RNA–Protein interactions for RNA: ENST00000637828.1

CACNB4-264, Transcript of calcium voltage-gated channel auxiliary subunit beta 4, humanhuman

TSL 5

Gene CACNB4, Length 1,831 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB4-264ENST00000637828 BCORL1Q5H9F3 1711 aa13.16□□□□□ -0.3
CACNB4-264ENST00000637828 PCGF6Q9BYE7 350 aa13.15□□□□□ -0.3
CACNB4-264ENST00000637828 FAM135AQ9P2D6 1515 aa13.14□□□□□ -0.31
CACNB4-264ENST00000637828 KIF3BO15066 747 aa13.11□□□□□ -0.31
CACNB4-264ENST00000637828 RAB3GAP2Q9H2M9 1393 aa13.11□□□□□ -0.31
CACNB4-264ENST00000637828 RNF17Q9BXT8 1623 aaKnown RBP13.1□□□□□ -0.31
CACNB4-264ENST00000637828 KANK1Q14678 1352 aa13.1□□□□□ -0.31
CACNB4-264ENST00000637828 DEPDC5O75140 1603 aa13.08□□□□□ -0.31
CACNB4-264ENST00000637828 PRDM15P57071 1507 aaPredicted RBP13.08□□□□□ -0.31
CACNB4-264ENST00000637828 ARID4BQ4LE39 1312 aaPredicted RBP13.08□□□□□ -0.32
CACNB4-264ENST00000637828 KDM5DQ9BY66 1539 aa13.08□□□□□ -0.32
CACNB4-264ENST00000637828 UNC13BO14795 1591 aa13.08□□□□□ -0.32
CACNB4-264ENST00000637828 CNTLNQ9NXG0 1405 aa13.06□□□□□ -0.32
CACNB4-264ENST00000637828 NUP155O75694 1391 aa13.06□□□□□ -0.32
CACNB4-264ENST00000637828 LMTK2Q8IWU2 1503 aa13.05□□□□□ -0.32
CACNB4-264ENST00000637828 VWDEQ8N2E2 1590 aa13.05□□□□□ -0.32
CACNB4-264ENST00000637828 GGT6Q6P531 493 aa13.05□□□□□ -0.32
CACNB4-264ENST00000637828 PIAS4Q8N2W9 510 aaPredicted RBP13.04□□□□□ -0.32
CACNB4-264ENST00000637828 TRIM52Q96A61 297 aa13.04□□□□□ -0.32
CACNB4-264ENST00000637828 ESF1Q9H501 851 aaKnown RBP13.04□□□□□ -0.32
CACNB4-264ENST00000637828 WASHC2CQ9Y4E1 1318 aa13.04□□□□□ -0.32
CACNB4-264ENST00000637828 MROH1Q8NDA8 1641 aa13.03□□□□□ -0.32
CACNB4-264ENST00000637828 ZC3H13Q5T200 1668 aaKnown RBP13.03□□□□□ -0.32
CACNB4-264ENST00000637828 IQGAP3Q86VI3 1631 aa13.02□□□□□ -0.32
CACNB4-264ENST00000637828 MSH5O43196 834 aa13.02□□□□□ -0.32
CACNB4-264ENST00000637828 ARHGAP31Q2M1Z3 1444 aa13.02□□□□□ -0.33
CACNB4-264ENST00000637828 ADRA2BP18089 450 aa13.02□□□□□ -0.33
CACNB4-264ENST00000637828 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.01□□□□□ -0.336e-7■■■■■ 26.8
CACNB4-264ENST00000637828 RPRD2Q5VT52 1461 aaKnown RBP13.01□□□□□ -0.33
CACNB4-264ENST00000637828 SIGLEC1Q9BZZ2 1709 aa13.01□□□□□ -0.33
CACNB4-264ENST00000637828 ABCC3O15438 1527 aa13□□□□□ -0.33
CACNB4-264ENST00000637828 SLC4A1APQ9BWU0 796 aaKnown RBP13□□□□□ -0.33
CACNB4-264ENST00000637828 MPHOSPH9Q99550 1183 aa12.99□□□□□ -0.33
CACNB4-264ENST00000637828 PZPP20742 1482 aa12.99□□□□□ -0.33
CACNB4-264ENST00000637828 MLECQ14165 292 aa12.98□□□□□ -0.33
CACNB4-264ENST00000637828 TET3O43151 1660 aa12.98□□□□□ -0.33
CACNB4-264ENST00000637828 ADAMTSL3P82987 1691 aa12.97□□□□□ -0.33
CACNB4-264ENST00000637828 CLSPNQ9HAW4 1339 aa12.97□□□□□ -0.33
CACNB4-264ENST00000637828 EFCAB6Q5THR3 1501 aa12.97□□□□□ -0.33
CACNB4-264ENST00000637828 MROH2AA6NES4 1674 aa12.97□□□□□ -0.33
CACNB4-264ENST00000637828 ZMYM3Q14202 1370 aa12.96□□□□□ -0.34
CACNB4-264ENST00000637828 PKD2Q13563 968 aa12.95□□□□□ -0.34
CACNB4-264ENST00000637828 DHX57Q6P158 1386 aaKnown RBP12.94□□□□□ -0.34
CACNB4-264ENST00000637828 NPATQ14207 1427 aa12.93□□□□□ -0.34
CACNB4-264ENST00000637828 CAMSAP1Q5T5Y3 1602 aa12.93□□□□□ -0.34
CACNB4-264ENST00000637828 FER1L4A9Z1Z3 1794 aa12.93□□□□□ -0.34
CACNB4-264ENST00000637828 PTPRTO14522 1441 aa12.92□□□□□ -0.34
CACNB4-264ENST00000637828 CLTCQ00610 1675 aaKnown RBP12.91□□□□□ -0.34
CACNB4-264ENST00000637828 MADDQ8WXG6 1647 aa12.91□□□□□ -0.34
CACNB4-264ENST00000637828 NOS1P29475 1434 aa12.91□□□□□ -0.34
CACNB4-264ENST00000637828 CEP152O94986 1710 aa12.9□□□□□ -0.34
CACNB4-264ENST00000637828 SLC52A1Q9NWF4 448 aa12.9□□□□□ -0.34
CACNB4-264ENST00000637828 ANKRD30BQ9BXX2 1392 aa12.89□□□□□ -0.35
CACNB4-264ENST00000637828 SPATA31D1Q6ZQQ2 1576 aa12.89□□□□□ -0.35
CACNB4-264ENST00000637828 E9PCH4 1651 aa12.89□□□□□ -0.35
CACNB4-264ENST00000637828 PTPRMP28827 1452 aa12.88□□□□□ -0.35
CACNB4-264ENST00000637828 ERVK-7P63135 1459 aa12.88□□□□□ -0.35
CACNB4-264ENST00000637828 TRPM2O94759 1503 aa12.87□□□□□ -0.35
CACNB4-264ENST00000637828 KDM4FA0A1W2PPD8 638 aa12.87□□□□□ -0.35
CACNB4-264ENST00000637828 RIMS1Q86UR5 1692 aaKnown RBP12.86□□□□□ -0.35
CACNB4-264ENST00000637828 CCDC144AA2RUR9 1427 aa12.86□□□□□ -0.35
CACNB4-264ENST00000637828 CCER1Q8TC90 406 aaPredicted RBP12.85□□□□□ -0.35
CACNB4-264ENST00000637828 C3P01024 1663 aa12.85□□□□□ -0.35
CACNB4-264ENST00000637828 TNRQ92752 1358 aa12.85□□□□□ -0.35
CACNB4-264ENST00000637828 PLA2R1Q13018 1463 aa12.85□□□□□ -0.35
CACNB4-264ENST00000637828 NLRP1Q9C000 1473 aa12.85□□□□□ -0.35
CACNB4-264ENST00000637828 PREX1Q8TCU6 1659 aa12.84□□□□□ -0.35
CACNB4-264ENST00000637828 SPHKAPQ2M3C7 1700 aa12.84□□□□□ -0.35
CACNB4-264ENST00000637828 FBXO31Q5XUX0 539 aaPredicted RBP12.83□□□□□ -0.35
CACNB4-264ENST00000637828 TIMELESSQ9UNS1 1208 aa12.83□□□□□ -0.35
CACNB4-264ENST00000637828 NEURL4Q96JN8 1562 aa12.83□□□□□ -0.36
CACNB4-264ENST00000637828 SETD1BQ9UPS6 1966 aaKnown RBP12.83□□□□□ -0.36
CACNB4-264ENST00000637828 CEBPAP49715 358 aaPredicted RBP12.82□□□□□ -0.36
CACNB4-264ENST00000637828 STAC3Q96MF2 364 aa12.81□□□□□ -0.36
CACNB4-264ENST00000637828 PIK3C2BO00750 1634 aa12.81□□□□□ -0.36
CACNB4-264ENST00000637828 SYNMO15061 1565 aa12.8□□□□□ -0.36
CACNB4-264ENST00000637828 IDI1Q13907 227 aa12.8□□□□□ -0.36
CACNB4-264ENST00000637828 KDM5AP29375 1690 aaKnown RBP12.79□□□□□ -0.36
CACNB4-264ENST00000637828 RPGRIP1LQ68CZ1 1315 aa12.78□□□□□ -0.36
CACNB4-264ENST00000637828 A2ML1A8K2U0 1454 aa12.78□□□□□ -0.36
CACNB4-264ENST00000637828 UHRF1BP1Q6BDS2 1440 aa12.78□□□□□ -0.36
CACNB4-264ENST00000637828 HDGFP51858 240 aaKnown RBP12.77□□□□□ -0.37
CACNB4-264ENST00000637828 SPATA31E1Q6ZUB1 1445 aa12.76□□□□□ -0.37
CACNB4-264ENST00000637828 THEMISQ8N1K5 641 aaPredicted RBP12.76□□□□□ -0.37
CACNB4-264ENST00000637828 CLTCL1P53675 1640 aa12.76□□□□□ -0.37
CACNB4-264ENST00000637828 STAG3Q9UJ98 1225 aa12.76□□□□□ -0.37
CACNB4-264ENST00000637828 ADGRB3O60242 1522 aa12.75□□□□□ -0.37
CACNB4-264ENST00000637828 MYO3AQ8NEV4 1616 aa12.74□□□□□ -0.37
CACNB4-264ENST00000637828 UGGT1Q9NYU2 1555 aa12.74□□□□□ -0.37
CACNB4-264ENST00000637828 ZNF142P52746 1687 aaPredicted RBP12.74□□□□□ -0.37
CACNB4-264ENST00000637828 CEP170BQ9Y4F5 1589 aaPredicted RBP12.74□□□□□ -0.37
CACNB4-264ENST00000637828 CFAP65Q6ZU64 1925 aaKnown RBP12.73□□□□□ -0.37
CACNB4-264ENST00000637828 ABCF1Q8NE71 845 aaKnown RBP eCLIP12.73□□□□□ -0.37
CACNB4-264ENST00000637828 TMEM131LA2VDJ0 1609 aa12.73□□□□□ -0.37
CACNB4-264ENST00000637828 KIF1BO60333 1816 aa12.72□□□□□ -0.37
CACNB4-264ENST00000637828 TONSLQ96HA7 1378 aa12.72□□□□□ -0.37
CACNB4-264ENST00000637828 SIN3AQ96ST3 1273 aa12.72□□□□□ -0.37
CACNB4-264ENST00000637828 ZEB1P37275 1124 aaPredicted RBP12.72□□□□□ -0.37
CACNB4-264ENST00000637828 ZFYVE9O95405 1425 aa12.71□□□□□ -0.37
CACNB4-264ENST00000637828 TMEM2Q9UHN6 1383 aa12.71□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 9.8 ms