RNA–Protein interactions for RNA: ENST00000638939.1

PDE4D-229, Transcript of phosphodiesterase 4D, humanhuman

TSL 5 BASIC

Gene PDE4D, Length 375 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE4D-229ENST00000638939 KDM5DQ9BY66 1539 aa8.96□□□□□ -0.97
PDE4D-229ENST00000638939 ARHGEF5Q12774 1597 aa8.96□□□□□ -0.97
PDE4D-229ENST00000638939 DNMT1P26358 1616 aaKnown RBP8.96□□□□□ -0.98
PDE4D-229ENST00000638939 RNF17Q9BXT8 1623 aaKnown RBP8.96□□□□□ -0.98
PDE4D-229ENST00000638939 RTN4Q9NQC3 1192 aaKnown RBP8.96□□□□□ -0.98
PDE4D-229ENST00000638939 SPAG9O60271 1321 aaKnown RBP8.96□□□□□ -0.98
PDE4D-229ENST00000638939 MTUS2Q5JR59 1369 aa8.96□□□□□ -0.98
PDE4D-229ENST00000638939 CCNB3Q8WWL7 1395 aa8.96□□□□□ -0.98
PDE4D-229ENST00000638939 CEP162Q5TB80 1403 aa8.96□□□□□ -0.98
PDE4D-229ENST00000638939 EIF2AK4Q9P2K8 1649 aaKnown RBP8.95□□□□□ -0.98
PDE4D-229ENST00000638939 SLC4A2P04920 1241 aa8.95□□□□□ -0.98
PDE4D-229ENST00000638939 ESF1Q9H501 851 aaKnown RBP8.95□□□□□ -0.98
PDE4D-229ENST00000638939 RTEL1-TNFRSF6BF6WH68 1400 aa8.95□□□□□ -0.98
PDE4D-229ENST00000638939 PTPRKQ15262 1439 aa8.95□□□□□ -0.98
PDE4D-229ENST00000638939 MBD5Q9P267 1494 aa8.95□□□□□ -0.98
PDE4D-229ENST00000638939 ZMYM3Q14202 1370 aa8.94□□□□□ -0.98
PDE4D-229ENST00000638939 CAMSAP2Q08AD1 1489 aa8.94□□□□□ -0.98
PDE4D-229ENST00000638939 CCDC141Q6ZP82 1450 aa8.94□□□□□ -0.98
PDE4D-229ENST00000638939 NEURL4Q96JN8 1562 aa8.94□□□□□ -0.98
PDE4D-229ENST00000638939 MAST1Q9Y2H9 1570 aa8.94□□□□□ -0.98
PDE4D-229ENST00000638939 CROCC2H7BZ55 1655 aa8.94□□□□□ -0.98
PDE4D-229ENST00000638939 DEPDC5O75140 1603 aa8.93□□□□□ -0.98
PDE4D-229ENST00000638939 A2ML1A8K2U0 1454 aa8.92□□□□□ -0.98
PDE4D-229ENST00000638939 CFDP1Q9UEE9 299 aaPredicted RBP8.92□□□□□ -0.98
PDE4D-229ENST00000638939 PZPP20742 1482 aa8.91□□□□□ -0.98
PDE4D-229ENST00000638939 NCOA2Q15596 1464 aa8.91□□□□□ -0.98
PDE4D-229ENST00000638939 ZNF777Q9ULD5 760 aaPredicted RBP8.91□□□□□ -0.98
PDE4D-229ENST00000638939 CEP152O94986 1710 aa8.91□□□□□ -0.98
PDE4D-229ENST00000638939 HNRNPMP52272 730 aaKnown RBP eCLIP8.9□□□□□ -0.98
PDE4D-229ENST00000638939 FKBP8Q14318 412 aa8.9□□□□□ -0.98
PDE4D-229ENST00000638939 IQGAP1P46940 1657 aa8.9□□□□□ -0.98
PDE4D-229ENST00000638939 MROH1Q8NDA8 1641 aa8.9□□□□□ -0.99
PDE4D-229ENST00000638939 SYNMO15061 1565 aa8.9□□□□□ -0.99
PDE4D-229ENST00000638939 CPS1P31327 1500 aa8.89□□□□□ -0.99
PDE4D-229ENST00000638939 MAP3K1Q13233 1512 aa8.88□□□□□ -0.99
PDE4D-229ENST00000638939 NLRP1Q9C000 1473 aa8.88□□□□□ -0.99
PDE4D-229ENST00000638939 UBR1Q8IWV7 1749 aa8.88□□□□□ -0.99
PDE4D-229ENST00000638939 DHX29Q7Z478 1369 aaKnown RBP8.87□□□□□ -0.99
PDE4D-229ENST00000638939 VWDEQ8N2E2 1590 aa8.87□□□□□ -0.99
PDE4D-229ENST00000638939 STRCP1A6NGW2 1772 aa8.87□□□□□ -0.99
PDE4D-229ENST00000638939 PKD2Q13563 968 aa8.87□□□□□ -0.99
PDE4D-229ENST00000638939 CFAP65Q6ZU64 1925 aaKnown RBP8.87□□□□□ -0.99
PDE4D-229ENST00000638939 DISP3Q9P2K9 1392 aa8.86□□□□□ -0.99
PDE4D-229ENST00000638939 ABCC3O15438 1527 aa8.86□□□□□ -0.99
PDE4D-229ENST00000638939 PRDM15P57071 1507 aaPredicted RBP8.86□□□□□ -0.99
PDE4D-229ENST00000638939 KDM5AP29375 1690 aaKnown RBP8.86□□□□□ -0.99
PDE4D-229ENST00000638939 UGGT1Q9NYU2 1555 aa8.86□□□□□ -0.99
PDE4D-229ENST00000638939 ZNF644Q9H582 1327 aaPredicted RBP8.85□□□□□ -0.99
PDE4D-229ENST00000638939 MED14O60244 1454 aa8.85□□□□□ -0.99
PDE4D-229ENST00000638939 LRRC9Q6ZRR7 1453 aa8.85□□□□□ -0.99
PDE4D-229ENST00000638939 TNRQ92752 1358 aa8.85□□□□□ -0.99
PDE4D-229ENST00000638939 ZNF335Q9H4Z2 1342 aaPredicted RBP8.84□□□□□ -0.99
PDE4D-229ENST00000638939 GGT6Q6P531 493 aa8.84□□□□□ -0.99
PDE4D-229ENST00000638939 VPS8Q8N3P4 1428 aa8.84□□□□□ -0.99
PDE4D-229ENST00000638939 XIRP1Q702N8 1843 aaKnown RBP8.84□□□□□ -0.99
PDE4D-229ENST00000638939 NCKAP5LQ9HCH0 1330 aa8.83□□□□□ -1
PDE4D-229ENST00000638939 DUOX2Q9NRD8 1548 aa8.83□□□□□ -1
PDE4D-229ENST00000638939 ALKQ9UM73 1620 aa8.83□□□□□ -1
PDE4D-229ENST00000638939 SHANK2Q9UPX8 1470 aa8.83□□□□□ -1
PDE4D-229ENST00000638939 MED1Q15648 1581 aaPredicted RBP8.82□□□□□ -1
PDE4D-229ENST00000638939 RSPH4AQ5TD94 716 aa8.82□□□□□ -1
PDE4D-229ENST00000638939 ERVK-7P63135 1459 aa8.82□□□□□ -1
PDE4D-229ENST00000638939 MIA2Q96PC5 1412 aa8.81□□□□□ -1
PDE4D-229ENST00000638939 PTPN23Q9H3S7 1636 aa8.81□□□□□ -1
PDE4D-229ENST00000638939 MYOM3Q5VTT5 1437 aa8.8□□□□□ -1
PDE4D-229ENST00000638939 SOCS7O14512 581 aa8.8□□□□□ -1
PDE4D-229ENST00000638939 ILDR2Q71H61 639 aa8.8□□□□□ -1
PDE4D-229ENST00000638939 PIK3C2BO00750 1634 aa8.8□□□□□ -1
PDE4D-229ENST00000638939 KIF3BO15066 747 aa8.79□□□□□ -1
PDE4D-229ENST00000638939 SAMD1Q6SPF0 538 aaPredicted RBP8.79□□□□□ -1
PDE4D-229ENST00000638939 SLIT1O75093 1534 aa8.79□□□□□ -1
PDE4D-229ENST00000638939 NPHP4O75161 1426 aaPredicted RBP8.79□□□□□ -1
PDE4D-229ENST00000638939 ERBINQ96RT1 1412 aa8.79□□□□□ -1
PDE4D-229ENST00000638939 UBAP1LF5GYI3 381 aa8.78□□□□□ -1
PDE4D-229ENST00000638939 WASHC2CQ9Y4E1 1318 aa8.78□□□□□ -1
PDE4D-229ENST00000638939 ARHGAP23Q9P227 1491 aa8.77□□□□□ -1
PDE4D-229ENST00000638939 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP8.77□□□□□ -1.01
PDE4D-229ENST00000638939 ARHGAP31Q2M1Z3 1444 aa8.77□□□□□ -1.01
PDE4D-229ENST00000638939 MYO5BQ9ULV0 1848 aa8.77□□□□□ -1.01
PDE4D-229ENST00000638939 LMTK2Q8IWU2 1503 aa8.76□□□□□ -1.01
PDE4D-229ENST00000638939 FBXO31Q5XUX0 539 aaPredicted RBP8.76□□□□□ -1.01
PDE4D-229ENST00000638939 SCAF11Q99590 1463 aaKnown RBP8.76□□□□□ -1.01
PDE4D-229ENST00000638939 GCC2Q8IWJ2 1684 aa8.75□□□□□ -1.01
PDE4D-229ENST00000638939 EFCAB6Q5THR3 1501 aa8.75□□□□□ -1.01
PDE4D-229ENST00000638939 LRRC7Q96NW7 1537 aa8.75□□□□□ -1.01
PDE4D-229ENST00000638939 TSPY4P0CV99 314 aa8.75□□□□□ -1.01
PDE4D-229ENST00000638939 TSPY10P0CW01 314 aa8.75□□□□□ -1.01
PDE4D-229ENST00000638939 THEMISQ8N1K5 641 aaPredicted RBP8.75□□□□□ -1.01
PDE4D-229ENST00000638939 ANKLE2Q86XL3 938 aa8.74□□□□□ -1.01
PDE4D-229ENST00000638939 ADGRB3O60242 1522 aa8.74□□□□□ -1.01
PDE4D-229ENST00000638939 KIF15Q9NS87 1388 aa8.73□□□□□ -1.01
PDE4D-229ENST00000638939 NWD1Q149M9 1564 aa8.73□□□□□ -1.01
PDE4D-229ENST00000638939 APLP2Q06481 763 aa8.73□□□□□ -1.01
PDE4D-229ENST00000638939 ABCC5O15440 1437 aa8.72□□□□□ -1.01
PDE4D-229ENST00000638939 DAPK1P53355 1430 aa8.72□□□□□ -1.01
PDE4D-229ENST00000638939 TET3O43151 1660 aa8.72□□□□□ -1.01
PDE4D-229ENST00000638939 FGD6Q6ZV73 1430 aa8.71□□□□□ -1.01
PDE4D-229ENST00000638939 ADGRL2O95490 1459 aa8.71□□□□□ -1.01
PDE4D-229ENST00000638939 CHD2O14647 1828 aaKnown RBP8.71□□□□□ -1.01
PDE4D-229ENST00000638939 UNC13BO14795 1591 aa8.71□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms