RNA–Protein interactions for RNA: ENST00000638578.1

STRADA-228, Transcript of STE20-related kinase adaptor alpha, humanhuman

TSL 3

Gene STRADA, Length 704 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
STRADA-228ENST00000638578 FAM135AQ9P2D6 1515 aa12.42□□□□□ -0.42
STRADA-228ENST00000638578 SPAG9O60271 1321 aaKnown RBP12.42□□□□□ -0.42
STRADA-228ENST00000638578 NCKAP5LQ9HCH0 1330 aa12.42□□□□□ -0.42
STRADA-228ENST00000638578 KIAA1107Q9UPP5 1409 aa12.42□□□□□ -0.42
STRADA-228ENST00000638578 DCAF8L1A6NGE4 600 aa12.41□□□□□ -0.42
STRADA-228ENST00000638578 NEURL4Q96JN8 1562 aa12.41□□□□□ -0.42
STRADA-228ENST00000638578 GPATCH8Q9UKJ3 1502 aaKnown RBP12.41□□□□□ -0.42
STRADA-228ENST00000638578 DEPDC5O75140 1603 aa12.39□□□□□ -0.43
STRADA-228ENST00000638578 ZNF777Q9ULD5 760 aaPredicted RBP12.37□□□□□ -0.43
STRADA-228ENST00000638578 SYNMO15061 1565 aa12.37□□□□□ -0.43
STRADA-228ENST00000638578 KDM5DQ9BY66 1539 aa12.37□□□□□ -0.43
STRADA-228ENST00000638578 IQGAP1P46940 1657 aa12.36□□□□□ -0.43
STRADA-228ENST00000638578 SHANK2Q9UPX8 1470 aa12.36□□□□□ -0.43
STRADA-228ENST00000638578 TOM1O60784 492 aa12.35□□□□□ -0.43
STRADA-228ENST00000638578 EHMT2Q96KQ7 1210 aa12.35□□□□□ -0.43
STRADA-228ENST00000638578 RNF17Q9BXT8 1623 aaKnown RBP12.35□□□□□ -0.43
STRADA-228ENST00000638578 TIAM1Q13009 1591 aa12.35□□□□□ -0.43
STRADA-228ENST00000638578 VWDEQ8N2E2 1590 aa12.35□□□□□ -0.43
STRADA-228ENST00000638578 PZPP20742 1482 aa12.34□□□□□ -0.43
STRADA-228ENST00000638578 HNRNPMP52272 730 aaKnown RBP eCLIP12.34□□□□□ -0.43
STRADA-228ENST00000638578 GGT6Q6P531 493 aa12.34□□□□□ -0.43
STRADA-228ENST00000638578 ZC3H13Q5T200 1668 aaKnown RBP12.34□□□□□ -0.43
STRADA-228ENST00000638578 RTEL1-TNFRSF6BF6WH68 1400 aa12.34□□□□□ -0.43
STRADA-228ENST00000638578 CCNB3Q8WWL7 1395 aa12.33□□□□□ -0.44
STRADA-228ENST00000638578 EHBP1L1Q8N3D4 1523 aa12.32□□□□□ -0.44
STRADA-228ENST00000638578 HSPA1LP34931 641 aa12.32□□□□□ -0.44
STRADA-228ENST00000638578 CFDP1Q9UEE9 299 aaPredicted RBP12.32□□□□□ -0.44
STRADA-228ENST00000638578 STRCP1A6NGW2 1772 aa12.32□□□□□ -0.44
STRADA-228ENST00000638578 MED14O60244 1454 aa12.32□□□□□ -0.44
STRADA-228ENST00000638578 NLRP1Q9C000 1473 aa12.32□□□□□ -0.44
STRADA-228ENST00000638578 TNRQ92752 1358 aa12.31□□□□□ -0.44
STRADA-228ENST00000638578 UGGT1Q9NYU2 1555 aa12.31□□□□□ -0.44
STRADA-228ENST00000638578 ALKQ9UM73 1620 aa12.31□□□□□ -0.44
STRADA-228ENST00000638578 PIP4K2BP78356 416 aa12.3□□□□□ -0.44
STRADA-228ENST00000638578 MTUS2Q5JR59 1369 aa12.3□□□□□ -0.44
STRADA-228ENST00000638578 DHX29Q7Z478 1369 aaKnown RBP12.29□□□□□ -0.44
STRADA-228ENST00000638578 MBD5Q9P267 1494 aa12.28□□□□□ -0.44
STRADA-228ENST00000638578 NPHP4O75161 1426 aaPredicted RBP12.28□□□□□ -0.44
STRADA-228ENST00000638578 CCDC141Q6ZP82 1450 aa12.27□□□□□ -0.44
STRADA-228ENST00000638578 EIF2AK4Q9P2K8 1649 aaKnown RBP12.26□□□□□ -0.45
STRADA-228ENST00000638578 UBR1Q8IWV7 1749 aa12.26□□□□□ -0.45
STRADA-228ENST00000638578 XIRP1Q702N8 1843 aaKnown RBP12.26□□□□□ -0.45
STRADA-228ENST00000638578 ANKLE2Q86XL3 938 aa12.26□□□□□ -0.45
STRADA-228ENST00000638578 THEMISQ8N1K5 641 aaPredicted RBP12.26□□□□□ -0.45
STRADA-228ENST00000638578 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP12.25□□□□□ -0.45
STRADA-228ENST00000638578 ARHGEF5Q12774 1597 aa12.25□□□□□ -0.45
STRADA-228ENST00000638578 CEP152O94986 1710 aa12.24□□□□□ -0.45
STRADA-228ENST00000638578 CEP162Q5TB80 1403 aa12.24□□□□□ -0.45
STRADA-228ENST00000638578 CFAP65Q6ZU64 1925 aaKnown RBP12.24□□□□□ -0.45
STRADA-228ENST00000638578 LRRC7Q96NW7 1537 aa12.24□□□□□ -0.45
STRADA-228ENST00000638578 MIA2Q96PC5 1412 aa12.24□□□□□ -0.45
STRADA-228ENST00000638578 CAMSAP2Q08AD1 1489 aa12.23□□□□□ -0.45
STRADA-228ENST00000638578 WASHC2CQ9Y4E1 1318 aa12.22□□□□□ -0.45
STRADA-228ENST00000638578 KIF3BO15066 747 aa12.22□□□□□ -0.45
STRADA-228ENST00000638578 FBXO31Q5XUX0 539 aaPredicted RBP12.21□□□□□ -0.45
STRADA-228ENST00000638578 MAST1Q9Y2H9 1570 aa12.21□□□□□ -0.46
STRADA-228ENST00000638578 ABCC3O15438 1527 aa12.21□□□□□ -0.46
STRADA-228ENST00000638578 RSPH4AQ5TD94 716 aa12.2□□□□□ -0.46
STRADA-228ENST00000638578 ZNF644Q9H582 1327 aaPredicted RBP12.19□□□□□ -0.46
STRADA-228ENST00000638578 SLC4A1APQ9BWU0 796 aaKnown RBP12.19□□□□□ -0.46
STRADA-228ENST00000638578 ERVK-7P63135 1459 aa12.19□□□□□ -0.46
STRADA-228ENST00000638578 KDM5AP29375 1690 aaKnown RBP12.19□□□□□ -0.46
STRADA-228ENST00000638578 SCAF11Q99590 1463 aaKnown RBP12.17□□□□□ -0.46
STRADA-228ENST00000638578 MROH1Q8NDA8 1641 aa12.17□□□□□ -0.46
STRADA-228ENST00000638578 SLIT1O75093 1534 aa12.16□□□□□ -0.46
STRADA-228ENST00000638578 NCOA2Q15596 1464 aa12.16□□□□□ -0.46
STRADA-228ENST00000638578 ARHGAP23Q9P227 1491 aa12.14□□□□□ -0.47
STRADA-228ENST00000638578 ROBO1Q9Y6N7 1651 aa12.14□□□□□ -0.47
STRADA-228ENST00000638578 CROCC2H7BZ55 1655 aa12.13□□□□□ -0.47
STRADA-228ENST00000638578 PIK3C2BO00750 1634 aa12.13□□□□□ -0.47
STRADA-228ENST00000638578 PRDM15P57071 1507 aaPredicted RBP12.12□□□□□ -0.47
STRADA-228ENST00000638578 SETD1AO15047 1707 aaKnown RBP12.11□□□□□ -0.47
STRADA-228ENST00000638578 LRRC9Q6ZRR7 1453 aa12.11□□□□□ -0.47
STRADA-228ENST00000638578 TSPY4P0CV99 314 aa12.11□□□□□ -0.47
STRADA-228ENST00000638578 TSPY10P0CW01 314 aa12.11□□□□□ -0.47
STRADA-228ENST00000638578 DUOX2Q9NRD8 1548 aa12.11□□□□□ -0.47
STRADA-228ENST00000638578 FAM135BQ49AJ0 1406 aa12.11□□□□□ -0.47
STRADA-228ENST00000638578 PHLPP1O60346 1717 aa12.1□□□□□ -0.47
STRADA-228ENST00000638578 ARHGAP31Q2M1Z3 1444 aa12.09□□□□□ -0.47
STRADA-228ENST00000638578 RGS17Q9UGC6 210 aaPredicted RBP12.08□□□□□ -0.48
STRADA-228ENST00000638578 NWD1Q149M9 1564 aa12.08□□□□□ -0.48
STRADA-228ENST00000638578 MAP3K1Q13233 1512 aa12.07□□□□□ -0.48
STRADA-228ENST00000638578 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.07□□□□□ -0.48
STRADA-228ENST00000638578 NKTRP30414 1462 aaKnown RBP12.07□□□□□ -0.48
STRADA-228ENST00000638578 EID1Q9Y6B2 187 aa12.06□□□□□ -0.48
STRADA-228ENST00000638578 EFCAB6Q5THR3 1501 aa12.06□□□□□ -0.48
STRADA-228ENST00000638578 ERBINQ96RT1 1412 aa12.05□□□□□ -0.48
STRADA-228ENST00000638578 CHD2O14647 1828 aaKnown RBP12.04□□□□□ -0.48
STRADA-228ENST00000638578 TXNDC2Q86VQ3 553 aa12.04□□□□□ -0.48
STRADA-228ENST00000638578 TET3O43151 1660 aa12.03□□□□□ -0.48
STRADA-228ENST00000638578 MYO5BQ9ULV0 1848 aa12.03□□□□□ -0.48
STRADA-228ENST00000638578 LTKP29376 864 aa12.03□□□□□ -0.48
STRADA-228ENST00000638578 TMEM2Q9UHN6 1383 aa12.03□□□□□ -0.48
STRADA-228ENST00000638578 MYOM3Q5VTT5 1437 aa12.03□□□□□ -0.48
STRADA-228ENST00000638578 ADGRB3O60242 1522 aa12.02□□□□□ -0.48
STRADA-228ENST00000638578 POTEAQ6S8J7 498 aa12.02□□□□□ -0.49
STRADA-228ENST00000638578 TMEM94Q12767 1356 aa12.02□□□□□ -0.49
STRADA-228ENST00000638578 COL16A1Q07092 1604 aaPredicted RBP12.01□□□□□ -0.49
STRADA-228ENST00000638578 SHPRHQ149N8 1683 aa12.01□□□□□ -0.49
STRADA-228ENST00000638578 LMTK2Q8IWU2 1503 aa12.01□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms