RNA–Protein interactions for RNA: ENST00000638755.1

PAX6-238, Transcript of paired box 6, humanhuman

TSL 5 BASIC

Gene PAX6, Length 1,161 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAX6-238ENST00000638755 NPHP4O75161 1426 aaPredicted RBP19.39■□□□□ 0.69
PAX6-238ENST00000638755 GPATCH8Q9UKJ3 1502 aaKnown RBP19.38■□□□□ 0.69
PAX6-238ENST00000638755 THEMISQ8N1K5 641 aaPredicted RBP19.37■□□□□ 0.69
PAX6-238ENST00000638755 CFDP1Q9UEE9 299 aaPredicted RBP19.37■□□□□ 0.69
PAX6-238ENST00000638755 KIAA1107Q9UPP5 1409 aa19.36■□□□□ 0.69
PAX6-238ENST00000638755 CASKIN1Q8WXD9 1431 aa19.35■□□□□ 0.69
PAX6-238ENST00000638755 ADGBQ8N7X0 1667 aa19.35■□□□□ 0.69
PAX6-238ENST00000638755 LRRC7Q96NW7 1537 aa19.35■□□□□ 0.69
PAX6-238ENST00000638755 POTEAQ6S8J7 498 aa19.34■□□□□ 0.69
PAX6-238ENST00000638755 PLEKHH2Q8IVE3 1493 aa19.34■□□□□ 0.69
PAX6-238ENST00000638755 MED14O60244 1454 aa19.33■□□□□ 0.68
PAX6-238ENST00000638755 RNF17Q9BXT8 1623 aaKnown RBP19.33■□□□□ 0.68
PAX6-238ENST00000638755 STRCP1A6NGW2 1772 aa19.32■□□□□ 0.68
PAX6-238ENST00000638755 UGGT1Q9NYU2 1555 aa19.32■□□□□ 0.68
PAX6-238ENST00000638755 FAM135AQ9P2D6 1515 aa19.31■□□□□ 0.68
PAX6-238ENST00000638755 PZPP20742 1482 aa19.31■□□□□ 0.68
PAX6-238ENST00000638755 DEPDC5O75140 1603 aa19.31■□□□□ 0.68
PAX6-238ENST00000638755 IQGAP1P46940 1657 aa19.3■□□□□ 0.68
PAX6-238ENST00000638755 KIF3BO15066 747 aa19.3■□□□□ 0.68
PAX6-238ENST00000638755 CCNB3Q8WWL7 1395 aa19.3■□□□□ 0.68
PAX6-238ENST00000638755 MIA2Q96PC5 1412 aa19.29■□□□□ 0.68
PAX6-238ENST00000638755 WASHC2CQ9Y4E1 1318 aa19.28■□□□□ 0.68
PAX6-238ENST00000638755 DHX29Q7Z478 1369 aaKnown RBP19.28■□□□□ 0.68
PAX6-238ENST00000638755 NLRP1Q9C000 1473 aa19.28■□□□□ 0.68
PAX6-238ENST00000638755 ZNF644Q9H582 1327 aaPredicted RBP19.27■□□□□ 0.68
PAX6-238ENST00000638755 SYNMO15061 1565 aa19.27■□□□□ 0.67
PAX6-238ENST00000638755 KDM5DQ9BY66 1539 aa19.26■□□□□ 0.67
PAX6-238ENST00000638755 FYCO1Q9BQS8 1478 aa19.22■□□□□ 0.67
PAX6-238ENST00000638755 CHIC1Q5VXU3 224 aa19.22■□□□□ 0.67
PAX6-238ENST00000638755 SETD1AO15047 1707 aaKnown RBP19.22■□□□□ 0.67
PAX6-238ENST00000638755 RTEL1-TNFRSF6BF6WH68 1400 aa19.21■□□□□ 0.67
PAX6-238ENST00000638755 MBD5Q9P267 1494 aa19.19■□□□□ 0.66
PAX6-238ENST00000638755 MTUS2Q5JR59 1369 aa19.16■□□□□ 0.66
PAX6-238ENST00000638755 FAM135BQ49AJ0 1406 aa19.16■□□□□ 0.66
PAX6-238ENST00000638755 ZC3H13Q5T200 1668 aaKnown RBP19.15■□□□□ 0.66
PAX6-238ENST00000638755 XIRP1Q702N8 1843 aaKnown RBP19.14■□□□□ 0.65
PAX6-238ENST00000638755 TIAM1Q13009 1591 aa19.11■□□□□ 0.65
PAX6-238ENST00000638755 SCAF11Q99590 1463 aaKnown RBP19.11■□□□□ 0.65
PAX6-238ENST00000638755 LTKP29376 864 aa19.1■□□□□ 0.65
PAX6-238ENST00000638755 TXNDC2Q86VQ3 553 aa19.1■□□□□ 0.65
PAX6-238ENST00000638755 UPF1Q92900 1129 aaKnown RBP eCLIP19.09■□□□□ 0.65
PAX6-238ENST00000638755 CCDC141Q6ZP82 1450 aa19.09■□□□□ 0.65
PAX6-238ENST00000638755 ROBO1Q9Y6N7 1651 aa19.08■□□□□ 0.65
PAX6-238ENST00000638755 ERVK-7P63135 1459 aa19.08■□□□□ 0.64
PAX6-238ENST00000638755 TMEM94Q12767 1356 aa19.06■□□□□ 0.64
PAX6-238ENST00000638755 UBR1Q8IWV7 1749 aa19.06■□□□□ 0.64
PAX6-238ENST00000638755 RBM33Q96EV2 1170 aaKnown RBP19.06■□□□□ 0.64
PAX6-238ENST00000638755 CFAP65Q6ZU64 1925 aaKnown RBP19.05■□□□□ 0.64
PAX6-238ENST00000638755 ABCC3O15438 1527 aa19.05■□□□□ 0.64
PAX6-238ENST00000638755 NCOA2Q15596 1464 aa19.04■□□□□ 0.64
PAX6-238ENST00000638755 TRIM52Q96A61 297 aa19.04■□□□□ 0.64
PAX6-238ENST00000638755 EID1Q9Y6B2 187 aa19.04■□□□□ 0.64
PAX6-238ENST00000638755 RSPH4AQ5TD94 716 aa19.02■□□□□ 0.64
PAX6-238ENST00000638755 PROSER2Q86WR7 435 aaPredicted RBP19.02■□□□□ 0.64
PAX6-238ENST00000638755 CAMSAP2Q08AD1 1489 aa19.02■□□□□ 0.63
PAX6-238ENST00000638755 TSPY4P0CV99 314 aa19.01■□□□□ 0.63
PAX6-238ENST00000638755 TSPY10P0CW01 314 aa19.01■□□□□ 0.63
PAX6-238ENST00000638755 ARHGAP23Q9P227 1491 aa19.01■□□□□ 0.63
PAX6-238ENST00000638755 SLIT1O75093 1534 aa19■□□□□ 0.63
PAX6-238ENST00000638755 JCADQ9P266 1359 aa19■□□□□ 0.63
PAX6-238ENST00000638755 PHLPP1O60346 1717 aa18.99■□□□□ 0.63
PAX6-238ENST00000638755 EHBP1L1Q8N3D4 1523 aa18.99■□□□□ 0.63
PAX6-238ENST00000638755 KCNA6P17658 529 aa18.98■□□□□ 0.63
PAX6-238ENST00000638755 MEX3CQ5U5Q3 659 aaKnown RBP18.98■□□□□ 0.63
PAX6-238ENST00000638755 CEP162Q5TB80 1403 aa18.98■□□□□ 0.63
PAX6-238ENST00000638755 LRRC9Q6ZRR7 1453 aa18.97■□□□□ 0.63
PAX6-238ENST00000638755 MAP3K1Q13233 1512 aa18.97■□□□□ 0.63
PAX6-238ENST00000638755 ZNF772Q68DY9 489 aaPredicted RBP18.96■□□□□ 0.63
PAX6-238ENST00000638755 SLC26A8Q96RN1 970 aa18.96■□□□□ 0.63
PAX6-238ENST00000638755 SLAIN2Q9P270 581 aa18.96■□□□□ 0.63
PAX6-238ENST00000638755 CEP152O94986 1710 aa18.95■□□□□ 0.62
PAX6-238ENST00000638755 STAG3Q9UJ98 1225 aa18.95■□□□□ 0.62
PAX6-238ENST00000638755 SRCAPQ6ZRS2 3230 aa18.95■□□□□ 0.62
PAX6-238ENST00000638755 TMEM2Q9UHN6 1383 aa18.93■□□□□ 0.62
PAX6-238ENST00000638755 MSH6P52701 1360 aa18.93■□□□□ 0.62
PAX6-238ENST00000638755 LRP6O75581 1613 aa18.92■□□□□ 0.62
PAX6-238ENST00000638755 ARHGEF5Q12774 1597 aa18.91■□□□□ 0.62
PAX6-238ENST00000638755 RXRBP28702 533 aa18.91■□□□□ 0.62
PAX6-238ENST00000638755 MROH1Q8NDA8 1641 aa18.91■□□□□ 0.62
PAX6-238ENST00000638755 PRDM15P57071 1507 aaPredicted RBP18.9■□□□□ 0.62
PAX6-238ENST00000638755 PIK3C2BO00750 1634 aa18.89■□□□□ 0.62
PAX6-238ENST00000638755 SPATA31A6Q5VVP1 1343 aa18.89■□□□□ 0.61
PAX6-238ENST00000638755 EIF2AK4Q9P2K8 1649 aaKnown RBP18.89■□□□□ 0.61
PAX6-238ENST00000638755 BCANQ96GW7 911 aa18.88■□□□□ 0.61
PAX6-238ENST00000638755 COL16A1Q07092 1604 aaPredicted RBP18.87■□□□□ 0.61
PAX6-238ENST00000638755 NKTRP30414 1462 aaKnown RBP18.86■□□□□ 0.61
PAX6-238ENST00000638755 TET3O43151 1660 aa18.85■□□□□ 0.61
PAX6-238ENST00000638755 EFCAB6Q5THR3 1501 aa18.84■□□□□ 0.61
PAX6-238ENST00000638755 ARHGAP31Q2M1Z3 1444 aa18.84■□□□□ 0.61
PAX6-238ENST00000638755 FGD6Q6ZV73 1430 aa18.83■□□□□ 0.61
PAX6-238ENST00000638755 NUTM2BA6NNL0 878 aaPredicted RBP18.83■□□□□ 0.6
PAX6-238ENST00000638755 NUTM2EB1AL46 878 aaPredicted RBP18.83■□□□□ 0.6
PAX6-238ENST00000638755 NUTM2AQ8IVF1 878 aaPredicted RBP18.83■□□□□ 0.6
PAX6-238ENST00000638755 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.83■□□□□ 0.6
PAX6-238ENST00000638755 MAST1Q9Y2H9 1570 aa18.83■□□□□ 0.6
PAX6-238ENST00000638755 NWD1Q149M9 1564 aa18.82■□□□□ 0.6
PAX6-238ENST00000638755 IDI1Q13907 227 aa18.82■□□□□ 0.6
PAX6-238ENST00000638755 C14orf37Q86TY3 774 aa18.8■□□□□ 0.6
PAX6-238ENST00000638755 CDK12Q9NYV4 1490 aaPredicted RBP18.79■□□□□ 0.6
PAX6-238ENST00000638755 DUOX2Q9NRD8 1548 aa18.78■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 64.9 ms