RNA–Protein interactions for RNA: ENST00000641115.1

PHGDH-210, Transcript of phosphoglycerate dehydrogenase, humanhuman

BASIC

Gene PHGDH, Length 1,638 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-210ENST00000641115 ATP10AO60312 1499 aa29.19■■■□□ 2.26
PHGDH-210ENST00000641115 REREQ9P2R6 1566 aa29.19■■■□□ 2.26
PHGDH-210ENST00000641115 NUP155O75694 1391 aa29.18■■■□□ 2.26
PHGDH-210ENST00000641115 PZPP20742 1482 aa29.16■■■□□ 2.26
PHGDH-210ENST00000641115 KIF3BO15066 747 aa29.16■■■□□ 2.26
PHGDH-210ENST00000641115 IQGAP3Q86VI3 1631 aa29.16■■■□□ 2.26
PHGDH-210ENST00000641115 RNF17Q9BXT8 1623 aaKnown RBP29.16■■■□□ 2.26
PHGDH-210ENST00000641115 CLSPNQ9HAW4 1339 aa29.15■■■□□ 2.26
PHGDH-210ENST00000641115 MPHOSPH9Q99550 1183 aa29.14■■■□□ 2.26
PHGDH-210ENST00000641115 PRDM15P57071 1507 aaPredicted RBP29.13■■■□□ 2.25
PHGDH-210ENST00000641115 FAM135AQ9P2D6 1515 aa29.13■■■□□ 2.25
PHGDH-210ENST00000641115 GRWD1Q9BQ67 446 aaKnown RBP eCLIP29.12■■■□□ 2.255e-16■■□□□ 13.6
PHGDH-210ENST00000641115 SLC4A1APQ9BWU0 796 aaKnown RBP29.12■■■□□ 2.25
PHGDH-210ENST00000641115 MROH1Q8NDA8 1641 aa29.11■■■□□ 2.25
PHGDH-210ENST00000641115 KANK1Q14678 1352 aa29.08■■■□□ 2.25
PHGDH-210ENST00000641115 AGLP35573 1532 aa29.07■■■□□ 2.24
PHGDH-210ENST00000641115 VWDEQ8N2E2 1590 aa29.05■■■□□ 2.24
PHGDH-210ENST00000641115 SIGLEC1Q9BZZ2 1709 aa29.03■■■□□ 2.24
PHGDH-210ENST00000641115 TET3O43151 1660 aa29.01■■■□□ 2.23
PHGDH-210ENST00000641115 ZEB1P37275 1124 aaPredicted RBP29■■■□□ 2.23
PHGDH-210ENST00000641115 GGT6Q6P531 493 aa29■■■□□ 2.23
PHGDH-210ENST00000641115 CEP152O94986 1710 aa29■■■□□ 2.23
PHGDH-210ENST00000641115 PKD2Q13563 968 aa28.99■■■□□ 2.23
PHGDH-210ENST00000641115 ZC3H13Q5T200 1668 aaKnown RBP28.98■■■□□ 2.23
PHGDH-210ENST00000641115 LMTK2Q8IWU2 1503 aa28.96■■■□□ 2.23
PHGDH-210ENST00000641115 FOXD1Q16676 465 aa28.94■■■□□ 2.22
PHGDH-210ENST00000641115 E9PCH4 1651 aa28.93■■■□□ 2.22
PHGDH-210ENST00000641115 ABCC3O15438 1527 aa28.92■■■□□ 2.22
PHGDH-210ENST00000641115 EFCAB6Q5THR3 1501 aa28.92■■■□□ 2.22
PHGDH-210ENST00000641115 WASHC2CQ9Y4E1 1318 aa28.89■■■□□ 2.22
PHGDH-210ENST00000641115 CAMSAP1Q5T5Y3 1602 aa28.89■■■□□ 2.22
PHGDH-210ENST00000641115 ANKRD30BQ9BXX2 1392 aa28.89■■■□□ 2.22
PHGDH-210ENST00000641115 ARID4BQ4LE39 1312 aaPredicted RBP28.89■■■□□ 2.21
PHGDH-210ENST00000641115 PPP6R1Q9UPN7 881 aa28.86■■■□□ 2.21
PHGDH-210ENST00000641115 SIN3AQ96ST3 1273 aa28.85■■■□□ 2.21
PHGDH-210ENST00000641115 SPHKAPQ2M3C7 1700 aa28.83■■■□□ 2.21
PHGDH-210ENST00000641115 NEUROD1Q13562 356 aa28.82■■■□□ 2.2
PHGDH-210ENST00000641115 MLECQ14165 292 aa28.82■■■□□ 2.2
PHGDH-210ENST00000641115 RPRD2Q5VT52 1461 aaKnown RBP28.82■■■□□ 2.2
PHGDH-210ENST00000641115 CLTCQ00610 1675 aaKnown RBP28.82■■■□□ 2.2
PHGDH-210ENST00000641115 NPATQ14207 1427 aa28.76■■■□□ 2.19
PHGDH-210ENST00000641115 ARHGAP31Q2M1Z3 1444 aa28.76■■■□□ 2.19
PHGDH-210ENST00000641115 TRPM2O94759 1503 aa28.76■■■□□ 2.19
PHGDH-210ENST00000641115 ESF1Q9H501 851 aaKnown RBP28.75■■■□□ 2.19
PHGDH-210ENST00000641115 CCDC144AA2RUR9 1427 aa28.75■■■□□ 2.19
PHGDH-210ENST00000641115 PLA2R1Q13018 1463 aa28.74■■■□□ 2.19
PHGDH-210ENST00000641115 PTPRTO14522 1441 aa28.73■■■□□ 2.19
PHGDH-210ENST00000641115 TONSLQ96HA7 1378 aa28.72■■■□□ 2.19
PHGDH-210ENST00000641115 CFAP65Q6ZU64 1925 aaKnown RBP28.72■■■□□ 2.19
PHGDH-210ENST00000641115 FER1L4A9Z1Z3 1794 aa28.71■■■□□ 2.19
PHGDH-210ENST00000641115 TIMELESSQ9UNS1 1208 aa28.71■■■□□ 2.19
PHGDH-210ENST00000641115 MROH2AA6NES4 1674 aa28.7■■■□□ 2.18
PHGDH-210ENST00000641115 CNTLNQ9NXG0 1405 aa28.69■■■□□ 2.18
PHGDH-210ENST00000641115 PREX1Q8TCU6 1659 aa28.68■■■□□ 2.18
PHGDH-210ENST00000641115 CLTCL1P53675 1640 aa28.66■■■□□ 2.18
PHGDH-210ENST00000641115 NOS1P29475 1434 aa28.63■■■□□ 2.17
PHGDH-210ENST00000641115 ZMYM3Q14202 1370 aa28.6■■■□□ 2.17
PHGDH-210ENST00000641115 KIF1BO60333 1816 aa28.6■■■□□ 2.17
PHGDH-210ENST00000641115 SYNMO15061 1565 aa28.6■■■□□ 2.17
PHGDH-210ENST00000641115 UGGT1Q9NYU2 1555 aa28.59■■■□□ 2.17
PHGDH-210ENST00000641115 ERVK-7P63135 1459 aa28.59■■■□□ 2.17
PHGDH-210ENST00000641115 PIK3C2BO00750 1634 aa28.57■■■□□ 2.16
PHGDH-210ENST00000641115 MADDQ8WXG6 1647 aa28.57■■■□□ 2.16
PHGDH-210ENST00000641115 SPATA31D1Q6ZQQ2 1576 aa28.57■■■□□ 2.16
PHGDH-210ENST00000641115 ADAMTSL3P82987 1691 aa28.56■■■□□ 2.16
PHGDH-210ENST00000641115 C3P01024 1663 aa28.55■■■□□ 2.16
PHGDH-210ENST00000641115 RIMS1Q86UR5 1692 aaKnown RBP28.54■■■□□ 2.16
PHGDH-210ENST00000641115 L3MBTL2Q969R5 705 aa28.53■■■□□ 2.16
PHGDH-210ENST00000641115 NEURL4Q96JN8 1562 aa28.53■■■□□ 2.16
PHGDH-210ENST00000641115 FBXO31Q5XUX0 539 aaPredicted RBP28.51■■■□□ 2.15
PHGDH-210ENST00000641115 SPATA31E1Q6ZUB1 1445 aa28.5■■■□□ 2.15
PHGDH-210ENST00000641115 SLC52A1Q9NWF4 448 aa28.48■■■□□ 2.15
PHGDH-210ENST00000641115 PPP1R15AO75807 674 aaPredicted RBP28.47■■■□□ 2.15
PHGDH-210ENST00000641115 ADGRB3O60242 1522 aa28.46■■■□□ 2.15
PHGDH-210ENST00000641115 RGL3Q3MIN7 710 aa28.45■■■□□ 2.14
PHGDH-210ENST00000641115 TNRQ92752 1358 aa28.42■■■□□ 2.14
PHGDH-210ENST00000641115 IDI1Q13907 227 aa28.41■■■□□ 2.14
PHGDH-210ENST00000641115 CHGAP10645 457 aaKnown RBP28.4■■■□□ 2.14
PHGDH-210ENST00000641115 DCAF11Q8TEB1 546 aa28.4■■■□□ 2.14
PHGDH-210ENST00000641115 CEBPAP49715 358 aaPredicted RBP28.39■■■□□ 2.13
PHGDH-210ENST00000641115 TMEM131LA2VDJ0 1609 aa28.39■■■□□ 2.13
PHGDH-210ENST00000641115 MYO5BQ9ULV0 1848 aa28.38■■■□□ 2.13
PHGDH-210ENST00000641115 IFT172Q9UG01 1749 aa28.38■■■□□ 2.13
PHGDH-210ENST00000641115 PLPPR3Q6T4P5 718 aa28.35■■■□□ 2.13
PHGDH-210ENST00000641115 KDM2AQ9Y2K7 1162 aa28.35■■■□□ 2.13
PHGDH-210ENST00000641115 ZNF326Q5BKZ1 582 aaKnown RBP28.34■■■□□ 2.13
PHGDH-210ENST00000641115 PPLO60437 1756 aa28.34■■■□□ 2.13
PHGDH-210ENST00000641115 UHRF1BP1Q6BDS2 1440 aa28.33■■■□□ 2.13
PHGDH-210ENST00000641115 KDM5AP29375 1690 aaKnown RBP28.33■■■□□ 2.13
PHGDH-210ENST00000641115 NLRP1Q9C000 1473 aa28.33■■■□□ 2.13
PHGDH-210ENST00000641115 STAC3Q96MF2 364 aa28.32■■■□□ 2.12
PHGDH-210ENST00000641115 STAG3Q9UJ98 1225 aa28.32■■■□□ 2.12
PHGDH-210ENST00000641115 MYO3AQ8NEV4 1616 aa28.3■■■□□ 2.12
PHGDH-210ENST00000641115 RPGRIP1LQ68CZ1 1315 aa28.29■■■□□ 2.12
PHGDH-210ENST00000641115 MYOM2P54296 1465 aa28.29■■■□□ 2.12
PHGDH-210ENST00000641115 PTPRMP28827 1452 aa28.28■■■□□ 2.12
PHGDH-210ENST00000641115 PRAG1Q86YV5 1406 aa28.28■■■□□ 2.12
PHGDH-210ENST00000641115 UBR1Q8IWV7 1749 aa28.27■■■□□ 2.12
PHGDH-210ENST00000641115 NBPF8Q3BBV2 869 aa28.27■■■□□ 2.12
PHGDH-210ENST00000641115 A2ML1A8K2U0 1454 aa28.27■■■□□ 2.12
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms