RNA–Protein interactions for RNA: ENST00000640408.1

RTTN-218, Transcript of rotatin, humanhuman

TSL 5

Gene RTTN, Length 5,589 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTTN-218ENST00000640408 DMRT2Q9Y5R5 561 aa7.83□□□□□ -1.16
RTTN-218ENST00000640408 ERBINQ96RT1 1412 aa7.82□□□□□ -1.16
RTTN-218ENST00000640408 MPHOSPH9Q99550 1183 aa7.82□□□□□ -1.16
RTTN-218ENST00000640408 DUOX2Q9NRD8 1548 aa7.82□□□□□ -1.16
RTTN-218ENST00000640408 ZFYVE16Q7Z3T8 1539 aa7.82□□□□□ -1.16
RTTN-218ENST00000640408 SYCP2Q9BX26 1530 aa7.82□□□□□ -1.16
RTTN-218ENST00000640408 ARHGEF5Q12774 1597 aa7.82□□□□□ -1.16
RTTN-218ENST00000640408 ZNF316A6NFI3 1004 aaPredicted RBP7.81□□□□□ -1.16
RTTN-218ENST00000640408 VGFO15240 615 aaPredicted RBP7.81□□□□□ -1.16
RTTN-218ENST00000640408 RAB3GAP2Q9H2M9 1393 aa7.81□□□□□ -1.16
RTTN-218ENST00000640408 ABCC1P33527 1531 aa7.8□□□□□ -1.16
RTTN-218ENST00000640408 NEUROD1Q13562 356 aa7.8□□□□□ -1.16
RTTN-218ENST00000640408 PREX2Q70Z35 1606 aa7.79□□□□□ -1.16
RTTN-218ENST00000640408 ATP7AQ04656 1500 aa7.79□□□□□ -1.16
RTTN-218ENST00000640408 MBD5Q9P267 1494 aa7.79□□□□□ -1.16
RTTN-218ENST00000640408 ADGRL2O95490 1459 aa7.79□□□□□ -1.16
RTTN-218ENST00000640408 CCDC144AA2RUR9 1427 aa7.78□□□□□ -1.16
RTTN-218ENST00000640408 RPGRIP1LQ68CZ1 1315 aa7.78□□□□□ -1.16
RTTN-218ENST00000640408 TTC37Q6PGP7 1564 aa7.78□□□□□ -1.16
RTTN-218ENST00000640408 NAIPQ13075 1403 aa7.77□□□□□ -1.17
RTTN-218ENST00000640408 ANKLE2Q86XL3 938 aa7.77□□□□□ -1.17
RTTN-218ENST00000640408 FAM135AQ9P2D6 1515 aa7.76□□□□□ -1.17
RTTN-218ENST00000640408 HECW2Q9P2P5 1572 aa7.75□□□□□ -1.17
RTTN-218ENST00000640408 TNRQ92752 1358 aa7.75□□□□□ -1.17
RTTN-218ENST00000640408 RGL3Q3MIN7 710 aa7.75□□□□□ -1.17
RTTN-218ENST00000640408 CDCA8Q53HL2 280 aa7.75□□□□□ -1.17
RTTN-218ENST00000640408 AGLP35573 1532 aa7.75□□□□□ -1.17
RTTN-218ENST00000640408 DNMT1P26358 1616 aaKnown RBP7.74□□□□□ -1.17
RTTN-218ENST00000640408 ANKRD30BQ9BXX2 1392 aa7.74□□□□□ -1.17
RTTN-218ENST00000640408 SAMD9LQ8IVG5 1584 aa7.74□□□□□ -1.17
RTTN-218ENST00000640408 C14orf37Q86TY3 774 aa7.73□□□□□ -1.17
RTTN-218ENST00000640408 TSPOAP1O95153 1857 aa7.73□□□□□ -1.17
RTTN-218ENST00000640408 YEATS2Q9ULM3 1422 aa7.73□□□□□ -1.17
RTTN-218ENST00000640408 ZMYM3Q14202 1370 aa7.73□□□□□ -1.17
RTTN-218ENST00000640408 MAP3K4Q9Y6R4 1608 aa7.73□□□□□ -1.17
RTTN-218ENST00000640408 ZMYM4Q5VZL5 1548 aa7.72□□□□□ -1.17
RTTN-218ENST00000640408 MAST1Q9Y2H9 1570 aa7.72□□□□□ -1.17
RTTN-218ENST00000640408 TXNDC2Q86VQ3 553 aa7.72□□□□□ -1.17
RTTN-218ENST00000640408 KDM2AQ9Y2K7 1162 aa7.71□□□□□ -1.17
RTTN-218ENST00000640408 UHRF1BP1Q6BDS2 1440 aa7.71□□□□□ -1.18
RTTN-218ENST00000640408 ANP32AP39687 249 aaKnown RBP7.71□□□□□ -1.18
RTTN-218ENST00000640408 RPRD2Q5VT52 1461 aaKnown RBP7.71□□□□□ -1.18
RTTN-218ENST00000640408 CDC42BPAQ5VT25 1732 aa7.7□□□□□ -1.18
RTTN-218ENST00000640408 DCAF11Q8TEB1 546 aa7.7□□□□□ -1.18
RTTN-218ENST00000640408 POGKQ9P215 609 aa7.7□□□□□ -1.18
RTTN-218ENST00000640408 KDM5CP41229 1560 aa7.7□□□□□ -1.18
RTTN-218ENST00000640408 ARHGAP31Q2M1Z3 1444 aa7.7□□□□□ -1.18
RTTN-218ENST00000640408 ARHGEF40Q8TER5 1519 aa7.69□□□□□ -1.18
RTTN-218ENST00000640408 ARHGEF12Q9NZN5 1544 aa7.69□□□□□ -1.18
RTTN-218ENST00000640408 PLXNC1O60486 1568 aa7.69□□□□□ -1.18
RTTN-218ENST00000640408 NPATQ14207 1427 aa7.68□□□□□ -1.18
RTTN-218ENST00000640408 IDI1Q13907 227 aa7.68□□□□□ -1.18
RTTN-218ENST00000640408 EIF3AQ14152 1382 aaKnown RBP7.67□□□□□ -1.18
RTTN-218ENST00000640408 COL17A1Q9UMD9 1497 aaPredicted RBP7.67□□□□□ -1.18
RTTN-218ENST00000640408 NLRP1Q9C000 1473 aa7.67□□□□□ -1.18
RTTN-218ENST00000640408 EIF4G2P78344 907 aaKnown RBP eCLIP7.67□□□□□ -1.18
RTTN-218ENST00000640408 CEBPAP49715 358 aaPredicted RBP7.67□□□□□ -1.18
RTTN-218ENST00000640408 REREQ9P2R6 1566 aa7.66□□□□□ -1.18
RTTN-218ENST00000640408 DHX57Q6P158 1386 aaKnown RBP7.66□□□□□ -1.18
RTTN-218ENST00000640408 CDC42BPBQ9Y5S2 1711 aa7.66□□□□□ -1.18
RTTN-218ENST00000640408 PTPRKQ15262 1439 aa7.66□□□□□ -1.18
RTTN-218ENST00000640408 PRKCSHP14314 528 aaPredicted RBP7.66□□□□□ -1.18
RTTN-218ENST00000640408 ADGBQ8N7X0 1667 aa7.66□□□□□ -1.18
RTTN-218ENST00000640408 KDM5DQ9BY66 1539 aa7.66□□□□□ -1.18
RTTN-218ENST00000640408 CARD11Q9BXL7 1154 aa7.65□□□□□ -1.18
RTTN-218ENST00000640408 FBXO31Q5XUX0 539 aaPredicted RBP7.65□□□□□ -1.19
RTTN-218ENST00000640408 SETD1BQ9UPS6 1966 aaKnown RBP7.64□□□□□ -1.19
RTTN-218ENST00000640408 DIP2CQ9Y2E4 1556 aa7.64□□□□□ -1.19
RTTN-218ENST00000640408 EIF2AK4Q9P2K8 1649 aaKnown RBP7.64□□□□□ -1.19
RTTN-218ENST00000640408 PZPP20742 1482 aa7.63□□□□□ -1.19
RTTN-218ENST00000640408 INO80Q9ULG1 1556 aaPredicted RBP7.63□□□□□ -1.19
RTTN-218ENST00000640408 FOXD1Q16676 465 aa7.63□□□□□ -1.19
RTTN-218ENST00000640408 L3MBTL2Q969R5 705 aa7.63□□□□□ -1.19
RTTN-218ENST00000640408 TBX22Q9Y458 520 aa7.63□□□□□ -1.19
RTTN-218ENST00000640408 POLR3GLQ9BT43 218 aa7.62□□□□□ -1.19
RTTN-218ENST00000640408 SIN3AQ96ST3 1273 aa7.62□□□□□ -1.19
RTTN-218ENST00000640408 PROSER2Q86WR7 435 aaPredicted RBP7.62□□□□□ -1.19
RTTN-218ENST00000640408 KIF13AQ9H1H9 1805 aa7.61□□□□□ -1.19
RTTN-218ENST00000640408 TMF1P82094 1093 aa7.61□□□□□ -1.19
RTTN-218ENST00000640408 LMTK2Q8IWU2 1503 aa7.61□□□□□ -1.19
RTTN-218ENST00000640408 ATF3P18847 181 aa7.6□□□□□ -1.19
RTTN-218ENST00000640408 ERICH6BQ5W0A0 696 aa7.6□□□□□ -1.19
RTTN-218ENST00000640408 ABCC3O15438 1527 aa7.59□□□□□ -1.19
RTTN-218ENST00000640408 ROCK2O75116 1388 aaKnown RBP7.59□□□□□ -1.19
RTTN-218ENST00000640408 TMEM2Q9UHN6 1383 aa7.59□□□□□ -1.19
RTTN-218ENST00000640408 A2ML1A8K2U0 1454 aa7.59□□□□□ -1.19
RTTN-218ENST00000640408 PTPRMP28827 1452 aa7.59□□□□□ -1.19
RTTN-218ENST00000640408 ERVK-7P63135 1459 aa7.59□□□□□ -1.19
RTTN-218ENST00000640408 RIMS2Q9UQ26 1411 aa7.59□□□□□ -1.19
RTTN-218ENST00000640408 TNNT2P45379 298 aaPredicted RBP7.58□□□□□ -1.2
RTTN-218ENST00000640408 KIDINS220Q9ULH0 1771 aa7.58□□□□□ -1.2
RTTN-218ENST00000640408 LRRIQ1Q96JM4 1722 aa7.58□□□□□ -1.2
RTTN-218ENST00000640408 PIK3R4Q99570 1358 aa7.58□□□□□ -1.2
RTTN-218ENST00000640408 STK26Q9P289 416 aa7.58□□□□□ -1.2
RTTN-218ENST00000640408 RICTORQ6R327 1708 aa7.58□□□□□ -1.2
RTTN-218ENST00000640408 PRDM15P57071 1507 aaPredicted RBP7.58□□□□□ -1.2
RTTN-218ENST00000640408 NOS1P29475 1434 aa7.58□□□□□ -1.2
RTTN-218ENST00000640408 NBR1Q14596 966 aa7.57□□□□□ -1.2
RTTN-218ENST00000640408 CADPS2Q86UW7 1296 aa7.57□□□□□ -1.2
RTTN-218ENST00000640408 PTPRTO14522 1441 aa7.57□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms