RNA–Protein interactions for RNA: ENST00000636540.1

SRP54-AS1-205, Transcript of SRP54 antisense RNA 1 (head to head), humanhuman

BASIC

Gene SRP54-AS1, Length 565 nt, Biotype transcribed unitary pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-AS1-205ENST00000636540 TSPY10P0CW01 314 aa17.26■□□□□ 0.35
SRP54-AS1-205ENST00000636540 ADGRL2O95490 1459 aa17.25■□□□□ 0.35
SRP54-AS1-205ENST00000636540 DEPDC5O75140 1603 aa17.25■□□□□ 0.35
SRP54-AS1-205ENST00000636540 ERBINQ96RT1 1412 aa17.23■□□□□ 0.35
SRP54-AS1-205ENST00000636540 PRDM15P57071 1507 aaPredicted RBP17.23■□□□□ 0.35
SRP54-AS1-205ENST00000636540 KIF15Q9NS87 1388 aa17.23■□□□□ 0.35
SRP54-AS1-205ENST00000636540 ZNF142P52746 1687 aaPredicted RBP17.23■□□□□ 0.35
SRP54-AS1-205ENST00000636540 MYO3AQ8NEV4 1616 aa17.22■□□□□ 0.35
SRP54-AS1-205ENST00000636540 SETD1BQ9UPS6 1966 aaKnown RBP17.22■□□□□ 0.35
SRP54-AS1-205ENST00000636540 CEP152O94986 1710 aa17.21■□□□□ 0.35
SRP54-AS1-205ENST00000636540 NPATQ14207 1427 aa17.21■□□□□ 0.34
SRP54-AS1-205ENST00000636540 CEBPAP49715 358 aaPredicted RBP17.19■□□□□ 0.34
SRP54-AS1-205ENST00000636540 ESF1Q9H501 851 aaKnown RBP17.19■□□□□ 0.34
SRP54-AS1-205ENST00000636540 ABCC3O15438 1527 aa17.19■□□□□ 0.34
SRP54-AS1-205ENST00000636540 CAMSAP1Q5T5Y3 1602 aa17.18■□□□□ 0.34
SRP54-AS1-205ENST00000636540 KIF3BO15066 747 aa17.18■□□□□ 0.34
SRP54-AS1-205ENST00000636540 GGT6Q6P531 493 aa17.18■□□□□ 0.34
SRP54-AS1-205ENST00000636540 UHRF1BP1Q6BDS2 1440 aa17.18■□□□□ 0.34
SRP54-AS1-205ENST00000636540 NCOA1Q15788 1441 aa17.17■□□□□ 0.34
SRP54-AS1-205ENST00000636540 PZPP20742 1482 aa17.17■□□□□ 0.34
SRP54-AS1-205ENST00000636540 ZMYM3Q14202 1370 aa17.16■□□□□ 0.34
SRP54-AS1-205ENST00000636540 ANKRD30AQ9BXX3 1397 aa17.16■□□□□ 0.34
SRP54-AS1-205ENST00000636540 PTPRKQ15262 1439 aa17.16■□□□□ 0.34
SRP54-AS1-205ENST00000636540 FAM50AQ14320 339 aaKnown RBP17.16■□□□□ 0.34
SRP54-AS1-205ENST00000636540 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP17.15■□□□□ 0.34
SRP54-AS1-205ENST00000636540 RRBP1Q9P2E9 1410 aaKnown RBP17.15■□□□□ 0.34
SRP54-AS1-205ENST00000636540 PPARGC1BQ86YN6 1023 aaKnown RBP17.14■□□□□ 0.33
SRP54-AS1-205ENST00000636540 VWDEQ8N2E2 1590 aa17.14■□□□□ 0.33
SRP54-AS1-205ENST00000636540 CEP170BQ9Y4F5 1589 aaPredicted RBP17.13■□□□□ 0.33
SRP54-AS1-205ENST00000636540 UNC13BO14795 1591 aa17.11■□□□□ 0.33
SRP54-AS1-205ENST00000636540 STRCQ7RTU9 1775 aa17.11■□□□□ 0.33
SRP54-AS1-205ENST00000636540 RRP7BPQ9NSQ0 103 aa17.11■□□□□ 0.33
SRP54-AS1-205ENST00000636540 CHIC2Q9UKJ5 165 aa17.1■□□□□ 0.33
SRP54-AS1-205ENST00000636540 ROCK1Q13464 1354 aa17.1■□□□□ 0.33
SRP54-AS1-205ENST00000636540 SPATA31D1Q6ZQQ2 1576 aa17.1■□□□□ 0.33
SRP54-AS1-205ENST00000636540 LMTK2Q8IWU2 1503 aa17.09■□□□□ 0.33
SRP54-AS1-205ENST00000636540 GCC2Q8IWJ2 1684 aa17.07■□□□□ 0.32
SRP54-AS1-205ENST00000636540 ANKRD50Q9ULJ7 1429 aa17.07■□□□□ 0.32
SRP54-AS1-205ENST00000636540 WASHC2CQ9Y4E1 1318 aa17.07■□□□□ 0.32
SRP54-AS1-205ENST00000636540 HSPA2P54652 639 aa17.07■□□□□ 0.32
SRP54-AS1-205ENST00000636540 EFCAB6Q5THR3 1501 aa17.06■□□□□ 0.32
SRP54-AS1-205ENST00000636540 ERVK-7P63135 1459 aa17.06■□□□□ 0.32
SRP54-AS1-205ENST00000636540 A2ML1A8K2U0 1454 aa17.05■□□□□ 0.32
SRP54-AS1-205ENST00000636540 ARHGAP31Q2M1Z3 1444 aa17.04■□□□□ 0.32
SRP54-AS1-205ENST00000636540 TET3O43151 1660 aa17.04■□□□□ 0.32
SRP54-AS1-205ENST00000636540 TNRQ92752 1358 aa17.03■□□□□ 0.32
SRP54-AS1-205ENST00000636540 NLRP1Q9C000 1473 aa17.03■□□□□ 0.32
SRP54-AS1-205ENST00000636540 IQGAP3Q86VI3 1631 aa17.03■□□□□ 0.32
SRP54-AS1-205ENST00000636540 POLR1AO95602 1720 aaPredicted RBP17.02■□□□□ 0.32
SRP54-AS1-205ENST00000636540 PLA2R1Q13018 1463 aa17.02■□□□□ 0.32
SRP54-AS1-205ENST00000636540 CFAP65Q6ZU64 1925 aaKnown RBP17.02■□□□□ 0.31
SRP54-AS1-205ENST00000636540 KANK1Q14678 1352 aa17.01■□□□□ 0.31
SRP54-AS1-205ENST00000636540 FBXO31Q5XUX0 539 aaPredicted RBP16.99■□□□□ 0.31
SRP54-AS1-205ENST00000636540 UBR1Q8IWV7 1749 aa16.99■□□□□ 0.31
SRP54-AS1-205ENST00000636540 SYNMO15061 1565 aa16.98■□□□□ 0.31
SRP54-AS1-205ENST00000636540 UGGT1Q9NYU2 1555 aa16.97■□□□□ 0.31
SRP54-AS1-205ENST00000636540 ITGAEP38570 1179 aa16.96■□□□□ 0.31
SRP54-AS1-205ENST00000636540 RPRD2Q5VT52 1461 aaKnown RBP16.96■□□□□ 0.31
SRP54-AS1-205ENST00000636540 E9PCH4 1651 aa16.96■□□□□ 0.31
SRP54-AS1-205ENST00000636540 KDM5AP29375 1690 aaKnown RBP16.95■□□□□ 0.3
SRP54-AS1-205ENST00000636540 NEURL4Q96JN8 1562 aa16.95■□□□□ 0.3
SRP54-AS1-205ENST00000636540 PIK3C2BO00750 1634 aa16.95■□□□□ 0.3
SRP54-AS1-205ENST00000636540 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.94■□□□□ 0.36e-9■■□□□ 12.6
SRP54-AS1-205ENST00000636540 PTPRTO14522 1441 aa16.94■□□□□ 0.3
SRP54-AS1-205ENST00000636540 NAIPQ13075 1403 aa16.94■□□□□ 0.3
SRP54-AS1-205ENST00000636540 MSH5O43196 834 aa16.93■□□□□ 0.3
SRP54-AS1-205ENST00000636540 HFM1A2PYH4 1435 aa16.93■□□□□ 0.3
SRP54-AS1-205ENST00000636540 NOS1P29475 1434 aa16.92■□□□□ 0.3
SRP54-AS1-205ENST00000636540 ADGRB3O60242 1522 aa16.9■□□□□ 0.3
SRP54-AS1-205ENST00000636540 SPHKAPQ2M3C7 1700 aa16.88■□□□□ 0.29
SRP54-AS1-205ENST00000636540 IQGAP1P46940 1657 aa16.87■□□□□ 0.29
SRP54-AS1-205ENST00000636540 MYO5BQ9ULV0 1848 aa16.86■□□□□ 0.29
SRP54-AS1-205ENST00000636540 SLIT1O75093 1534 aa16.86■□□□□ 0.29
SRP54-AS1-205ENST00000636540 ARHGAP23Q9P227 1491 aa16.86■□□□□ 0.29
SRP54-AS1-205ENST00000636540 DMRT2Q9Y5R5 561 aa16.85■□□□□ 0.29
SRP54-AS1-205ENST00000636540 PKD2Q13563 968 aa16.84■□□□□ 0.29
SRP54-AS1-205ENST00000636540 NUP155O75694 1391 aa16.84■□□□□ 0.29
SRP54-AS1-205ENST00000636540 MED14O60244 1454 aa16.84■□□□□ 0.29
SRP54-AS1-205ENST00000636540 LTBP4Q8N2S1 1624 aa16.84■□□□□ 0.29
SRP54-AS1-205ENST00000636540 NCKAP5LQ9HCH0 1330 aa16.83■□□□□ 0.28
SRP54-AS1-205ENST00000636540 TMEM131LA2VDJ0 1609 aa16.82■□□□□ 0.28
SRP54-AS1-205ENST00000636540 SCAF11Q99590 1463 aaKnown RBP16.81■□□□□ 0.28
SRP54-AS1-205ENST00000636540 THEMISQ8N1K5 641 aaPredicted RBP16.8■□□□□ 0.28
SRP54-AS1-205ENST00000636540 NPHP4O75161 1426 aaPredicted RBP16.79■□□□□ 0.28
SRP54-AS1-205ENST00000636540 TRPM2O94759 1503 aa16.78■□□□□ 0.28
SRP54-AS1-205ENST00000636540 CLTCL1P53675 1640 aa16.77■□□□□ 0.27
SRP54-AS1-205ENST00000636540 TMEM2Q9UHN6 1383 aa16.77■□□□□ 0.27
SRP54-AS1-205ENST00000636540 IDI1Q13907 227 aa16.75■□□□□ 0.27
SRP54-AS1-205ENST00000636540 ANKLE2Q86XL3 938 aa16.75■□□□□ 0.27
SRP54-AS1-205ENST00000636540 SLC52A1Q9NWF4 448 aa16.74■□□□□ 0.27
SRP54-AS1-205ENST00000636540 STRCP1A6NGW2 1772 aa16.74■□□□□ 0.27
SRP54-AS1-205ENST00000636540 IQSEC2Q5JU85 1478 aa16.73■□□□□ 0.27
SRP54-AS1-205ENST00000636540 ZFYVE9O95405 1425 aa16.73■□□□□ 0.27
SRP54-AS1-205ENST00000636540 ZNF335Q9H4Z2 1342 aaPredicted RBP16.72■□□□□ 0.27
SRP54-AS1-205ENST00000636540 CPS1P31327 1500 aa16.71■□□□□ 0.27
SRP54-AS1-205ENST00000636540 KIF1BO60333 1816 aa16.71■□□□□ 0.27
SRP54-AS1-205ENST00000636540 CERKQ8TCT0 537 aa16.7■□□□□ 0.26
SRP54-AS1-205ENST00000636540 LTKP29376 864 aa16.69■□□□□ 0.26
SRP54-AS1-205ENST00000636540 STAG3Q9UJ98 1225 aa16.69■□□□□ 0.26
SRP54-AS1-205ENST00000636540 SETD5Q9C0A6 1442 aa16.69■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms