RNA–Protein interactions for RNA: ENST00000640458.1

VPS72-207, Transcript of vacuolar protein sorting 72 homolog, humanhuman

TSL 5 BASIC

Gene VPS72, Length 689 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS72-207ENST00000640458 SHANK2Q9UPX8 1470 aa28.84■■■□□ 2.21
VPS72-207ENST00000640458 CPS1P31327 1500 aa28.84■■■□□ 2.21
VPS72-207ENST00000640458 ZNF644Q9H582 1327 aaPredicted RBP28.83■■■□□ 2.21
VPS72-207ENST00000640458 PHF23Q9BUL5 403 aaPredicted RBP28.82■■■□□ 2.2
VPS72-207ENST00000640458 TNRQ92752 1358 aa28.82■■■□□ 2.2
VPS72-207ENST00000640458 MTUS2Q5JR59 1369 aa28.81■■■□□ 2.2
VPS72-207ENST00000640458 POLR1AO95602 1720 aaPredicted RBP28.8■■■□□ 2.2
VPS72-207ENST00000640458 NEURL4Q96JN8 1562 aa28.79■■■□□ 2.2
VPS72-207ENST00000640458 ANKLE2Q86XL3 938 aa28.78■■■□□ 2.2
VPS72-207ENST00000640458 DHX29Q7Z478 1369 aaKnown RBP28.77■■■□□ 2.2
VPS72-207ENST00000640458 KIF3BO15066 747 aa28.77■■■□□ 2.2
VPS72-207ENST00000640458 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP28.75■■■□□ 2.19
VPS72-207ENST00000640458 SENP3Q9H4L4 574 aaPredicted RBP28.74■■■□□ 2.19
VPS72-207ENST00000640458 MBD5Q9P267 1494 aa28.73■■■□□ 2.19
VPS72-207ENST00000640458 RTEL1-TNFRSF6BF6WH68 1400 aa28.73■■■□□ 2.19
VPS72-207ENST00000640458 THEMISQ8N1K5 641 aaPredicted RBP28.73■■■□□ 2.19
VPS72-207ENST00000640458 EHBP1L1Q8N3D4 1523 aa28.72■■■□□ 2.19
VPS72-207ENST00000640458 WASHC2CQ9Y4E1 1318 aa28.71■■■□□ 2.19
VPS72-207ENST00000640458 PZPP20742 1482 aa28.71■■■□□ 2.19
VPS72-207ENST00000640458 VWDEQ8N2E2 1590 aa28.7■■■□□ 2.18
VPS72-207ENST00000640458 TIAM1Q13009 1591 aa28.68■■■□□ 2.18
VPS72-207ENST00000640458 KDM5DQ9BY66 1539 aa28.68■■■□□ 2.18
VPS72-207ENST00000640458 NPHP4O75161 1426 aaPredicted RBP28.68■■■□□ 2.18
VPS72-207ENST00000640458 MIA2Q96PC5 1412 aa28.66■■■□□ 2.18
VPS72-207ENST00000640458 ALKQ9UM73 1620 aa28.65■■■□□ 2.18
VPS72-207ENST00000640458 MAP3K1Q13233 1512 aa28.64■■■□□ 2.18
VPS72-207ENST00000640458 UGGT1Q9NYU2 1555 aa28.64■■■□□ 2.18
VPS72-207ENST00000640458 FAM135AQ9P2D6 1515 aa28.63■■■□□ 2.17
VPS72-207ENST00000640458 MED14O60244 1454 aa28.62■■■□□ 2.17
VPS72-207ENST00000640458 NLRP1Q9C000 1473 aa28.62■■■□□ 2.17
VPS72-207ENST00000640458 LRRC9Q6ZRR7 1453 aa28.59■■■□□ 2.17
VPS72-207ENST00000640458 DEPDC5O75140 1603 aa28.59■■■□□ 2.17
VPS72-207ENST00000640458 CCDC141Q6ZP82 1450 aa28.58■■■□□ 2.17
VPS72-207ENST00000640458 NCOA2Q15596 1464 aa28.57■■■□□ 2.16
VPS72-207ENST00000640458 IQGAP1P46940 1657 aa28.55■■■□□ 2.16
VPS72-207ENST00000640458 LRRC7Q96NW7 1537 aa28.55■■■□□ 2.16
VPS72-207ENST00000640458 KANK4Q5T7N3 995 aaPredicted RBP28.55■■■□□ 2.16
VPS72-207ENST00000640458 RSPH4AQ5TD94 716 aa28.53■■■□□ 2.16
VPS72-207ENST00000640458 STRCP1A6NGW2 1772 aa28.52■■■□□ 2.16
VPS72-207ENST00000640458 APLP2Q06481 763 aa28.52■■■□□ 2.16
VPS72-207ENST00000640458 CAMSAP2Q08AD1 1489 aa28.51■■■□□ 2.15
VPS72-207ENST00000640458 RNF17Q9BXT8 1623 aaKnown RBP28.48■■■□□ 2.15
VPS72-207ENST00000640458 TSPY4P0CV99 314 aa28.48■■■□□ 2.15
VPS72-207ENST00000640458 TSPY10P0CW01 314 aa28.48■■■□□ 2.15
VPS72-207ENST00000640458 RGS17Q9UGC6 210 aaPredicted RBP28.46■■■□□ 2.15
VPS72-207ENST00000640458 SYNMO15061 1565 aa28.45■■■□□ 2.14
VPS72-207ENST00000640458 ABCC3O15438 1527 aa28.41■■■□□ 2.14
VPS72-207ENST00000640458 ERVK-7P63135 1459 aa28.4■■■□□ 2.14
VPS72-207ENST00000640458 ARHGEF5Q12774 1597 aa28.37■■■□□ 2.13
VPS72-207ENST00000640458 ZC3H13Q5T200 1668 aaKnown RBP28.36■■■□□ 2.13
VPS72-207ENST00000640458 TXNDC2Q86VQ3 553 aa28.36■■■□□ 2.13
VPS72-207ENST00000640458 SCAF11Q99590 1463 aaKnown RBP28.35■■■□□ 2.13
VPS72-207ENST00000640458 LTKP29376 864 aa28.35■■■□□ 2.13
VPS72-207ENST00000640458 CFAP65Q6ZU64 1925 aaKnown RBP28.34■■■□□ 2.13
VPS72-207ENST00000640458 MYOM3Q5VTT5 1437 aa28.33■■■□□ 2.13
VPS72-207ENST00000640458 UBR1Q8IWV7 1749 aa28.32■■■□□ 2.12
VPS72-207ENST00000640458 POTEAQ6S8J7 498 aa28.29■■■□□ 2.12
VPS72-207ENST00000640458 EID1Q9Y6B2 187 aa28.28■■■□□ 2.12
VPS72-207ENST00000640458 XIRP1Q702N8 1843 aaKnown RBP28.27■■■□□ 2.12
VPS72-207ENST00000640458 CEP152O94986 1710 aa28.26■■■□□ 2.12
VPS72-207ENST00000640458 ARHGAP23Q9P227 1491 aa28.26■■■□□ 2.11
VPS72-207ENST00000640458 FAM135BQ49AJ0 1406 aa28.26■■■□□ 2.11
VPS72-207ENST00000640458 MROH1Q8NDA8 1641 aa28.25■■■□□ 2.11
VPS72-207ENST00000640458 EIF2AK4Q9P2K8 1649 aaKnown RBP28.25■■■□□ 2.11
VPS72-207ENST00000640458 SLIT1O75093 1534 aa28.24■■■□□ 2.11
VPS72-207ENST00000640458 MAST1Q9Y2H9 1570 aa28.24■■■□□ 2.11
VPS72-207ENST00000640458 TMEM94Q12767 1356 aa28.2■■■□□ 2.1
VPS72-207ENST00000640458 STAG3Q9UJ98 1225 aa28.19■■■□□ 2.1
VPS72-207ENST00000640458 TMEM2Q9UHN6 1383 aa28.16■■■□□ 2.1
VPS72-207ENST00000640458 RBM33Q96EV2 1170 aaKnown RBP28.16■■■□□ 2.1
VPS72-207ENST00000640458 PROSER2Q86WR7 435 aaPredicted RBP28.15■■■□□ 2.1
VPS72-207ENST00000640458 FGD6Q6ZV73 1430 aa28.15■■■□□ 2.1
VPS72-207ENST00000640458 DUOX2Q9NRD8 1548 aa28.14■■■□□ 2.1
VPS72-207ENST00000640458 KCNA6P17658 529 aa28.14■■■□□ 2.1
VPS72-207ENST00000640458 GRWD1Q9BQ67 446 aaKnown RBP eCLIP28.14■■■□□ 2.16e-7■■■■□ 25.4
VPS72-207ENST00000640458 ARHGAP31Q2M1Z3 1444 aa28.14■■■□□ 2.1
VPS72-207ENST00000640458 PIK3C2BO00750 1634 aa28.12■■■□□ 2.09
VPS72-207ENST00000640458 SLC26A8Q96RN1 970 aa28.12■■■□□ 2.09
VPS72-207ENST00000640458 ROBO1Q9Y6N7 1651 aa28.12■■■□□ 2.09
VPS72-207ENST00000640458 PTPN23Q9H3S7 1636 aa28.11■■■□□ 2.09
VPS72-207ENST00000640458 RRP7BPQ9NSQ0 103 aa28.08■■■□□ 2.09
VPS72-207ENST00000640458 KIF15Q9NS87 1388 aa28.08■■■□□ 2.09
VPS72-207ENST00000640458 PRDM15P57071 1507 aaPredicted RBP28.08■■■□□ 2.08
VPS72-207ENST00000640458 ABCC5O15440 1437 aa28.05■■■□□ 2.08
VPS72-207ENST00000640458 IDI1Q13907 227 aa28.05■■■□□ 2.08
VPS72-207ENST00000640458 EFCAB6Q5THR3 1501 aa28.04■■■□□ 2.08
VPS72-207ENST00000640458 SETD1AO15047 1707 aaKnown RBP28.04■■■□□ 2.08
VPS72-207ENST00000640458 BCANQ96GW7 911 aa28.03■■■□□ 2.08
VPS72-207ENST00000640458 ERBINQ96RT1 1412 aa28.02■■■□□ 2.08
VPS72-207ENST00000640458 KANK1Q14678 1352 aa28.02■■■□□ 2.08
VPS72-207ENST00000640458 SLAIN2Q9P270 581 aa28.01■■■□□ 2.07
VPS72-207ENST00000640458 MSH6P52701 1360 aa28■■■□□ 2.07
VPS72-207ENST00000640458 TET3O43151 1660 aa28■■■□□ 2.07
VPS72-207ENST00000640458 DAPK1P53355 1430 aa28■■■□□ 2.07
VPS72-207ENST00000640458 JCADQ9P266 1359 aa27.99■■■□□ 2.07
VPS72-207ENST00000640458 PPARGC1BQ86YN6 1023 aaKnown RBP27.97■■■□□ 2.07
VPS72-207ENST00000640458 PHLPP1O60346 1717 aa27.97■■■□□ 2.07
VPS72-207ENST00000640458 NKTRP30414 1462 aaKnown RBP27.96■■■□□ 2.07
VPS72-207ENST00000640458 FAM50AQ14320 339 aaKnown RBP27.96■■■□□ 2.07
VPS72-207ENST00000640458 KDM5AP29375 1690 aaKnown RBP27.96■■■□□ 2.07
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms