RNA–Protein interactions for RNA: ENST00000638454.1

PRAMEF13-202, Transcript of PRAME family member 13, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PRAMEF13, Length 1,331 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRAMEF13-202ENST00000638454 KIF15Q9NS87 1388 aa15.5■□□□□ 0.07
PRAMEF13-202ENST00000638454 TRIM52Q96A61 297 aa15.49■□□□□ 0.07
PRAMEF13-202ENST00000638454 RTEL1-TNFRSF6BF6WH68 1400 aa15.49■□□□□ 0.07
PRAMEF13-202ENST00000638454 ANKRD50Q9ULJ7 1429 aa15.49■□□□□ 0.07
PRAMEF13-202ENST00000638454 PLXNC1O60486 1568 aa15.49■□□□□ 0.07
PRAMEF13-202ENST00000638454 SPAG9O60271 1321 aaKnown RBP15.48■□□□□ 0.07
PRAMEF13-202ENST00000638454 SCAPERQ9BY12 1400 aa15.48■□□□□ 0.07
PRAMEF13-202ENST00000638454 MAP3K4Q9Y6R4 1608 aa15.48■□□□□ 0.07
PRAMEF13-202ENST00000638454 FAM69CQ0P6D2 419 aa15.46■□□□□ 0.07
PRAMEF13-202ENST00000638454 ZNF518AQ6AHZ1 1483 aa15.46■□□□□ 0.07
PRAMEF13-202ENST00000638454 TEX14Q8IWB6 1497 aa15.46■□□□□ 0.07
PRAMEF13-202ENST00000638454 DIP2BQ9P265 1576 aa15.46■□□□□ 0.07
PRAMEF13-202ENST00000638454 ARHGEF12Q9NZN5 1544 aa15.45■□□□□ 0.06
PRAMEF13-202ENST00000638454 DUOX2Q9NRD8 1548 aa15.45■□□□□ 0.06
PRAMEF13-202ENST00000638454 MYT1LQ9UL68 1186 aa15.44■□□□□ 0.06
PRAMEF13-202ENST00000638454 TRAPPC8Q9Y2L5 1435 aa15.44■□□□□ 0.06
PRAMEF13-202ENST00000638454 ERBINQ96RT1 1412 aa15.42■□□□□ 0.06
PRAMEF13-202ENST00000638454 POGZQ7Z3K3 1410 aa15.41■□□□□ 0.06
PRAMEF13-202ENST00000638454 ATP7AQ04656 1500 aa15.41■□□□□ 0.06
PRAMEF13-202ENST00000638454 ZFYVE16Q7Z3T8 1539 aa15.41■□□□□ 0.06
PRAMEF13-202ENST00000638454 DENND4BO75064 1496 aaPredicted RBP15.4■□□□□ 0.06
PRAMEF13-202ENST00000638454 AFAP1Q8N556 730 aa15.4■□□□□ 0.06
PRAMEF13-202ENST00000638454 INO80Q9ULG1 1556 aaPredicted RBP15.39■□□□□ 0.05
PRAMEF13-202ENST00000638454 KDM6BO15054 1643 aa15.39■□□□□ 0.05
PRAMEF13-202ENST00000638454 MPHOSPH9Q99550 1183 aa15.39■□□□□ 0.05
PRAMEF13-202ENST00000638454 TIMELESSQ9UNS1 1208 aa15.39■□□□□ 0.05
PRAMEF13-202ENST00000638454 KDM5CP41229 1560 aa15.37■□□□□ 0.05
PRAMEF13-202ENST00000638454 KDM5DQ9BY66 1539 aa15.36■□□□□ 0.05
PRAMEF13-202ENST00000638454 NUP155O75694 1391 aa15.36■□□□□ 0.05
PRAMEF13-202ENST00000638454 MLH3Q9UHC1 1453 aa15.35■□□□□ 0.05
PRAMEF13-202ENST00000638454 HECW2Q9P2P5 1572 aa15.35■□□□□ 0.05
PRAMEF13-202ENST00000638454 KDM2AQ9Y2K7 1162 aa15.35■□□□□ 0.05
PRAMEF13-202ENST00000638454 UNC13BO14795 1591 aa15.33■□□□□ 0.04
PRAMEF13-202ENST00000638454 DNAJC5Q9H3Z4 198 aa15.33■□□□□ 0.04
PRAMEF13-202ENST00000638454 EIF2AK4Q9P2K8 1649 aaKnown RBP15.33■□□□□ 0.04
PRAMEF13-202ENST00000638454 KANK1Q14678 1352 aa15.32■□□□□ 0.04
PRAMEF13-202ENST00000638454 BBXQ8WY36 941 aaPredicted RBP15.32■□□□□ 0.04
PRAMEF13-202ENST00000638454 ZBTB4Q9P1Z0 1013 aaPredicted RBP15.32■□□□□ 0.04
PRAMEF13-202ENST00000638454 KIF13AQ9H1H9 1805 aa15.31■□□□□ 0.04
PRAMEF13-202ENST00000638454 TSPOAP1O95153 1857 aa15.31■□□□□ 0.04
PRAMEF13-202ENST00000638454 DHX29Q7Z478 1369 aaKnown RBP15.31■□□□□ 0.04
PRAMEF13-202ENST00000638454 PZPP20742 1482 aa15.3■□□□□ 0.04
PRAMEF13-202ENST00000638454 TONSLQ96HA7 1378 aa15.3■□□□□ 0.04
PRAMEF13-202ENST00000638454 KIDINS220Q9ULH0 1771 aa15.3■□□□□ 0.04
PRAMEF13-202ENST00000638454 NEUROD1Q13562 356 aa15.29■□□□□ 0.04
PRAMEF13-202ENST00000638454 TPRNQ4KMQ1 711 aa15.29■□□□□ 0.04
PRAMEF13-202ENST00000638454 A2MP01023 1474 aa15.29■□□□□ 0.04
PRAMEF13-202ENST00000638454 MAGI2Q86UL8 1455 aa15.29■□□□□ 0.04
PRAMEF13-202ENST00000638454 RICTORQ6R327 1708 aa15.28■□□□□ 0.04
PRAMEF13-202ENST00000638454 FAM135AQ9P2D6 1515 aa15.28■□□□□ 0.04
PRAMEF13-202ENST00000638454 PPRC1Q5VV67 1664 aaKnown RBP15.27■□□□□ 0.04
PRAMEF13-202ENST00000638454 ZMYM4Q5VZL5 1548 aa15.27■□□□□ 0.03
PRAMEF13-202ENST00000638454 IQGAP3Q86VI3 1631 aa15.27■□□□□ 0.03
PRAMEF13-202ENST00000638454 RAPGEF3O95398 923 aa15.26■□□□□ 0.03
PRAMEF13-202ENST00000638454 TRHP20396 242 aaPredicted RBP15.26■□□□□ 0.03
PRAMEF13-202ENST00000638454 POLA2Q14181 598 aa15.26■□□□□ 0.03
PRAMEF13-202ENST00000638454 PAXIP1Q6ZW49 1069 aaPredicted RBP15.26■□□□□ 0.03
PRAMEF13-202ENST00000638454 KIF3BO15066 747 aa15.24■□□□□ 0.03
PRAMEF13-202ENST00000638454 SIN3AQ96ST3 1273 aa15.24■□□□□ 0.03
PRAMEF13-202ENST00000638454 ANKRD30BQ9BXX2 1392 aa15.24■□□□□ 0.03
PRAMEF13-202ENST00000638454 DEPDC5O75140 1603 aa15.24■□□□□ 0.03
PRAMEF13-202ENST00000638454 ECM2O94769 699 aaPredicted RBP15.23■□□□□ 0.03
PRAMEF13-202ENST00000638454 SPOCK2Q92563 424 aa15.23■□□□□ 0.03
PRAMEF13-202ENST00000638454 ABCA6Q8N139 1617 aa15.22■□□□□ 0.03
PRAMEF13-202ENST00000638454 PRDM15P57071 1507 aaPredicted RBP15.21■□□□□ 0.03
PRAMEF13-202ENST00000638454 CFAP44Q96MT7 982 aa15.21■□□□□ 0.03
PRAMEF13-202ENST00000638454 BCORL1Q5H9F3 1711 aa15.21■□□□□ 0.02
PRAMEF13-202ENST00000638454 FRMPD1Q5SYB0 1578 aa15.21■□□□□ 0.02
PRAMEF13-202ENST00000638454 DIP2CQ9Y2E4 1556 aa15.21■□□□□ 0.02
PRAMEF13-202ENST00000638454 RPRD2Q5VT52 1461 aaKnown RBP15.21■□□□□ 0.02
PRAMEF13-202ENST00000638454 KLHL34Q8N239 644 aa15.2■□□□□ 0.02
PRAMEF13-202ENST00000638454 SPINK5Q9NQ38 1064 aaPredicted RBP15.2■□□□□ 0.02
PRAMEF13-202ENST00000638454 RNF17Q9BXT8 1623 aaKnown RBP15.2■□□□□ 0.02
PRAMEF13-202ENST00000638454 ATP10AO60312 1499 aa15.18■□□□□ 0.02
PRAMEF13-202ENST00000638454 TET3O43151 1660 aa15.18■□□□□ 0.02
PRAMEF13-202ENST00000638454 REREQ9P2R6 1566 aa15.17■□□□□ 0.02
PRAMEF13-202ENST00000638454 CCDC144AA2RUR9 1427 aa15.16■□□□□ 0.02
PRAMEF13-202ENST00000638454 VWDEQ8N2E2 1590 aa15.16■□□□□ 0.02
PRAMEF13-202ENST00000638454 YEATS2Q9ULM3 1422 aa15.14■□□□□ 0.01
PRAMEF13-202ENST00000638454 LMTK2Q8IWU2 1503 aa15.14■□□□□ 0.01
PRAMEF13-202ENST00000638454 ARHGEF40Q8TER5 1519 aa15.14■□□□□ 0.01
PRAMEF13-202ENST00000638454 PPP1R15AO75807 674 aaPredicted RBP15.14■□□□□ 0.01
PRAMEF13-202ENST00000638454 GGT6Q6P531 493 aa15.13■□□□□ 0.01
PRAMEF13-202ENST00000638454 MROH1Q8NDA8 1641 aa15.12■□□□□ 0.01
PRAMEF13-202ENST00000638454 ZC3H13Q5T200 1668 aaKnown RBP15.12■□□□□ 0.01
PRAMEF13-202ENST00000638454 AGLP35573 1532 aa15.12■□□□□ 0.01
PRAMEF13-202ENST00000638454 WASHC2CQ9Y4E1 1318 aa15.11■□□□□ 0.01
PRAMEF13-202ENST00000638454 EFCAB6Q5THR3 1501 aa15.1■□□□□ 0.01
PRAMEF13-202ENST00000638454 ZNF316A6NFI3 1004 aaPredicted RBP15.1■□□□□ 0.01
PRAMEF13-202ENST00000638454 E9PCH4 1651 aa15.09■□□□□ 0.01
PRAMEF13-202ENST00000638454 RGL2O15211 777 aa15.09■□□□□ 0.01
PRAMEF13-202ENST00000638454 TRPM2O94759 1503 aa15.08■□□□□ 0.01
PRAMEF13-202ENST00000638454 L3MBTL2Q969R5 705 aa15.08■□□□□ 0
PRAMEF13-202ENST00000638454 SPHKAPQ2M3C7 1700 aa15.07■□□□□ 0
PRAMEF13-202ENST00000638454 TSHZ2Q9NRE2 1034 aa15.07■□□□□ 0
PRAMEF13-202ENST00000638454 ABCC3O15438 1527 aa15.07■□□□□ 0
PRAMEF13-202ENST00000638454 CEP152O94986 1710 aa15.06■□□□□ 0
PRAMEF13-202ENST00000638454 COL17A1Q9UMD9 1497 aaPredicted RBP15.06■□□□□ 0
PRAMEF13-202ENST00000638454 ESF1Q9H501 851 aaKnown RBP15.06■□□□□ 0
PRAMEF13-202ENST00000638454 PTPRTO14522 1441 aa15.06■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms