RNA–Protein interactions for RNA: ENST00000640840.1

PRICKLE1-220, Transcript of prickle planar cell polarity protein 1, humanhuman

TSL 5

Gene PRICKLE1, Length 3,735 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRICKLE1-220ENST00000640840 PTPRMP28827 1452 aa8.89□□□□□ -0.99
PRICKLE1-220ENST00000640840 PRDM15P57071 1507 aaPredicted RBP8.89□□□□□ -0.99
PRICKLE1-220ENST00000640840 CLTCQ00610 1675 aaKnown RBP8.89□□□□□ -0.99
PRICKLE1-220ENST00000640840 NCOA1Q15788 1441 aa8.88□□□□□ -0.99
PRICKLE1-220ENST00000640840 ERBINQ96RT1 1412 aa8.88□□□□□ -0.99
PRICKLE1-220ENST00000640840 GCC2Q8IWJ2 1684 aa8.88□□□□□ -0.99
PRICKLE1-220ENST00000640840 UNC13BO14795 1591 aa8.87□□□□□ -0.99
PRICKLE1-220ENST00000640840 ERICH6Q7L0X2 663 aa8.87□□□□□ -0.99
PRICKLE1-220ENST00000640840 ROCK1Q13464 1354 aa8.87□□□□□ -0.99
PRICKLE1-220ENST00000640840 TRIM26Q12899 539 aaPredicted RBP8.87□□□□□ -0.99
PRICKLE1-220ENST00000640840 CEP152O94986 1710 aa8.85□□□□□ -0.99
PRICKLE1-220ENST00000640840 GTF3C3Q9Y5Q9 886 aa8.85□□□□□ -0.99
PRICKLE1-220ENST00000640840 PREX1Q8TCU6 1659 aa8.85□□□□□ -0.99
PRICKLE1-220ENST00000640840 ACIN1Q9UKV3 1341 aaKnown RBP8.85□□□□□ -0.99
PRICKLE1-220ENST00000640840 LMTK2Q8IWU2 1503 aa8.85□□□□□ -0.99
PRICKLE1-220ENST00000640840 CAMSAP1Q5T5Y3 1602 aa8.85□□□□□ -0.99
PRICKLE1-220ENST00000640840 ZNF142P52746 1687 aaPredicted RBP8.84□□□□□ -0.99
PRICKLE1-220ENST00000640840 ABCC3O15438 1527 aa8.84□□□□□ -0.99
PRICKLE1-220ENST00000640840 CNTLNQ9NXG0 1405 aa8.84□□□□□ -0.99
PRICKLE1-220ENST00000640840 KIF15Q9NS87 1388 aa8.83□□□□□ -1
PRICKLE1-220ENST00000640840 PPP6R1Q9UPN7 881 aa8.83□□□□□ -1
PRICKLE1-220ENST00000640840 IQGAP3Q86VI3 1631 aa8.82□□□□□ -1
PRICKLE1-220ENST00000640840 TSPY4P0CV99 314 aa8.82□□□□□ -1
PRICKLE1-220ENST00000640840 TSPY10P0CW01 314 aa8.82□□□□□ -1
PRICKLE1-220ENST00000640840 ANKRD30AQ9BXX3 1397 aa8.82□□□□□ -1
PRICKLE1-220ENST00000640840 MYO3AQ8NEV4 1616 aa8.81□□□□□ -1
PRICKLE1-220ENST00000640840 LMTK3Q96Q04 1460 aa8.81□□□□□ -1
PRICKLE1-220ENST00000640840 NPATQ14207 1427 aa8.81□□□□□ -1
PRICKLE1-220ENST00000640840 SPATA31D1Q6ZQQ2 1576 aa8.81□□□□□ -1
PRICKLE1-220ENST00000640840 PZPP20742 1482 aa8.8□□□□□ -1
PRICKLE1-220ENST00000640840 TET3O43151 1660 aa8.8□□□□□ -1
PRICKLE1-220ENST00000640840 ARHGAP31Q2M1Z3 1444 aa8.8□□□□□ -1
