RNA–Protein interactions for RNA: ENST00000637842.1

RBMS3-220, Transcript of RNA binding motif single stranded interacting protein 3, humanhuman

TSL 5

Gene RBMS3, Length 1,458 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBMS3-220ENST00000637842 DEPDC5O75140 1603 aa15.31■□□□□ 0.04
RBMS3-220ENST00000637842 PLXNC1O60486 1568 aa15.3■□□□□ 0.04
RBMS3-220ENST00000637842 SYNMO15061 1565 aa15.3■□□□□ 0.04
RBMS3-220ENST00000637842 SETD1AO15047 1707 aaKnown RBP15.3■□□□□ 0.04
RBMS3-220ENST00000637842 ATP7AQ04656 1500 aa15.29■□□□□ 0.04
RBMS3-220ENST00000637842 MIA2Q96PC5 1412 aa15.29■□□□□ 0.04
RBMS3-220ENST00000637842 UGGT1Q9NYU2 1555 aa15.28■□□□□ 0.04
RBMS3-220ENST00000637842 NLRP1Q9C000 1473 aa15.28■□□□□ 0.04
RBMS3-220ENST00000637842 ZNF772Q68DY9 489 aaPredicted RBP15.27■□□□□ 0.03
RBMS3-220ENST00000637842 TRIM52Q96A61 297 aa15.27■□□□□ 0.03
RBMS3-220ENST00000637842 KIAA1107Q9UPP5 1409 aa15.26■□□□□ 0.03
RBMS3-220ENST00000637842 IQGAP1P46940 1657 aa15.26■□□□□ 0.03
RBMS3-220ENST00000637842 PZPP20742 1482 aa15.26■□□□□ 0.03
RBMS3-220ENST00000637842 STRCP1A6NGW2 1772 aa15.26■□□□□ 0.03
RBMS3-220ENST00000637842 WASHC2CQ9Y4E1 1318 aa15.26■□□□□ 0.03
RBMS3-220ENST00000637842 SRCAPQ6ZRS2 3230 aa15.25■□□□□ 0.03
RBMS3-220ENST00000637842 EEA1Q15075 1411 aa15.25■□□□□ 0.03
RBMS3-220ENST00000637842 SYCP2Q9BX26 1530 aa15.25■□□□□ 0.03
RBMS3-220ENST00000637842 PLEKHH2Q8IVE3 1493 aa15.23■□□□□ 0.03
RBMS3-220ENST00000637842 KIF3BO15066 747 aa15.22■□□□□ 0.03
RBMS3-220ENST00000637842 CFDP1Q9UEE9 299 aaPredicted RBP15.22■□□□□ 0.03
RBMS3-220ENST00000637842 DHX29Q7Z478 1369 aaKnown RBP15.21■□□□□ 0.03
RBMS3-220ENST00000637842 JCADQ9P266 1359 aa15.21■□□□□ 0.03
RBMS3-220ENST00000637842 INO80Q9ULG1 1556 aaPredicted RBP15.21■□□□□ 0.02
RBMS3-220ENST00000637842 RXRBP28702 533 aa15.2■□□□□ 0.02
RBMS3-220ENST00000637842 KDM5DQ9BY66 1539 aa15.2■□□□□ 0.02
RBMS3-220ENST00000637842 EHMT2Q96KQ7 1210 aa15.2■□□□□ 0.02
RBMS3-220ENST00000637842 UBTFP17480 764 aaKnown RBP15.19■□□□□ 0.02
RBMS3-220ENST00000637842 MEX3CQ5U5Q3 659 aaKnown RBP15.19■□□□□ 0.02
RBMS3-220ENST00000637842 CDC42BPAQ5VT25 1732 aa15.19■□□□□ 0.02
RBMS3-220ENST00000637842 GPATCH8Q9UKJ3 1502 aaKnown RBP15.18■□□□□ 0.02
RBMS3-220ENST00000637842 ARHGAP35Q9NRY4 1499 aa15.18■□□□□ 0.02
RBMS3-220ENST00000637842 FOXD1Q16676 465 aa15.18■□□□□ 0.02
RBMS3-220ENST00000637842 ADGBQ8N7X0 1667 aa15.17■□□□□ 0.02
RBMS3-220ENST00000637842 TXNDC2Q86VQ3 553 aa15.16■□□□□ 0.02
RBMS3-220ENST00000637842 CCDC18Q5T9S5 1454 aa15.16■□□□□ 0.02
RBMS3-220ENST00000637842 TMEM94Q12767 1356 aa15.16■□□□□ 0.02
RBMS3-220ENST00000637842 SPATA31A6Q5VVP1 1343 aa15.16■□□□□ 0.02
RBMS3-220ENST00000637842 RTEL1-TNFRSF6BF6WH68 1400 aa15.14■□□□□ 0.01
RBMS3-220ENST00000637842 PROSER2Q86WR7 435 aaPredicted RBP15.14■□□□□ 0.01
RBMS3-220ENST00000637842 ROBO1Q9Y6N7 1651 aa15.13■□□□□ 0.01
RBMS3-220ENST00000637842 LRRC9Q6ZRR7 1453 aa15.13■□□□□ 0.01
RBMS3-220ENST00000637842 SCAF11Q99590 1463 aaKnown RBP15.13■□□□□ 0.01
RBMS3-220ENST00000637842 LTKP29376 864 aa15.13■□□□□ 0.01
RBMS3-220ENST00000637842 SLAIN2Q9P270 581 aa15.13■□□□□ 0.01
RBMS3-220ENST00000637842 EID1Q9Y6B2 187 aa15.13■□□□□ 0.01
RBMS3-220ENST00000637842 KCNA6P17658 529 aa15.12■□□□□ 0.01
RBMS3-220ENST00000637842 ZRANB1Q9UGI0 708 aa15.12■□□□□ 0.01
RBMS3-220ENST00000637842 LRRIQ1Q96JM4 1722 aa15.12■□□□□ 0.01
RBMS3-220ENST00000637842 CDK12Q9NYV4 1490 aaPredicted RBP15.12■□□□□ 0.01
RBMS3-220ENST00000637842 ZC3H13Q5T200 1668 aaKnown RBP15.11■□□□□ 0.01
RBMS3-220ENST00000637842 XIRP1Q702N8 1843 aaKnown RBP15.11■□□□□ 0.01
RBMS3-220ENST00000637842 CCNB3Q8WWL7 1395 aa15.11■□□□□ 0.01
RBMS3-220ENST00000637842 CASKIN1Q8WXD9 1431 aa15.1■□□□□ 0.01
RBMS3-220ENST00000637842 RBM33Q96EV2 1170 aaKnown RBP15.08■□□□□ 0
RBMS3-220ENST00000637842 FGD6Q6ZV73 1430 aa15.07■□□□□ 0
RBMS3-220ENST00000637842 ZNF644Q9H582 1327 aaPredicted RBP15.07■□□□□ 0
RBMS3-220ENST00000637842 MSH6P52701 1360 aa15.07■□□□□ 0
RBMS3-220ENST00000637842 LRP6O75581 1613 aa15.06■□□□□ 0
RBMS3-220ENST00000637842 PHLPP1O60346 1717 aa15.06■□□□□ 0
RBMS3-220ENST00000637842 MBD5Q9P267 1494 aa15.06■□□□□ 0
RBMS3-220ENST00000637842 ARHGAP23Q9P227 1491 aa15.05■□□□□ -0
RBMS3-220ENST00000637842 NUTM2BA6NNL0 878 aaPredicted RBP15.04■□□□□ -0
RBMS3-220ENST00000637842 NUTM2EB1AL46 878 aaPredicted RBP15.04■□□□□ -0
RBMS3-220ENST00000637842 NUTM2DQ5VT03 806 aaPredicted RBP15.04■□□□□ -0
RBMS3-220ENST00000637842 NUTM2AQ8IVF1 878 aaPredicted RBP15.04■□□□□ -0
RBMS3-220ENST00000637842 SLIT1O75093 1534 aa15.03■□□□□ -0
RBMS3-220ENST00000637842 RSPH4AQ5TD94 716 aa15.03■□□□□ -0
RBMS3-220ENST00000637842 ERVK-7P63135 1459 aa15.02□□□□□ -0.01
RBMS3-220ENST00000637842 NCOA2Q15596 1464 aa15.02□□□□□ -0.01
RBMS3-220ENST00000637842 MAP3K1Q13233 1512 aa15.02□□□□□ -0.01
RBMS3-220ENST00000637842 RBM6P78332 1123 aaKnown RBP15.01□□□□□ -0.01
RBMS3-220ENST00000637842 PRDM15P57071 1507 aaPredicted RBP15□□□□□ -0.01
RBMS3-220ENST00000637842 SLC26A8Q96RN1 970 aa15□□□□□ -0.01
RBMS3-220ENST00000637842 QTRT2Q9H974 415 aaKnown RBP15□□□□□ -0.01
RBMS3-220ENST00000637842 AFF2P51816 1311 aa15□□□□□ -0.01
RBMS3-220ENST00000637842 UBR1Q8IWV7 1749 aa15□□□□□ -0.01
RBMS3-220ENST00000637842 STAG3Q9UJ98 1225 aa14.99□□□□□ -0.01
RBMS3-220ENST00000637842 COL16A1Q07092 1604 aaPredicted RBP14.98□□□□□ -0.01
RBMS3-220ENST00000637842 TMEM2Q9UHN6 1383 aa14.98□□□□□ -0.01
RBMS3-220ENST00000637842 ATAD2Q6PL18 1390 aa14.96□□□□□ -0.01
RBMS3-220ENST00000637842 TSPY4P0CV99 314 aa14.96□□□□□ -0.01
RBMS3-220ENST00000637842 TSPY10P0CW01 314 aa14.96□□□□□ -0.01
RBMS3-220ENST00000637842 NGLY1Q96IV0 654 aa14.96□□□□□ -0.01
RBMS3-220ENST00000637842 ABCC3O15438 1527 aa14.96□□□□□ -0.01
RBMS3-220ENST00000637842 NKTRP30414 1462 aaKnown RBP14.96□□□□□ -0.01
RBMS3-220ENST00000637842 RGS12O14924 1447 aa14.96□□□□□ -0.01
RBMS3-220ENST00000637842 FYCO1Q9BQS8 1478 aa14.95□□□□□ -0.02
RBMS3-220ENST00000637842 MTUS2Q5JR59 1369 aa14.95□□□□□ -0.02
RBMS3-220ENST00000637842 CCDC141Q6ZP82 1450 aa14.94□□□□□ -0.02
RBMS3-220ENST00000637842 CCDC125Q86Z20 511 aa14.94□□□□□ -0.02
RBMS3-220ENST00000637842 TIAM1Q13009 1591 aa14.93□□□□□ -0.02
RBMS3-220ENST00000637842 SETBP1Q9Y6X0 1596 aa14.93□□□□□ -0.02
RBMS3-220ENST00000637842 BCANQ96GW7 911 aa14.93□□□□□ -0.02
RBMS3-220ENST00000637842 CADPS2Q86UW7 1296 aa14.92□□□□□ -0.02
RBMS3-220ENST00000637842 C14orf37Q86TY3 774 aa14.91□□□□□ -0.02
RBMS3-220ENST00000637842 SHPRHQ149N8 1683 aa14.9□□□□□ -0.02
RBMS3-220ENST00000637842 C8orf37Q96NL8 207 aa14.9□□□□□ -0.02
RBMS3-220ENST00000637842 TET3O43151 1660 aa14.9□□□□□ -0.02
RBMS3-220ENST00000637842 NCOA3Q9Y6Q9 1424 aa14.9□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms