RNA–Protein interactions for RNA: ENST00000636410.1

CHD2-224, Transcript of chromodomain helicase DNA binding protein 2, humanhuman

TSL 5

Gene CHD2, Length 100 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD2-224ENST00000636410 ITGAEP38570 1179 aa8.09□□□□□ -1.11
CHD2-224ENST00000636410 CHIC2Q9UKJ5 165 aa8.09□□□□□ -1.11
CHD2-224ENST00000636410 CEP152O94986 1710 aa8.09□□□□□ -1.11
CHD2-224ENST00000636410 KDM5DQ9BY66 1539 aa8.08□□□□□ -1.12
CHD2-224ENST00000636410 HFM1A2PYH4 1435 aa8.07□□□□□ -1.12
CHD2-224ENST00000636410 ANKRD50Q9ULJ7 1429 aa8.07□□□□□ -1.12
CHD2-224ENST00000636410 RRP7BPQ9NSQ0 103 aa8.07□□□□□ -1.12
CHD2-224ENST00000636410 C3P01024 1663 aa8.07□□□□□ -1.12
CHD2-224ENST00000636410 CAMSAP1Q5T5Y3 1602 aa8.07□□□□□ -1.12
CHD2-224ENST00000636410 VWDEQ8N2E2 1590 aa8.06□□□□□ -1.12
CHD2-224ENST00000636410 NAIPQ13075 1403 aa8.06□□□□□ -1.12
CHD2-224ENST00000636410 CNTLNQ9NXG0 1405 aa8.05□□□□□ -1.12
CHD2-224ENST00000636410 IQGAP3Q86VI3 1631 aa8.05□□□□□ -1.12
CHD2-224ENST00000636410 KIF3BO15066 747 aa8.05□□□□□ -1.12
CHD2-224ENST00000636410 MLECQ14165 292 aa8.05□□□□□ -1.12
CHD2-224ENST00000636410 ABCC3O15438 1527 aa8.04□□□□□ -1.12
CHD2-224ENST00000636410 KDM4FA0A1W2PPD8 638 aa8.04□□□□□ -1.12
CHD2-224ENST00000636410 PTPRMP28827 1452 aa8.04□□□□□ -1.12
CHD2-224ENST00000636410 LMTK2Q8IWU2 1503 aa8.03□□□□□ -1.12
CHD2-224ENST00000636410 TET3O43151 1660 aa8.03□□□□□ -1.12
CHD2-224ENST00000636410 GGT6Q6P531 493 aa8.03□□□□□ -1.12
CHD2-224ENST00000636410 EFCAB6Q5THR3 1501 aa8.03□□□□□ -1.12
CHD2-224ENST00000636410 PPP6R1Q9UPN7 881 aa8.02□□□□□ -1.13
CHD2-224ENST00000636410 PREX1Q8TCU6 1659 aa8.02□□□□□ -1.13
CHD2-224ENST00000636410 KANK1Q14678 1352 aa8.01□□□□□ -1.13
CHD2-224ENST00000636410 ESF1Q9H501 851 aaKnown RBP8.01□□□□□ -1.13
CHD2-224ENST00000636410 PZPP20742 1482 aa8□□□□□ -1.13
CHD2-224ENST00000636410 MYO3AQ8NEV4 1616 aa8□□□□□ -1.13
CHD2-224ENST00000636410 E9PCH4 1651 aa8□□□□□ -1.13
CHD2-224ENST00000636410 SETD5Q9C0A6 1442 aa8□□□□□ -1.13
CHD2-224ENST00000636410 SPATA31D1Q6ZQQ2 1576 aa8□□□□□ -1.13
CHD2-224ENST00000636410 WASHC2CQ9Y4E1 1318 aa8□□□□□ -1.13
CHD2-224ENST00000636410 ZNF142P52746 1687 aaPredicted RBP7.99□□□□□ -1.13
CHD2-224ENST00000636410 ARHGAP31Q2M1Z3 1444 aa7.99□□□□□ -1.13
CHD2-224ENST00000636410 ZMYM3Q14202 1370 aa7.98□□□□□ -1.13
CHD2-224ENST00000636410 NPATQ14207 1427 aa7.98□□□□□ -1.13
CHD2-224ENST00000636410 TRIM26Q12899 539 aaPredicted RBP7.98□□□□□ -1.13
CHD2-224ENST00000636410 GRWD1Q9BQ67 446 aaKnown RBP eCLIP7.98□□□□□ -1.137e-9■□□□□ 8.7
CHD2-224ENST00000636410 RPRD2Q5VT52 1461 aaKnown RBP7.98□□□□□ -1.13
CHD2-224ENST00000636410 SPHKAPQ2M3C7 1700 aa7.98□□□□□ -1.13
CHD2-224ENST00000636410 NUP155O75694 1391 aa7.97□□□□□ -1.13
CHD2-224ENST00000636410 ACIN1Q9UKV3 1341 aaKnown RBP7.97□□□□□ -1.13
CHD2-224ENST00000636410 RAB3GAP2Q9H2M9 1393 aa7.97□□□□□ -1.13
CHD2-224ENST00000636410 ERVK-7P63135 1459 aa7.96□□□□□ -1.13
CHD2-224ENST00000636410 SYNMO15061 1565 aa7.96□□□□□ -1.14
CHD2-224ENST00000636410 CEBPAP49715 358 aaPredicted RBP7.95□□□□□ -1.14
CHD2-224ENST00000636410 CEP170BQ9Y4F5 1589 aaPredicted RBP7.95□□□□□ -1.14
CHD2-224ENST00000636410 PIK3C2BO00750 1634 aa7.95□□□□□ -1.14
CHD2-224ENST00000636410 CFAP65Q6ZU64 1925 aaKnown RBP7.95□□□□□ -1.14
CHD2-224ENST00000636410 KDM5AP29375 1690 aaKnown RBP7.95□□□□□ -1.14
CHD2-224ENST00000636410 SETD1BQ9UPS6 1966 aaKnown RBP7.94□□□□□ -1.14
CHD2-224ENST00000636410 PLPPR3Q6T4P5 718 aa7.94□□□□□ -1.14
CHD2-224ENST00000636410 AEBP2Q6ZN18 517 aaPredicted RBP7.94□□□□□ -1.14
CHD2-224ENST00000636410 NOS1P29475 1434 aa7.94□□□□□ -1.14
CHD2-224ENST00000636410 UHRF1BP1Q6BDS2 1440 aa7.94□□□□□ -1.14
CHD2-224ENST00000636410 LMTK3Q96Q04 1460 aa7.94□□□□□ -1.14
CHD2-224ENST00000636410 NLRP1Q9C000 1473 aa7.94□□□□□ -1.14
CHD2-224ENST00000636410 TRPM2O94759 1503 aa7.93□□□□□ -1.14
CHD2-224ENST00000636410 UBR1Q8IWV7 1749 aa7.93□□□□□ -1.14
CHD2-224ENST00000636410 TRIM52Q96A61 297 aa7.93□□□□□ -1.14
CHD2-224ENST00000636410 TNRQ92752 1358 aa7.93□□□□□ -1.14
CHD2-224ENST00000636410 HRCP23327 699 aa7.92□□□□□ -1.14
CHD2-224ENST00000636410 A2ML1A8K2U0 1454 aa7.92□□□□□ -1.14
CHD2-224ENST00000636410 ADGRB3O60242 1522 aa7.92□□□□□ -1.14
CHD2-224ENST00000636410 CLTCL1P53675 1640 aa7.92□□□□□ -1.14
CHD2-224ENST00000636410 FBXO31Q5XUX0 539 aaPredicted RBP7.91□□□□□ -1.14
CHD2-224ENST00000636410 UGGT1Q9NYU2 1555 aa7.91□□□□□ -1.14
CHD2-224ENST00000636410 POLR1AO95602 1720 aaPredicted RBP7.91□□□□□ -1.14
CHD2-224ENST00000636410 KIF1BO60333 1816 aa7.91□□□□□ -1.14
CHD2-224ENST00000636410 MYO5BQ9ULV0 1848 aa7.91□□□□□ -1.14
CHD2-224ENST00000636410 PTPRTO14522 1441 aa7.9□□□□□ -1.14
CHD2-224ENST00000636410 SLC4A1APQ9BWU0 796 aaKnown RBP7.9□□□□□ -1.14
CHD2-224ENST00000636410 TMEM131LA2VDJ0 1609 aa7.89□□□□□ -1.15
CHD2-224ENST00000636410 PKD2Q13563 968 aa7.89□□□□□ -1.15
CHD2-224ENST00000636410 MPHOSPH9Q99550 1183 aa7.88□□□□□ -1.15
CHD2-224ENST00000636410 PLA2R1Q13018 1463 aa7.87□□□□□ -1.15
CHD2-224ENST00000636410 STRCQ7RTU9 1775 aa7.87□□□□□ -1.15
CHD2-224ENST00000636410 SLIT1O75093 1534 aa7.87□□□□□ -1.15
CHD2-224ENST00000636410 NEURL4Q96JN8 1562 aa7.86□□□□□ -1.15
CHD2-224ENST00000636410 PCGF6Q9BYE7 350 aa7.86□□□□□ -1.15
CHD2-224ENST00000636410 SLC52A1Q9NWF4 448 aa7.86□□□□□ -1.15
CHD2-224ENST00000636410 IFT172Q9UG01 1749 aa7.86□□□□□ -1.15
CHD2-224ENST00000636410 CCDC144AA2RUR9 1427 aa7.86□□□□□ -1.15
CHD2-224ENST00000636410 FOXD1Q16676 465 aa7.85□□□□□ -1.15
CHD2-224ENST00000636410 ARHGAP23Q9P227 1491 aa7.85□□□□□ -1.15
CHD2-224ENST00000636410 PPLO60437 1756 aa7.84□□□□□ -1.15
CHD2-224ENST00000636410 IQGAP1P46940 1657 aa7.84□□□□□ -1.15
CHD2-224ENST00000636410 IDI1Q13907 227 aa7.84□□□□□ -1.15
CHD2-224ENST00000636410 DHX57Q6P158 1386 aaKnown RBP7.84□□□□□ -1.16
CHD2-224ENST00000636410 NEXMIFQ5QGS0 1516 aa7.83□□□□□ -1.16
CHD2-224ENST00000636410 HSPA2P54652 639 aa7.83□□□□□ -1.16
CHD2-224ENST00000636410 THEMISQ8N1K5 641 aaPredicted RBP7.83□□□□□ -1.16
CHD2-224ENST00000636410 ANKRD30BQ9BXX2 1392 aa7.83□□□□□ -1.16
CHD2-224ENST00000636410 TMEM2Q9UHN6 1383 aa7.83□□□□□ -1.16
CHD2-224ENST00000636410 SCAF11Q99590 1463 aaKnown RBP7.82□□□□□ -1.16
CHD2-224ENST00000636410 ZFYVE9O95405 1425 aa7.82□□□□□ -1.16
CHD2-224ENST00000636410 STAG3Q9UJ98 1225 aa7.82□□□□□ -1.16
CHD2-224ENST00000636410 MED14O60244 1454 aa7.81□□□□□ -1.16
CHD2-224ENST00000636410 SPATA31E1Q6ZUB1 1445 aa7.81□□□□□ -1.16
CHD2-224ENST00000636410 RIMS2Q9UQ26 1411 aa7.8□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms