RNA–Protein interactions for RNA: ENST00000639599.1

TARDBP-231, Transcript of TAR DNA binding protein, humanhuman

TSL 5

Gene TARDBP, Length 1,283 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-231ENST00000639599 TNRQ92752 1358 aa23.1■■□□□ 1.29
TARDBP-231ENST00000639599 FAM135AQ9P2D6 1515 aa23.08■■□□□ 1.29
TARDBP-231ENST00000639599 ARHGEF5Q12774 1597 aa23.08■■□□□ 1.29
TARDBP-231ENST00000639599 ZNF142P52746 1687 aaPredicted RBP23.07■■□□□ 1.28
TARDBP-231ENST00000639599 A2ML1A8K2U0 1454 aa23.07■■□□□ 1.28
TARDBP-231ENST00000639599 IQSEC2Q5JU85 1478 aa23.05■■□□□ 1.28
TARDBP-231ENST00000639599 ZNF335Q9H4Z2 1342 aaPredicted RBP23.05■■□□□ 1.28
TARDBP-231ENST00000639599 PZPP20742 1482 aa23.05■■□□□ 1.28
TARDBP-231ENST00000639599 FBXO31Q5XUX0 539 aaPredicted RBP23.04■■□□□ 1.28
TARDBP-231ENST00000639599 MAP3K1Q13233 1512 aa23.03■■□□□ 1.28
TARDBP-231ENST00000639599 MYOM3Q5VTT5 1437 aa23.03■■□□□ 1.28
TARDBP-231ENST00000639599 MIA2Q96PC5 1412 aa23.03■■□□□ 1.28
TARDBP-231ENST00000639599 KANK4Q5T7N3 995 aaPredicted RBP23.03■■□□□ 1.28
TARDBP-231ENST00000639599 LTBP4Q8N2S1 1624 aa23.03■■□□□ 1.28
TARDBP-231ENST00000639599 TCOF1Q13428 1488 aaKnown RBP23.02■■□□□ 1.28
TARDBP-231ENST00000639599 THEMISQ8N1K5 641 aaPredicted RBP22.99■■□□□ 1.27
TARDBP-231ENST00000639599 DISP3Q9P2K9 1392 aa22.99■■□□□ 1.27
TARDBP-231ENST00000639599 UBAP1LF5GYI3 381 aa22.98■■□□□ 1.27
TARDBP-231ENST00000639599 ANKLE2Q86XL3 938 aa22.97■■□□□ 1.27
TARDBP-231ENST00000639599 DNMT1P26358 1616 aaKnown RBP22.97■■□□□ 1.27
TARDBP-231ENST00000639599 NLRP1Q9C000 1473 aa22.96■■□□□ 1.27
TARDBP-231ENST00000639599 MAST1Q9Y2H9 1570 aa22.96■■□□□ 1.27
TARDBP-231ENST00000639599 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP22.93■■□□□ 1.261e-6■■■□□ 15.4
TARDBP-231ENST00000639599 UGGT1Q9NYU2 1555 aa22.91■■□□□ 1.26
TARDBP-231ENST00000639599 SCAF1Q9H7N4 1312 aaKnown RBP22.9■■□□□ 1.26
TARDBP-231ENST00000639599 DUOX2Q9NRD8 1548 aa22.9■■□□□ 1.26
TARDBP-231ENST00000639599 EIF2AK4Q9P2K8 1649 aaKnown RBP22.9■■□□□ 1.26
TARDBP-231ENST00000639599 KIF15Q9NS87 1388 aa22.89■■□□□ 1.26
TARDBP-231ENST00000639599 ABCC3O15438 1527 aa22.89■■□□□ 1.26
TARDBP-231ENST00000639599 RNF17Q9BXT8 1623 aaKnown RBP22.89■■□□□ 1.25
TARDBP-231ENST00000639599 ZC3H13Q5T200 1668 aaKnown RBP22.88■■□□□ 1.25
TARDBP-231ENST00000639599 RRP7BPQ9NSQ0 103 aa22.88■■□□□ 1.25
TARDBP-231ENST00000639599 SHANK2Q9UPX8 1470 aa22.85■■□□□ 1.25
TARDBP-231ENST00000639599 NPHP4O75161 1426 aaPredicted RBP22.85■■□□□ 1.25
TARDBP-231ENST00000639599 GRWD1Q9BQ67 446 aaKnown RBP eCLIP22.85■■□□□ 1.252e-9■■□□□ 13.4
TARDBP-231ENST00000639599 KANK1Q14678 1352 aa22.85■■□□□ 1.25
TARDBP-231ENST00000639599 ERBINQ96RT1 1412 aa22.84■■□□□ 1.25
TARDBP-231ENST00000639599 CPS1P31327 1500 aa22.84■■□□□ 1.25
TARDBP-231ENST00000639599 ERVK-7P63135 1459 aa22.84■■□□□ 1.25
TARDBP-231ENST00000639599 POLR1AO95602 1720 aaPredicted RBP22.83■■□□□ 1.25
TARDBP-231ENST00000639599 TOM1O60784 492 aa22.83■■□□□ 1.25
TARDBP-231ENST00000639599 ABCC5O15440 1437 aa22.82■■□□□ 1.24
TARDBP-231ENST00000639599 PTPN23Q9H3S7 1636 aa22.82■■□□□ 1.24
TARDBP-231ENST00000639599 SPATA31D1Q6ZQQ2 1576 aa22.82■■□□□ 1.24
TARDBP-231ENST00000639599 DAPK1P53355 1430 aa22.82■■□□□ 1.24
TARDBP-231ENST00000639599 FGD6Q6ZV73 1430 aa22.82■■□□□ 1.24
TARDBP-231ENST00000639599 PIP4K2BP78356 416 aa22.81■■□□□ 1.24
TARDBP-231ENST00000639599 NEURL4Q96JN8 1562 aa22.8■■□□□ 1.24
TARDBP-231ENST00000639599 ANKRD30AQ9BXX3 1397 aa22.8■■□□□ 1.24
TARDBP-231ENST00000639599 STAG3Q9UJ98 1225 aa22.8■■□□□ 1.24
TARDBP-231ENST00000639599 CHIC2Q9UKJ5 165 aa22.79■■□□□ 1.24
TARDBP-231ENST00000639599 FAM50AQ14320 339 aaKnown RBP22.76■■□□□ 1.23
TARDBP-231ENST00000639599 MED14O60244 1454 aa22.76■■□□□ 1.23
TARDBP-231ENST00000639599 DEPDC5O75140 1603 aa22.75■■□□□ 1.23
TARDBP-231ENST00000639599 MROH1Q8NDA8 1641 aa22.75■■□□□ 1.23
TARDBP-231ENST00000639599 EID1Q9Y6B2 187 aa22.75■■□□□ 1.23
TARDBP-231ENST00000639599 PRDM15P57071 1507 aaPredicted RBP22.75■■□□□ 1.23
TARDBP-231ENST00000639599 CEP152O94986 1710 aa22.74■■□□□ 1.23
TARDBP-231ENST00000639599 CROCC2H7BZ55 1655 aa22.74■■□□□ 1.23
TARDBP-231ENST00000639599 ARHGAP31Q2M1Z3 1444 aa22.74■■□□□ 1.23
TARDBP-231ENST00000639599 IQGAP1P46940 1657 aa22.71■■□□□ 1.23
TARDBP-231ENST00000639599 ILDR2Q71H61 639 aa22.71■■□□□ 1.23
TARDBP-231ENST00000639599 TXNDC2Q86VQ3 553 aa22.71■■□□□ 1.23
TARDBP-231ENST00000639599 SCAF11Q99590 1463 aaKnown RBP22.7■■□□□ 1.22
TARDBP-231ENST00000639599 VWDEQ8N2E2 1590 aa22.69■■□□□ 1.22
TARDBP-231ENST00000639599 HSPA1LP34931 641 aa22.67■■□□□ 1.22
TARDBP-231ENST00000639599 SOCS7O14512 581 aa22.66■■□□□ 1.22
TARDBP-231ENST00000639599 UBR1Q8IWV7 1749 aa22.63■■□□□ 1.21
TARDBP-231ENST00000639599 LTKP29376 864 aa22.62■■□□□ 1.21
TARDBP-231ENST00000639599 BCANQ96GW7 911 aa22.61■■□□□ 1.21
TARDBP-231ENST00000639599 SENP3Q9H4L4 574 aaPredicted RBP22.61■■□□□ 1.21
TARDBP-231ENST00000639599 SLIT1O75093 1534 aa22.61■■□□□ 1.21
TARDBP-231ENST00000639599 LMTK2Q8IWU2 1503 aa22.61■■□□□ 1.21
TARDBP-231ENST00000639599 TMEM2Q9UHN6 1383 aa22.61■■□□□ 1.21
TARDBP-231ENST00000639599 ARHGAP23Q9P227 1491 aa22.6■■□□□ 1.21
TARDBP-231ENST00000639599 SYNMO15061 1565 aa22.6■■□□□ 1.21
TARDBP-231ENST00000639599 ADGRL2O95490 1459 aa22.6■■□□□ 1.21
TARDBP-231ENST00000639599 ANKRD50Q9ULJ7 1429 aa22.59■■□□□ 1.21
TARDBP-231ENST00000639599 LRRC7Q96NW7 1537 aa22.59■■□□□ 1.21
TARDBP-231ENST00000639599 EFCAB6Q5THR3 1501 aa22.58■■□□□ 1.21
TARDBP-231ENST00000639599 IDI1Q13907 227 aa22.58■■□□□ 1.21
TARDBP-231ENST00000639599 CFAP65Q6ZU64 1925 aaKnown RBP22.58■■□□□ 1.21
TARDBP-231ENST00000639599 PHF23Q9BUL5 403 aaPredicted RBP22.57■■□□□ 1.2
TARDBP-231ENST00000639599 PIK3C2BO00750 1634 aa22.57■■□□□ 1.2
TARDBP-231ENST00000639599 SLC52A1Q9NWF4 448 aa22.56■■□□□ 1.2
TARDBP-231ENST00000639599 PPP1R15AO75807 674 aaPredicted RBP22.53■■□□□ 1.2
TARDBP-231ENST00000639599 HDGFP51858 240 aaKnown RBP22.52■■□□□ 1.2
TARDBP-231ENST00000639599 NOS1P29475 1434 aa22.51■■□□□ 1.19
TARDBP-231ENST00000639599 RPRD2Q5VT52 1461 aaKnown RBP22.5■■□□□ 1.19
TARDBP-231ENST00000639599 ADGRB3O60242 1522 aa22.5■■□□□ 1.19
TARDBP-231ENST00000639599 CHGAP10645 457 aaKnown RBP22.49■■□□□ 1.19
TARDBP-231ENST00000639599 SLC26A8Q96RN1 970 aa22.49■■□□□ 1.19
TARDBP-231ENST00000639599 MED1Q15648 1581 aaPredicted RBP22.48■■□□□ 1.19
TARDBP-231ENST00000639599 ITGAEP38570 1179 aa22.48■■□□□ 1.19
TARDBP-231ENST00000639599 KCNA6P17658 529 aa22.47■■□□□ 1.19
TARDBP-231ENST00000639599 PROSER2Q86WR7 435 aaPredicted RBP22.47■■□□□ 1.19
TARDBP-231ENST00000639599 KDM5AP29375 1690 aaKnown RBP22.46■■□□□ 1.19
TARDBP-231ENST00000639599 STRCP1A6NGW2 1772 aa22.46■■□□□ 1.19
TARDBP-231ENST00000639599 TMEM94Q12767 1356 aa22.44■■□□□ 1.18
TARDBP-231ENST00000639599 ROCK1Q13464 1354 aa22.43■■□□□ 1.18
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms