RNA–Protein interactions for RNA: ENST00000637692.1

CACNA1A-245, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 5

Gene CACNA1A, Length 1,245 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-245ENST00000637692 FAM135AQ9P2D6 1515 aa22.16■■□□□ 1.14
CACNA1A-245ENST00000637692 DEPDC5O75140 1603 aa22.15■■□□□ 1.14
CACNA1A-245ENST00000637692 UNC13BO14795 1591 aa22.14■■□□□ 1.13
CACNA1A-245ENST00000637692 PRDM15P57071 1507 aaPredicted RBP22.13■■□□□ 1.13
CACNA1A-245ENST00000637692 ARID4BQ4LE39 1312 aaPredicted RBP22.12■■□□□ 1.13
CACNA1A-245ENST00000637692 KANK1Q14678 1352 aa22.12■■□□□ 1.13
CACNA1A-245ENST00000637692 SIGLEC1Q9BZZ2 1709 aa22.1■■□□□ 1.13
CACNA1A-245ENST00000637692 KDM5DQ9BY66 1539 aa22.1■■□□□ 1.13
CACNA1A-245ENST00000637692 MROH1Q8NDA8 1641 aa22.09■■□□□ 1.13
CACNA1A-245ENST00000637692 VWDEQ8N2E2 1590 aa22.08■■□□□ 1.12
CACNA1A-245ENST00000637692 GGT6Q6P531 493 aa22.07■■□□□ 1.12
CACNA1A-245ENST00000637692 NUP155O75694 1391 aa22.07■■□□□ 1.12
CACNA1A-245ENST00000637692 LMTK2Q8IWU2 1503 aa22.05■■□□□ 1.12
CACNA1A-245ENST00000637692 CNTLNQ9NXG0 1405 aa22.05■■□□□ 1.12
CACNA1A-245ENST00000637692 TRIM52Q96A61 297 aa22.04■■□□□ 1.12
CACNA1A-245ENST00000637692 IQGAP3Q86VI3 1631 aa22.04■■□□□ 1.12
CACNA1A-245ENST00000637692 ZC3H13Q5T200 1668 aaKnown RBP22.04■■□□□ 1.12
CACNA1A-245ENST00000637692 GRWD1Q9BQ67 446 aaKnown RBP eCLIP22.03■■□□□ 1.12
CACNA1A-245ENST00000637692 WASHC2CQ9Y4E1 1318 aa22.02■■□□□ 1.12
CACNA1A-245ENST00000637692 ABCC3O15438 1527 aa22.01■■□□□ 1.11
CACNA1A-245ENST00000637692 ESF1Q9H501 851 aaKnown RBP22■■□□□ 1.11
CACNA1A-245ENST00000637692 PZPP20742 1482 aa21.99■■□□□ 1.11
CACNA1A-245ENST00000637692 MLECQ14165 292 aa21.99■■□□□ 1.11
CACNA1A-245ENST00000637692 ARHGAP31Q2M1Z3 1444 aa21.97■■□□□ 1.11
CACNA1A-245ENST00000637692 TET3O43151 1660 aa21.96■■□□□ 1.11
CACNA1A-245ENST00000637692 ADAMTSL3P82987 1691 aa21.96■■□□□ 1.11
CACNA1A-245ENST00000637692 SLC4A1APQ9BWU0 796 aaKnown RBP21.96■■□□□ 1.11
CACNA1A-245ENST00000637692 MPHOSPH9Q99550 1183 aa21.95■■□□□ 1.1
CACNA1A-245ENST00000637692 RPRD2Q5VT52 1461 aaKnown RBP21.95■■□□□ 1.1
CACNA1A-245ENST00000637692 EFCAB6Q5THR3 1501 aa21.95■■□□□ 1.1
CACNA1A-245ENST00000637692 MROH2AA6NES4 1674 aa21.94■■□□□ 1.1
CACNA1A-245ENST00000637692 CAMSAP1Q5T5Y3 1602 aa21.91■■□□□ 1.1
CACNA1A-245ENST00000637692 FER1L4A9Z1Z3 1794 aa21.91■■□□□ 1.1
CACNA1A-245ENST00000637692 CEP152O94986 1710 aa21.9■■□□□ 1.1
CACNA1A-245ENST00000637692 CLTCQ00610 1675 aaKnown RBP21.9■■□□□ 1.1
CACNA1A-245ENST00000637692 MADDQ8WXG6 1647 aa21.89■■□□□ 1.09
CACNA1A-245ENST00000637692 PKD2Q13563 968 aa21.89■■□□□ 1.09
CACNA1A-245ENST00000637692 ZMYM3Q14202 1370 aa21.88■■□□□ 1.09
CACNA1A-245ENST00000637692 DHX57Q6P158 1386 aaKnown RBP21.88■■□□□ 1.09
CACNA1A-245ENST00000637692 NPATQ14207 1427 aa21.88■■□□□ 1.09
CACNA1A-245ENST00000637692 E9PCH4 1651 aa21.83■■□□□ 1.09
CACNA1A-245ENST00000637692 CLSPNQ9HAW4 1339 aa21.82■■□□□ 1.08
CACNA1A-245ENST00000637692 PTPRTO14522 1441 aa21.82■■□□□ 1.08
CACNA1A-245ENST00000637692 RIMS1Q86UR5 1692 aaKnown RBP21.82■■□□□ 1.08
CACNA1A-245ENST00000637692 NOS1P29475 1434 aa21.81■■□□□ 1.08
CACNA1A-245ENST00000637692 PTPRMP28827 1452 aa21.8■■□□□ 1.08
CACNA1A-245ENST00000637692 ERVK-7P63135 1459 aa21.8■■□□□ 1.08
CACNA1A-245ENST00000637692 SPATA31D1Q6ZQQ2 1576 aa21.79■■□□□ 1.08
CACNA1A-245ENST00000637692 KDM4FA0A1W2PPD8 638 aa21.78■■□□□ 1.08
CACNA1A-245ENST00000637692 TRPM2O94759 1503 aa21.78■■□□□ 1.08
CACNA1A-245ENST00000637692 C3P01024 1663 aa21.78■■□□□ 1.08
CACNA1A-245ENST00000637692 ANKRD30BQ9BXX2 1392 aa21.77■■□□□ 1.08
CACNA1A-245ENST00000637692 PREX1Q8TCU6 1659 aa21.75■■□□□ 1.07
CACNA1A-245ENST00000637692 PLA2R1Q13018 1463 aa21.75■■□□□ 1.07
CACNA1A-245ENST00000637692 SPHKAPQ2M3C7 1700 aa21.75■■□□□ 1.07
CACNA1A-245ENST00000637692 SLC52A1Q9NWF4 448 aa21.74■■□□□ 1.07
CACNA1A-245ENST00000637692 TNRQ92752 1358 aa21.74■■□□□ 1.07
CACNA1A-245ENST00000637692 FOXD1Q16676 465 aa21.73■■□□□ 1.07
CACNA1A-245ENST00000637692 FBXO31Q5XUX0 539 aaPredicted RBP21.73■■□□□ 1.07
CACNA1A-245ENST00000637692 CCER1Q8TC90 406 aaPredicted RBP21.73■■□□□ 1.07
CACNA1A-245ENST00000637692 CCDC144AA2RUR9 1427 aa21.72■■□□□ 1.07
CACNA1A-245ENST00000637692 CEBPAP49715 358 aaPredicted RBP21.71■■□□□ 1.07
CACNA1A-245ENST00000637692 SYNMO15061 1565 aa21.7■■□□□ 1.06
CACNA1A-245ENST00000637692 NLRP1Q9C000 1473 aa21.7■■□□□ 1.06
CACNA1A-245ENST00000637692 PIK3C2BO00750 1634 aa21.68■■□□□ 1.06
CACNA1A-245ENST00000637692 NEURL4Q96JN8 1562 aa21.65■■□□□ 1.06
CACNA1A-245ENST00000637692 CLTCL1P53675 1640 aa21.63■■□□□ 1.05
CACNA1A-245ENST00000637692 IDI1Q13907 227 aa21.63■■□□□ 1.05
CACNA1A-245ENST00000637692 KDM5AP29375 1690 aaKnown RBP21.61■■□□□ 1.05
CACNA1A-245ENST00000637692 SETD1BQ9UPS6 1966 aaKnown RBP21.61■■□□□ 1.05
CACNA1A-245ENST00000637692 A2ML1A8K2U0 1454 aa21.6■■□□□ 1.05
CACNA1A-245ENST00000637692 MYO3AQ8NEV4 1616 aa21.6■■□□□ 1.05
CACNA1A-245ENST00000637692 PLPPR3Q6T4P5 718 aa21.6■■□□□ 1.05
CACNA1A-245ENST00000637692 UHRF1BP1Q6BDS2 1440 aa21.6■■□□□ 1.05
CACNA1A-245ENST00000637692 UGGT1Q9NYU2 1555 aa21.6■■□□□ 1.05
CACNA1A-245ENST00000637692 ADGRB3O60242 1522 aa21.59■■□□□ 1.05
CACNA1A-245ENST00000637692 SPATA31E1Q6ZUB1 1445 aa21.58■■□□□ 1.05
CACNA1A-245ENST00000637692 CFAP65Q6ZU64 1925 aaKnown RBP21.58■■□□□ 1.04
CACNA1A-245ENST00000637692 TIMELESSQ9UNS1 1208 aa21.57■■□□□ 1.04
CACNA1A-245ENST00000637692 CEP170BQ9Y4F5 1589 aaPredicted RBP21.57■■□□□ 1.04
CACNA1A-245ENST00000637692 ZNF142P52746 1687 aaPredicted RBP21.56■■□□□ 1.04
CACNA1A-245ENST00000637692 SIN3AQ96ST3 1273 aa21.55■■□□□ 1.04
CACNA1A-245ENST00000637692 STAG3Q9UJ98 1225 aa21.55■■□□□ 1.04
CACNA1A-245ENST00000637692 TMEM131LA2VDJ0 1609 aa21.55■■□□□ 1.04
CACNA1A-245ENST00000637692 KIF1BO60333 1816 aa21.54■■□□□ 1.04
CACNA1A-245ENST00000637692 THEMISQ8N1K5 641 aaPredicted RBP21.53■■□□□ 1.04
CACNA1A-245ENST00000637692 STAC3Q96MF2 364 aa21.53■■□□□ 1.04
CACNA1A-245ENST00000637692 RPGRIP1LQ68CZ1 1315 aa21.53■■□□□ 1.04
CACNA1A-245ENST00000637692 NEUROD1Q13562 356 aa21.51■■□□□ 1.03
CACNA1A-245ENST00000637692 UBR1Q8IWV7 1749 aa21.51■■□□□ 1.03
CACNA1A-245ENST00000637692 CHGAP10645 457 aaKnown RBP21.5■■□□□ 1.03
CACNA1A-245ENST00000637692 TONSLQ96HA7 1378 aa21.49■■□□□ 1.03
CACNA1A-245ENST00000637692 HDGFP51858 240 aaKnown RBP21.48■■□□□ 1.03
CACNA1A-245ENST00000637692 TMEM2Q9UHN6 1383 aa21.48■■□□□ 1.03
CACNA1A-245ENST00000637692 SLIT1O75093 1534 aa21.47■■□□□ 1.03
CACNA1A-245ENST00000637692 ARHGAP23Q9P227 1491 aa21.46■■□□□ 1.03
CACNA1A-245ENST00000637692 ZNF326Q5BKZ1 582 aaKnown RBP21.46■■□□□ 1.03
CACNA1A-245ENST00000637692 ABCF1Q8NE71 845 aaKnown RBP eCLIP21.46■■□□□ 1.03
CACNA1A-245ENST00000637692 RGL3Q3MIN7 710 aa21.45■■□□□ 1.02
CACNA1A-245ENST00000637692 ZFYVE9O95405 1425 aa21.45■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms