12.62□□□□□ -0.39
PHGDH-217ENST00000641455 KCNA6P17658 529 aa12.62□□□□□ -0.39
PHGDH-217ENST00000641455 EIF2AK4Q9P2K8 1649 aaKnown RBP12.62□□□□□ -0.39
PHGDH-217ENST00000641455 ZNF772Q68DY9 489 aaPredicted RBP12.61□□□□□ -0.39
PHGDH-217ENST00000641455 BCANQ96GW7 911 aa12.61□□□□□ -0.39
PHGDH-217ENST00000641455 SLC26A8Q96RN1 970 aa12.61□□□□□ -0.39
PHGDH-217ENST00000641455 MROH1Q8NDA8 1641 aa12.61□□□□□ -0.39
PHGDH-217ENST00000641455 TMEM2Q9UHN6 1383 aa12.6□□□□□ -0.39
PHGDH-217ENST00000641455 PIK3C2BO00750 1634 aa12.6□□□□□ -0.39
PHGDH-217ENST00000641455 PRDM15P57071 1507 aaPredicted RBP12.59□□□□□ -0.39
PHGDH-217ENST00000641455 SLAIN2Q9P270 581 aa12.59□□□□□ -0.39
PHGDH-217ENST00000641455 LRP6O75581 1613 aa12.58□□□□□ -0.4
PHGDH-217ENST00000641455 NKTRP30414 1462 aaKnown RBP12.58□□□□□ -0.4
PHGDH-217ENST00000641455 MAST1Q9Y2H9 1570 aa12.57□□□□□ -0.4
PHGDH-217ENST00000641455 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.57□□□□□ -0.45e-16■■□□□ 13.6
PHGDH-217ENST00000641455 COL16A1Q07092 1604 aaPredicted RBP12.57□□□□□ -0.4
PHGDH-217ENST00000641455 SPATA31A6Q5VVP1 1343 aa12.57□□□□□ -0.4
PHGDH-217ENST00000641455 EFCAB6Q5THR3 1501 aa12.57□□□□□ -0.4
PHGDH-217ENST00000641455 RXRBP28702 533 aa12.56□□□□□ -0.4
PHGDH-217ENST00000641455 C14orf37Q86TY3 774 aa12.55□□□□□ -0.4
PHGDH-217ENST00000641455 NWD1Q149M9 1564 aa12.55□□□□□ -0.4
PHGDH-217ENST00000641455 ARHGAP31Q2M1Z3 1444 aa12.54□□□□□ -0.4
PHGDH-217ENST00000641455 DUOX2Q9NRD8 1548 aa12.54□□□□□ -0.4
PHGDH-217ENST00000641455 FGD6Q6ZV73 1430 aa12.54□□□□□ -0.4
PHGDH-217ENST00000641455 NUTM2BA6NNL0 878 aaPredicted RBP12.53□□□□□ -0.4
PHGDH-217ENST00000641455 NUTM2EB1AL46 878 aaPredicted RBP12.53□□□□□ -0.4
PHGDH-217ENST00000641455 NUTM2AQ8IVF1 878 aaPredicted RBP12.53□□□□□ -0.4
PHGDH-217ENST00000641455 TET3O43151 1660 aa12.53□□□□□ -0.4
PHGDH-217ENST00000641455 KDM5AP29375 1690 aaKnown RBP12.52□□□□□ -0.4
PHGDH-217ENST00000641455 IDI1Q13907 227 aa12.52□□□□□ -0.41
PHGDH-217ENST00000641455 KANK1Q14678 1352 aa12.52□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 158.1 ms