RNA–Protein interactions for RNA: ENST00000640648.1

NECAP1-227, Transcript of NECAP endocytosis associated 1, humanhuman

TSL 5

Gene NECAP1, Length 5,166 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECAP1-227ENST00000640648 MCM5P33992 734 aa10.27□□□□□ -0.77
NECAP1-227ENST00000640648 KTN1Q86UP2 1357 aaKnown RBP10.27□□□□□ -0.77
NECAP1-227ENST00000640648 FGD1P98174 961 aa10.26□□□□□ -0.77
NECAP1-227ENST00000640648 WASHC2CQ9Y4E1 1318 aa10.26□□□□□ -0.77
NECAP1-227ENST00000640648 ESPNB1AK53 854 aa10.26□□□□□ -0.77
NECAP1-227ENST00000640648 SLKQ9H2G2 1235 aaPredicted RBP10.26□□□□□ -0.77
NECAP1-227ENST00000640648 PRKRIP1Q9H875 184 aaPredicted RBP10.26□□□□□ -0.77
NECAP1-227ENST00000640648 CENPJQ9HC77 1338 aaPredicted RBP10.26□□□□□ -0.77
NECAP1-227ENST00000640648 DNAJC5BQ9UF47 199 aa10.25□□□□□ -0.77
NECAP1-227ENST00000640648 ZRSR1Q15695 479 aaKnown RBP10.25□□□□□ -0.77
NECAP1-227ENST00000640648 DYNC1I1O14576 645 aa10.25□□□□□ -0.77
NECAP1-227ENST00000640648 RBM28Q9NW13 759 aaKnown RBP10.25□□□□□ -0.77
NECAP1-227ENST00000640648 ARID3AQ99856 593 aa10.24□□□□□ -0.77
NECAP1-227ENST00000640648 WASHC2AQ641Q2 1341 aa10.24□□□□□ -0.77
NECAP1-227ENST00000640648 NUP155O75694 1391 aa10.24□□□□□ -0.77
NECAP1-227ENST00000640648 CREBRFQ8IUR6 639 aa10.24□□□□□ -0.77
NECAP1-227ENST00000640648 BCCIPQ9P287 314 aaKnown RBP eCLIP10.24□□□□□ -0.77
NECAP1-227ENST00000640648 ARGLU1Q9NWB6 273 aaPredicted RBP10.23□□□□□ -0.77
NECAP1-227ENST00000640648 ROCK2O75116 1388 aaKnown RBP10.23□□□□□ -0.77
NECAP1-227ENST00000640648 MSH5O43196 834 aa10.23□□□□□ -0.77
NECAP1-227ENST00000640648 DHX8Q14562 1220 aaKnown RBP10.23□□□□□ -0.77
NECAP1-227ENST00000640648 RALBP1Q15311 655 aa10.23□□□□□ -0.77
NECAP1-227ENST00000640648 DEF6Q9H4E7 631 aa10.23□□□□□ -0.77
NECAP1-227ENST00000640648 SSR1P43307 286 aaKnown RBP10.23□□□□□ -0.77
NECAP1-227ENST00000640648 PMFBP1Q8TBY8 1022 aa10.22□□□□□ -0.77
NECAP1-227ENST00000640648 SAFB2Q14151 953 aaKnown RBP eCLIP10.22□□□□□ -0.77
NECAP1-227ENST00000640648 SMARCA2P51531 1590 aa10.22□□□□□ -0.77
NECAP1-227ENST00000640648 PLIN1O60240 522 aa10.22□□□□□ -0.77
NECAP1-227ENST00000640648 AMER1Q5JTC6 1135 aaPredicted RBP10.22□□□□□ -0.77
NECAP1-227ENST00000640648 GZF1Q9H116 711 aaPredicted RBP10.22□□□□□ -0.77
NECAP1-227ENST00000640648 ZBTB7CA1YPR0 619 aa10.21□□□□□ -0.77
NECAP1-227ENST00000640648 RNF20Q5VTR2 975 aa10.21□□□□□ -0.77
NECAP1-227ENST00000640648 SLC4A3P48751 1232 aa10.21□□□□□ -0.78
NECAP1-227ENST00000640648 IPO4Q8TEX9 1081 aaKnown RBP10.21□□□□□ -0.78
NECAP1-227ENST00000640648 KIF16BQ96L93 1317 aa10.21□□□□□ -0.78
NECAP1-227ENST00000640648 KIAA1211Q6ZU35 1233 aa10.2□□□□□ -0.78
NECAP1-227ENST00000640648 MORC1Q86VD1 984 aa10.2□□□□□ -0.78
NECAP1-227ENST00000640648 ST20-MTHFSA0A0A6YYL1 179 aa10.2□□□□□ -0.78
NECAP1-227ENST00000640648 ZSCAN30Q86W11 494 aa10.2□□□□□ -0.78
NECAP1-227ENST00000640648 NLRP13Q86W25 1043 aa10.2□□□□□ -0.78
NECAP1-227ENST00000640648 EXOC6Q8TAG9 804 aa10.2□□□□□ -0.78
NECAP1-227ENST00000640648 ACBD3Q9H3P7 528 aa10.2□□□□□ -0.78
NECAP1-227ENST00000640648 CCDC146Q8IYE0 955 aa10.2□□□□□ -0.78
NECAP1-227ENST00000640648 NAP1L2Q9ULW6 460 aaPredicted RBP10.2□□□□□ -0.78
NECAP1-227ENST00000640648 SMARCA4P51532 1647 aa10.2□□□□□ -0.78
NECAP1-227ENST00000640648 C14orf37Q86TY3 774 aa10.2□□□□□ -0.78
NECAP1-227ENST00000640648 FAM193AP78312 1265 aa10.19□□□□□ -0.78
NECAP1-227ENST00000640648 POGKQ9P215 609 aa10.19□□□□□ -0.78
NECAP1-227ENST00000640648 EIF3AQ14152 1382 aaKnown RBP10.18□□□□□ -0.78
NECAP1-227ENST00000640648 MNS1Q8NEH6 495 aa10.18□□□□□ -0.78
NECAP1-227ENST00000640648 SASS6Q6UVJ0 657 aa10.18□□□□□ -0.78
NECAP1-227ENST00000640648 CLUAP1Q96AJ1 413 aa10.18□□□□□ -0.78
NECAP1-227ENST00000640648 FAM107BQ9H098 131 aa10.18□□□□□ -0.78
NECAP1-227ENST00000640648 CCDC18Q5T9S5 1454 aa10.18□□□□□ -0.78
NECAP1-227ENST00000640648 PLCB2Q00722 1185 aa10.18□□□□□ -0.78
NECAP1-227ENST00000640648 R3HCC1Q9Y3T6 440 aaKnown RBP10.18□□□□□ -0.78
NECAP1-227ENST00000640648 ATAD2BQ9ULI0 1458 aa10.17□□□□□ -0.78
NECAP1-227ENST00000640648 ZNF622Q969S3 477 aaKnown RBP eCLIP10.17□□□□□ -0.78
NECAP1-227ENST00000640648 AK7Q96M32 723 aa10.17□□□□□ -0.78
NECAP1-227ENST00000640648 KIF21BO75037 1637 aa10.16□□□□□ -0.78
NECAP1-227ENST00000640648 GOLGA2Q08379 1002 aa10.16□□□□□ -0.78
NECAP1-227ENST00000640648 HS1BP3Q53T59 392 aa10.16□□□□□ -0.78
NECAP1-227ENST00000640648 NGEFQ8N5V2 710 aa10.16□□□□□ -0.78
NECAP1-227ENST00000640648 TIGD1Q96MW7 591 aa10.16□□□□□ -0.78
NECAP1-227ENST00000640648 RWDD1Q9H446 243 aaPredicted RBP10.16□□□□□ -0.78
NECAP1-227ENST00000640648 HNRNPMP52272 730 aaKnown RBP eCLIP10.16□□□□□ -0.78
NECAP1-227ENST00000640648 UTP14CQ5TAP6 766 aaKnown RBP10.16□□□□□ -0.78
NECAP1-227ENST00000640648 ANKRD30AQ9BXX3 1397 aa10.16□□□□□ -0.78
NECAP1-227ENST00000640648 TPM4P67936 248 aa10.16□□□□□ -0.78
NECAP1-227ENST00000640648 NBPF1Q3BBV0 1214 aa10.16□□□□□ -0.78
NECAP1-227ENST00000640648 GOLGA6L4A6NEF3 574 aa10.15□□□□□ -0.78
NECAP1-227ENST00000640648 PES1O00541 588 aaKnown RBP10.15□□□□□ -0.78
NECAP1-227ENST00000640648 U2AF1L5P0DN76 240 aaPredicted RBP10.15□□□□□ -0.78
NECAP1-227ENST00000640648 MCCP23508 829 aa10.15□□□□□ -0.78
NECAP1-227ENST00000640648 NASPP49321 788 aaPredicted RBP10.15□□□□□ -0.78
NECAP1-227ENST00000640648 U2AF1Q01081 240 aaKnown RBP eCLIP10.15□□□□□ -0.78
NECAP1-227ENST00000640648 RDXP35241 583 aaKnown RBP10.15□□□□□ -0.78
NECAP1-227ENST00000640648 PRIMPOLQ96LW4 560 aa10.15□□□□□ -0.78
NECAP1-227ENST00000640648 CIZ1Q9ULV3 898 aaPredicted RBP10.15□□□□□ -0.78
NECAP1-227ENST00000640648 PATL2C9JE40 543 aaKnown RBP10.15□□□□□ -0.79
NECAP1-227ENST00000640648 APBB1O00213 710 aa10.15□□□□□ -0.79
NECAP1-227ENST00000640648 RRP1P56182 461 aaKnown RBP10.15□□□□□ -0.79
NECAP1-227ENST00000640648 SRPK2P78362 688 aaKnown RBP10.15□□□□□ -0.79
NECAP1-227ENST00000640648 DRC7Q8IY82 874 aa10.14□□□□□ -0.79
NECAP1-227ENST00000640648 UNC13AQ9UPW8 1703 aa10.14□□□□□ -0.79
NECAP1-227ENST00000640648 MYBBP1AQ9BQG0 1328 aaKnown RBP10.14□□□□□ -0.79
NECAP1-227ENST00000640648 UQCRHLA0A096LP55 91 aa10.14□□□□□ -0.79
NECAP1-227ENST00000640648 UQCRHP07919 91 aa10.14□□□□□ -0.79
NECAP1-227ENST00000640648 SOX12O15370 315 aa10.13□□□□□ -0.79
NECAP1-227ENST00000640648 NUCB2P80303 420 aa10.13□□□□□ -0.79
NECAP1-227ENST00000640648 CRBNQ96SW2 442 aa10.13□□□□□ -0.79
NECAP1-227ENST00000640648 BACH2Q9BYV9 841 aa10.13□□□□□ -0.79
NECAP1-227ENST00000640648 GRPEL1Q9HAV7 217 aa10.13□□□□□ -0.79
NECAP1-227ENST00000640648 BICRAQ9NZM4 1560 aa10.13□□□□□ -0.79
NECAP1-227ENST00000640648 MFAP1P55081 439 aaKnown RBP10.13□□□□□ -0.79
NECAP1-227ENST00000640648 STK26Q9P289 416 aa10.13□□□□□ -0.79
NECAP1-227ENST00000640648 USP47Q96K76 1375 aa10.13□□□□□ -0.79
NECAP1-227ENST00000640648 ITPRIPQ8IWB1 547 aa10.13□□□□□ -0.79
NECAP1-227ENST00000640648 PANK3Q9H999 370 aa10.13□□□□□ -0.79
NECAP1-227ENST00000640648 KIF15Q9NS87 1388 aa10.13□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 10.4 ms