PRICKLE1-220ENST00000640840 EFCAB6Q5THR3 1501 aa8.79□□□□□ -1
PRICKLE1-220ENST00000640840 ARID4BQ4LE39 1312 aaPredicted RBP8.79□□□□□ -1
PRICKLE1-220ENST00000640840 HFM1A2PYH4 1435 aa8.79□□□□□ -1
PRICKLE1-220ENST00000640840 NAIPQ13075 1403 aa8.79□□□□□ -1
PRICKLE1-220ENST00000640840 SETD1BQ9UPS6 1966 aaKnown RBP8.79□□□□□ -1
PRICKLE1-220ENST00000640840 KDM5AP29375 1690 aaKnown RBP8.78□□□□□ -1
PRICKLE1-220ENST00000640840 ANKRD50Q9ULJ7 1429 aa8.78□□□□□ -1
PRICKLE1-220ENST00000640840 ZMYM3Q14202 1370 aa8.78□□□□□ -1
PRICKLE1-220ENST00000640840 E9PCH4 1651 aa8.78□□□□□ -1
PRICKLE1-220ENST00000640840 STRCQ7RTU9 1775 aa8.77□□□□□ -1.01
PRICKLE1-220ENST00000640840 FAM50AQ14320 339 aaKnown RBP8.77□□□□□ -1.01
PRICKLE1-220ENST00000640840 PIK3C2BO00750 1634 aa8.77□□□□□ -1.01
PRICKLE1-220ENST00000640840 RRP7BPQ9NSQ0 103 aa8.76□□□□□ -1.01
PRICKLE1-220ENST00000640840 SYNMO15061 1565 aa8.76□□□□□ -1.01
PRICKLE1-220ENST00000640840 KIF3BO15066 747 aa8.75□□□□□ -1.01
PRICKLE1-220ENST00000640840 ZEB1P37275 1124 aaPredicted RBP8.75□□□□□ -1.01
PRICKLE1-220ENST00000640840 ERVK-7P63135 1459 aa8.75□□□□□ -1.01
PRICKLE1-220ENST00000640840 MYT1LQ9UL68 1186 aa8.75□□□□□ -1.01
PRICKLE1-220ENST00000640840 CEP170BQ9Y4F5 1589 aaPredicted RBP8.75□□□□□ -1.01
PRICKLE1-220ENST00000640840 RPRD2Q5VT52 1461 aaKnown RBP8.75□□□□□ -1.01
PRICKLE1-220ENST00000640840 UBR1Q8IWV7 1749 aa8.74□□□□□ -1.01
PRICKLE1-220ENST00000640840 MLECQ14165 292 aa8.74□□□□□ -1.01
PRICKLE1-220ENST00000640840 CHIC2Q9UKJ5 165 aa8.74□□□□□ -1.01
PRICKLE1-220ENST00000640840 NOS1P29475 1434 aa8.73□□□□□ -1.01
PRICKLE1-220ENST00000640840 SPHKAPQ2M3C7 1700 aa8.72□□□□□ -1.01
PRICKLE1-220ENST00000640840 GGT6Q6P531 493 aa8.72□□□□□ -1.01
PRICKLE1-220ENST00000640840 POLR1AO95602 1720 aaPredicted RBP8.72□□□□□ -1.01
PRICKLE1-220ENST00000640840 CEBPAP49715 358 aaPredicted RBP8.72□□□□□ -1.01
PRICKLE1-220ENST00000640840 A2ML1A8K2U0 1454 aa8.71□□□□□ -1.01
PRICKLE1-220ENST00000640840 NLRP1Q9C000 1473 aa8.71□□□□□ -1.01
PRICKLE1-220ENST00000640840 PLA2R1Q13018 1463 aa8.7□□□□□ -1.02
PRICKLE1-220ENST00000640840 WASHC2CQ9Y4E1 1318 aa8.7□□□□□ -1.02
PRICKLE1-220ENST00000640840 UHRF1BP1Q6BDS2 1440 aa8.7□□□□□ -1.02
PRICKLE1-220ENST00000640840 NEURL4Q96JN8 1562 aa8.69□□□□□ -1.02
PRICKLE1-220ENST00000640840 PTPRTO14522 1441 aa8.69□□□□□ -1.02
PRICKLE1-220ENST00000640840 MYO5BQ9ULV0 1848 aa8.69□□□□□ -1.02
PRICKLE1-220ENST00000640840 TMEM131LA2VDJ0 1609 aa8.69□□□□□ -1.02
PRICKLE1-220ENST00000640840 CFAP65Q6ZU64 1925 aaKnown RBP8.69□□□□□ -1.02
PRICKLE1-220ENST00000640840 KANK1Q14678 1352 aa8.68□□□□□ -1.02
PRICKLE1-220ENST00000640840 TNRQ92752 1358 aa8.68□□□□□ -1.02
PRICKLE1-220ENST00000640840 SLIT1O75093 1534 aa8.68□□□□□ -1.02
PRICKLE1-220ENST00000640840 TRPM2O94759 1503 aa8.68□□□□□ -1.02
PRICKLE1-220ENST00000640840 ARHGAP23Q9P227 1491 aa8.67□□□□□ -1.02
PRICKLE1-220ENST00000640840 ADGRB3O60242 1522 aa8.67□□□□□ -1.02
PRICKLE1-220ENST00000640840 FBXO31Q5XUX0 539 aaPredicted RBP8.67□□□□□ -1.02
PRICKLE1-220ENST00000640840 UGGT1Q9NYU2 1555 aa8.66□□□□□ -1.02
PRICKLE1-220ENST00000640840 CLTCL1P53675 1640 aa8.66□□□□□ -1.02
PRICKLE1-220ENST00000640840 MED14O60244 1454 aa8.66□□□□□ -1.02
PRICKLE1-220ENST00000640840 SETD5Q9C0A6 1442 aa8.65□□□□□ -1.02
PRICKLE1-220ENST00000640840 NCBP3Q53F19 620 aaKnown RBP8.65□□□□□ -1.03
PRICKLE1-220ENST00000640840 ESF1Q9H501 851 aaKnown RBP8.65□□□□□ -1.03
PRICKLE1-220ENST00000640840 ITGAEP38570 1179 aa8.64□□□□□ -1.03
PRICKLE1-220ENST00000640840 NUP155O75694 1391 aa8.64□□□□□ -1.03
PRICKLE1-220ENST00000640840 IFT172Q9UG01 1749 aa8.64□□□□□ -1.03
PRICKLE1-220ENST00000640840 IQGAP1P46940 1657 aa8.63□□□□□ -1.03
PRICKLE1-220ENST00000640840 CENPBP07199 599 aaPredicted RBP8.63□□□□□ -1.03
PRICKLE1-220ENST00000640840 KIF1BO60333 1816 aa8.63□□□□□ -1.03
PRICKLE1-220ENST00000640840 RAB3GAP2Q9H2M9 1393 aa8.62□□□□□ -1.03
PRICKLE1-220ENST00000640840 ZFYVE9O95405 1425 aa8.62□□□□□ -1.03
PRICKLE1-220ENST00000640840 DIEXFQ68CQ4 756 aaKnown RBP8.62□□□□□ -1.03
PRICKLE1-220ENST00000640840 YTHDC1Q96MU7 727 aaKnown RBP8.62□□□□□ -1.03
PRICKLE1-220ENST00000640840 PHF23Q9BUL5 403 aaPredicted RBP8.62□□□□□ -1.03
PRICKLE1-220ENST00000640840 GRWD1Q9BQ67 446 aaKnown RBP eCLIP8.61□□□□□ -1.03
PRICKLE1-220ENST00000640840 STRCP1A6NGW2 1772 aa8.61□□□□□ -1.03
PRICKLE1-220ENST00000640840 PPLO60437 1756 aa8.61□□□□□ -1.03
PRICKLE1-220ENST00000640840 NRXN3Q9Y4C0 1643 aa8.6□□□□□ -1.03
PRICKLE1-220ENST00000640840 LTBP4Q8N2S1 1624 aa8.6□□□□□ -1.03
PRICKLE1-220ENST00000640840 SETD1AO15047 1707 aaKnown RBP8.6□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms