RNA–Protein interactions for RNA: ENST00000640880.1

SCARB2-224, Transcript of scavenger receptor class B member 2, humanhuman

TSL 4

Gene SCARB2, Length 554 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-224ENST00000640880 TRAK2O60296 914 aa11.94□□□□□ -0.5
SCARB2-224ENST00000640880 HRCP23327 699 aa11.94□□□□□ -0.5
SCARB2-224ENST00000640880 CLCN1P35523 988 aa11.94□□□□□ -0.5
SCARB2-224ENST00000640880 MCM6Q14566 821 aa11.93□□□□□ -0.5
SCARB2-224ENST00000640880 MDM2Q00987 491 aaPredicted RBP11.92□□□□□ -0.5
SCARB2-224ENST00000640880 CCDC82Q8N4S0 544 aa11.92□□□□□ -0.5
SCARB2-224ENST00000640880 TMUB1Q9BVT8 246 aa11.92□□□□□ -0.5
SCARB2-224ENST00000640880 GPCPD1Q9NPB8 672 aa11.92□□□□□ -0.5
SCARB2-224ENST00000640880 EN1Q05925 392 aaPredicted RBP11.91□□□□□ -0.5
SCARB2-224ENST00000640880 NPDC1Q9NQX5 325 aaPredicted RBP11.91□□□□□ -0.5
SCARB2-224ENST00000640880 MAP3K7O43318 606 aa11.9□□□□□ -0.5
SCARB2-224ENST00000640880 PTCD2Q8WV60 388 aaKnown RBP11.9□□□□□ -0.5
SCARB2-224ENST00000640880 SSTR3P32745 418 aaPredicted RBP11.88□□□□□ -0.51
SCARB2-224ENST00000640880 SKIV2LQ15477 1246 aaKnown RBP11.88□□□□□ -0.51
SCARB2-224ENST00000640880 PHOX2BQ99453 314 aa11.88□□□□□ -0.51
SCARB2-224ENST00000640880 EPAS1Q99814 870 aa11.88□□□□□ -0.51
SCARB2-224ENST00000640880 ANO8Q9HCE9 1232 aaPredicted RBP11.88□□□□□ -0.51
SCARB2-224ENST00000640880 ATP1B4Q9UN42 357 aaPredicted RBP11.88□□□□□ -0.51
SCARB2-224ENST00000640880 PHF14O94880 888 aa11.87□□□□□ -0.51
SCARB2-224ENST00000640880 RANGAP1P46060 587 aaPredicted RBP11.87□□□□□ -0.51
SCARB2-224ENST00000640880 RBM33Q96EV2 1170 aaKnown RBP11.87□□□□□ -0.51
SCARB2-224ENST00000640880 SEC24BO95487 1268 aa11.86□□□□□ -0.51
SCARB2-224ENST00000640880 PDIA4P13667 645 aaKnown RBP11.85□□□□□ -0.51
SCARB2-224ENST00000640880 BEGAINQ9BUH8 593 aa11.85□□□□□ -0.51
SCARB2-224ENST00000640880 PROSER2Q86WR7 435 aaPredicted RBP11.84□□□□□ -0.51
SCARB2-224ENST00000640880 TSR1Q2NL82 804 aaKnown RBP11.83□□□□□ -0.52
SCARB2-224ENST00000640880 COLQQ9Y215 455 aaPredicted RBP11.83□□□□□ -0.52
SCARB2-224ENST00000640880 PROCA1Q8NCQ7 364 aaPredicted RBP11.82□□□□□ -0.52
SCARB2-224ENST00000640880 CCDC180Q9P1Z9 1646 aa11.82□□□□□ -0.52
SCARB2-224ENST00000640880 SLC34A2O95436 690 aa11.81□□□□□ -0.52
SCARB2-224ENST00000640880 SLAIN1Q8ND83 568 aa11.81□□□□□ -0.52
SCARB2-224ENST00000640880 FAM217BQ9NTX9 383 aaPredicted RBP11.81□□□□□ -0.52
SCARB2-224ENST00000640880 POLR3EQ9NVU0 708 aa11.81□□□□□ -0.52
SCARB2-224ENST00000640880 ZNF777Q9ULD5 760 aaPredicted RBP11.81□□□□□ -0.52
SCARB2-224ENST00000640880 PCDHGA10Q9Y5H3 936 aa11.81□□□□□ -0.52
SCARB2-224ENST00000640880 RAD21O60216 631 aa11.8□□□□□ -0.52
SCARB2-224ENST00000640880 FAM161AQ3B820 660 aa11.8□□□□□ -0.52
SCARB2-224ENST00000640880 POM121Q96HA1 1249 aa11.8□□□□□ -0.52
SCARB2-224ENST00000640880 TYW1BQ6NUM6 668 aa11.79□□□□□ -0.52
SCARB2-224ENST00000640880 METTL3Q86U44 580 aaKnown RBP11.79□□□□□ -0.52
SCARB2-224ENST00000640880 NLRP7Q8WX94 980 aa11.79□□□□□ -0.52
SCARB2-224ENST00000640880 C3orf67Q6ZVT6 689 aa11.78□□□□□ -0.52
SCARB2-224ENST00000640880 ZBTB7CA1YPR0 619 aa11.76□□□□□ -0.53
SCARB2-224ENST00000640880 OATP04181 439 aa11.76□□□□□ -0.53
SCARB2-224ENST00000640880 MYSM1Q5VVJ2 828 aa11.76□□□□□ -0.53
SCARB2-224ENST00000640880 FNBP4Q8N3X1 1017 aaPredicted RBP11.76□□□□□ -0.53
SCARB2-224ENST00000640880 PELP1Q8IZL8 1130 aaKnown RBP11.75□□□□□ -0.53
SCARB2-224ENST00000640880 PADI6Q6TGC4 694 aa11.74□□□□□ -0.53
SCARB2-224ENST00000640880 FBXW7Q969H0 707 aa11.74□□□□□ -0.53
SCARB2-224ENST00000640880 CCDC97Q96F63 343 aaPredicted RBP11.74□□□□□ -0.53
SCARB2-224ENST00000640880 GNL3Q9BVP2 549 aaKnown RBP eCLIP11.74□□□□□ -0.53
SCARB2-224ENST00000640880 SPDYE5A6NIY4 337 aa11.73□□□□□ -0.53
SCARB2-224ENST00000640880 CLK2P49760 499 aaKnown RBP11.73□□□□□ -0.53
SCARB2-224ENST00000640880 PXYLP1Q8TE99 480 aa11.73□□□□□ -0.53
SCARB2-224ENST00000640880 ADGRG1Q9Y653 693 aa11.73□□□□□ -0.53
SCARB2-224ENST00000640880 SERPINA10Q9UK55 444 aa11.72□□□□□ -0.53
SCARB2-224ENST00000640880 NPM2Q86SE8 214 aaKnown RBP11.71□□□□□ -0.53
SCARB2-224ENST00000640880 JPH4Q96JJ6 628 aa11.71□□□□□ -0.53
SCARB2-224ENST00000640880 PCDHGA4Q9Y5G9 962 aa11.71□□□□□ -0.53
SCARB2-224ENST00000640880 CERKQ8TCT0 537 aa11.7□□□□□ -0.54
SCARB2-224ENST00000640880 COG6Q9Y2V7 657 aa11.7□□□□□ -0.54
SCARB2-224ENST00000640880 POTEFA5A3E0 1075 aa11.69□□□□□ -0.54
SCARB2-224ENST00000640880 SLC39A7Q92504 469 aa11.69□□□□□ -0.54
SCARB2-224ENST00000640880 NECTIN2Q92692 538 aa11.69□□□□□ -0.54
SCARB2-224ENST00000640880 TBC1D2Q9BYX2 928 aa11.69□□□□□ -0.54
SCARB2-224ENST00000640880 RFC5P40937 340 aa11.68□□□□□ -0.54
SCARB2-224ENST00000640880 BANK1Q8NDB2 785 aa11.68□□□□□ -0.54
SCARB2-224ENST00000640880 C6orf132Q5T0Z8 1188 aa11.67□□□□□ -0.54
SCARB2-224ENST00000640880 SNRKQ9NRH2 765 aa11.67□□□□□ -0.54
SCARB2-224ENST00000640880 DIXDC1Q155Q3 683 aa11.66□□□□□ -0.54
SCARB2-224ENST00000640880 FOSBP53539 338 aa11.65□□□□□ -0.54
SCARB2-224ENST00000640880 RBM27Q9P2N5 1060 aaKnown RBP11.65□□□□□ -0.54
SCARB2-224ENST00000640880 CCDC9Q9Y3X0 531 aaKnown RBP11.65□□□□□ -0.54
SCARB2-224ENST00000640880 C7P10643 843 aa11.64□□□□□ -0.55
SCARB2-224ENST00000640880 TTC13Q8NBP0 860 aa11.64□□□□□ -0.55
SCARB2-224ENST00000640880 PLSCR2Q9NRY7 297 aa11.64□□□□□ -0.55
SCARB2-224ENST00000640880 ZNF330Q9Y3S2 320 aaPredicted RBP11.64□□□□□ -0.55
SCARB2-224ENST00000640880 KDM4FA0A1W2PPD8 638 aa11.63□□□□□ -0.55
SCARB2-224ENST00000640880 FBXO31Q5XUX0 539 aaPredicted RBP11.63□□□□□ -0.55
SCARB2-224ENST00000640880 LIMD1Q9UGP4 676 aa11.63□□□□□ -0.55
SCARB2-224ENST00000640880 METRNQ9UJH8 293 aa11.63□□□□□ -0.55
SCARB2-224ENST00000640880 POTEB2H3BUK9 544 aa11.62□□□□□ -0.55
SCARB2-224ENST00000640880 TMEM259Q4ZIN3 620 aa11.62□□□□□ -0.55
SCARB2-224ENST00000640880 RBM46Q8TBY0 533 aaKnown RBP11.62□□□□□ -0.55
SCARB2-224ENST00000640880 ZDHHC16Q969W1 377 aa11.62□□□□□ -0.55
SCARB2-224ENST00000640880 ZNF454Q8N9F8 522 aa11.61□□□□□ -0.55
SCARB2-224ENST00000640880 TRAIPQ9BWF2 469 aa11.61□□□□□ -0.55
SCARB2-224ENST00000640880 PPP2R2DQ66LE6 453 aa11.6□□□□□ -0.55
SCARB2-224ENST00000640880 RIC3Q7Z5B4 369 aa11.6□□□□□ -0.55
SCARB2-224ENST00000640880 PRSS12P56730 875 aa11.59□□□□□ -0.55
SCARB2-224ENST00000640880 SPIRE2Q8WWL2 714 aa11.59□□□□□ -0.55
SCARB2-224ENST00000640880 OTUD5Q96G74 571 aa11.59□□□□□ -0.55
SCARB2-224ENST00000640880 EIF2AK3Q9NZJ5 1116 aaKnown RBP11.59□□□□□ -0.55
SCARB2-224ENST00000640880 MTMR14Q8NCE2 650 aa11.57□□□□□ -0.56
SCARB2-224ENST00000640880 CDCA7LQ96GN5 454 aa11.57□□□□□ -0.56
SCARB2-224ENST00000640880 ADAM33Q9BZ11 813 aa11.57□□□□□ -0.56
SCARB2-224ENST00000640880 GDPD2Q9HCC8 539 aa11.57□□□□□ -0.56
SCARB2-224ENST00000640880 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP11.56□□□□□ -0.56
SCARB2-224ENST00000640880 WWC1Q8IX03 1113 aa11.55□□□□□ -0.56
SCARB2-224ENST00000640880 KCTD17Q8N5Z5 321 aa11.55□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms