RNA–Protein interactions for RNA: ENST00000635904.1

CACNB4-217, Transcript of calcium voltage-gated channel auxiliary subunit beta 4, humanhuman

TSL 5

Gene CACNB4, Length 2,444 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB4-217ENST00000635904 MROH1Q8NDA8 1641 aa12.1□□□□□ -0.47
CACNB4-217ENST00000635904 RNF17Q9BXT8 1623 aaKnown RBP12.09□□□□□ -0.47
CACNB4-217ENST00000635904 AGLP35573 1532 aa12.08□□□□□ -0.48
CACNB4-217ENST00000635904 KDM5DQ9BY66 1539 aa12.08□□□□□ -0.48
CACNB4-217ENST00000635904 PRDM15P57071 1507 aaPredicted RBP12.08□□□□□ -0.48
CACNB4-217ENST00000635904 KIF3BO15066 747 aa12.07□□□□□ -0.48
CACNB4-217ENST00000635904 DHX57Q6P158 1386 aaKnown RBP12.07□□□□□ -0.48
CACNB4-217ENST00000635904 PZPP20742 1482 aa12.06□□□□□ -0.48
CACNB4-217ENST00000635904 IQGAP3Q86VI3 1631 aa12.05□□□□□ -0.48
CACNB4-217ENST00000635904 VWDEQ8N2E2 1590 aa12.05□□□□□ -0.48
CACNB4-217ENST00000635904 NUP155O75694 1391 aa12.05□□□□□ -0.48
CACNB4-217ENST00000635904 FAM135AQ9P2D6 1515 aa12.04□□□□□ -0.48
CACNB4-217ENST00000635904 ACIN1Q9UKV3 1341 aaKnown RBP12.04□□□□□ -0.48
CACNB4-217ENST00000635904 TRIM52Q96A61 297 aa12.04□□□□□ -0.48
CACNB4-217ENST00000635904 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.01□□□□□ -0.496e-7■■■■■ 26.8
CACNB4-217ENST00000635904 GGT6Q6P531 493 aa12.01□□□□□ -0.49
CACNB4-217ENST00000635904 MPHOSPH9Q99550 1183 aa12.01□□□□□ -0.49
CACNB4-217ENST00000635904 CEP152O94986 1710 aa12□□□□□ -0.49
CACNB4-217ENST00000635904 ABCC3O15438 1527 aa12□□□□□ -0.49
CACNB4-217ENST00000635904 LMTK2Q8IWU2 1503 aa12□□□□□ -0.49
CACNB4-217ENST00000635904 TET3O43151 1660 aa11.99□□□□□ -0.49
CACNB4-217ENST00000635904 SLC4A1APQ9BWU0 796 aaKnown RBP11.99□□□□□ -0.49
CACNB4-217ENST00000635904 ZC3H13Q5T200 1668 aaKnown RBP11.99□□□□□ -0.49
CACNB4-217ENST00000635904 KANK1Q14678 1352 aa11.98□□□□□ -0.49
CACNB4-217ENST00000635904 EFCAB6Q5THR3 1501 aa11.98□□□□□ -0.49
CACNB4-217ENST00000635904 E9PCH4 1651 aa11.97□□□□□ -0.49
CACNB4-217ENST00000635904 CCER1Q8TC90 406 aaPredicted RBP11.97□□□□□ -0.49
CACNB4-217ENST00000635904 ARID4BQ4LE39 1312 aaPredicted RBP11.97□□□□□ -0.49
CACNB4-217ENST00000635904 CAMSAP1Q5T5Y3 1602 aa11.96□□□□□ -0.49
CACNB4-217ENST00000635904 ZEB1P37275 1124 aaPredicted RBP11.96□□□□□ -0.49
CACNB4-217ENST00000635904 PKD2Q13563 968 aa11.96□□□□□ -0.49
CACNB4-217ENST00000635904 FOXD1Q16676 465 aa11.96□□□□□ -0.49
CACNB4-217ENST00000635904 MLECQ14165 292 aa11.96□□□□□ -0.5
CACNB4-217ENST00000635904 WASHC2CQ9Y4E1 1318 aa11.96□□□□□ -0.5
CACNB4-217ENST00000635904 CLTCQ00610 1675 aaKnown RBP11.95□□□□□ -0.5
CACNB4-217ENST00000635904 PPP6R1Q9UPN7 881 aa11.95□□□□□ -0.5
CACNB4-217ENST00000635904 NPATQ14207 1427 aa11.94□□□□□ -0.5
CACNB4-217ENST00000635904 CLSPNQ9HAW4 1339 aa11.94□□□□□ -0.5
CACNB4-217ENST00000635904 ANKRD30BQ9BXX2 1392 aa11.93□□□□□ -0.5
CACNB4-217ENST00000635904 ARHGAP31Q2M1Z3 1444 aa11.93□□□□□ -0.5
CACNB4-217ENST00000635904 PLA2R1Q13018 1463 aa11.93□□□□□ -0.5
CACNB4-217ENST00000635904 RPRD2Q5VT52 1461 aaKnown RBP11.93□□□□□ -0.5
CACNB4-217ENST00000635904 FER1L4A9Z1Z3 1794 aa11.92□□□□□ -0.5
CACNB4-217ENST00000635904 ADAMTSL3P82987 1691 aa11.91□□□□□ -0.5
CACNB4-217ENST00000635904 SPHKAPQ2M3C7 1700 aa11.91□□□□□ -0.5
CACNB4-217ENST00000635904 CFAP65Q6ZU64 1925 aaKnown RBP11.91□□□□□ -0.5
CACNB4-217ENST00000635904 PTPRTO14522 1441 aa11.91□□□□□ -0.5
CACNB4-217ENST00000635904 MROH2AA6NES4 1674 aa11.91□□□□□ -0.5
CACNB4-217ENST00000635904 MADDQ8WXG6 1647 aa11.91□□□□□ -0.5
CACNB4-217ENST00000635904 CNTLNQ9NXG0 1405 aa11.9□□□□□ -0.5
CACNB4-217ENST00000635904 TRPM2O94759 1503 aa11.89□□□□□ -0.51
CACNB4-217ENST00000635904 PREX1Q8TCU6 1659 aa11.88□□□□□ -0.51
CACNB4-217ENST00000635904 NOS1P29475 1434 aa11.88□□□□□ -0.51
CACNB4-217ENST00000635904 SIN3AQ96ST3 1273 aa11.88□□□□□ -0.51
CACNB4-217ENST00000635904 ZMYM3Q14202 1370 aa11.88□□□□□ -0.51
CACNB4-217ENST00000635904 SYNMO15061 1565 aa11.87□□□□□ -0.51
CACNB4-217ENST00000635904 C3P01024 1663 aa11.87□□□□□ -0.51
CACNB4-217ENST00000635904 RIMS1Q86UR5 1692 aaKnown RBP11.87□□□□□ -0.51
CACNB4-217ENST00000635904 SPATA31D1Q6ZQQ2 1576 aa11.86□□□□□ -0.51
CACNB4-217ENST00000635904 UGGT1Q9NYU2 1555 aa11.86□□□□□ -0.51
CACNB4-217ENST00000635904 ERVK-7P63135 1459 aa11.86□□□□□ -0.51
CACNB4-217ENST00000635904 ESF1Q9H501 851 aaKnown RBP11.86□□□□□ -0.51
CACNB4-217ENST00000635904 CLTCL1P53675 1640 aa11.86□□□□□ -0.51
CACNB4-217ENST00000635904 FBXO31Q5XUX0 539 aaPredicted RBP11.85□□□□□ -0.51
CACNB4-217ENST00000635904 CCDC144AA2RUR9 1427 aa11.85□□□□□ -0.51
CACNB4-217ENST00000635904 PIK3C2BO00750 1634 aa11.85□□□□□ -0.51
CACNB4-217ENST00000635904 NEUROD1Q13562 356 aa11.82□□□□□ -0.52
CACNB4-217ENST00000635904 CEBPAP49715 358 aaPredicted RBP11.82□□□□□ -0.52
CACNB4-217ENST00000635904 SPATA31E1Q6ZUB1 1445 aa11.81□□□□□ -0.52
CACNB4-217ENST00000635904 PTPRMP28827 1452 aa11.8□□□□□ -0.52
CACNB4-217ENST00000635904 NEURL4Q96JN8 1562 aa11.79□□□□□ -0.52
CACNB4-217ENST00000635904 KIF1BO60333 1816 aa11.79□□□□□ -0.52
CACNB4-217ENST00000635904 ADGRB3O60242 1522 aa11.79□□□□□ -0.52
CACNB4-217ENST00000635904 TNRQ92752 1358 aa11.78□□□□□ -0.52
CACNB4-217ENST00000635904 KDM4FA0A1W2PPD8 638 aa11.78□□□□□ -0.52
CACNB4-217ENST00000635904 IDI1Q13907 227 aa11.78□□□□□ -0.52
CACNB4-217ENST00000635904 SLC52A1Q9NWF4 448 aa11.78□□□□□ -0.52
CACNB4-217ENST00000635904 TONSLQ96HA7 1378 aa11.77□□□□□ -0.52
CACNB4-217ENST00000635904 TMEM131LA2VDJ0 1609 aa11.77□□□□□ -0.53
CACNB4-217ENST00000635904 TIMELESSQ9UNS1 1208 aa11.77□□□□□ -0.53
CACNB4-217ENST00000635904 MYO5BQ9ULV0 1848 aa11.77□□□□□ -0.53
CACNB4-217ENST00000635904 MYO3AQ8NEV4 1616 aa11.76□□□□□ -0.53
CACNB4-217ENST00000635904 SETD1BQ9UPS6 1966 aaKnown RBP11.76□□□□□ -0.53
CACNB4-217ENST00000635904 PLPPR3Q6T4P5 718 aa11.76□□□□□ -0.53
CACNB4-217ENST00000635904 L3MBTL2Q969R5 705 aa11.76□□□□□ -0.53
CACNB4-217ENST00000635904 NLRP1Q9C000 1473 aa11.75□□□□□ -0.53
CACNB4-217ENST00000635904 KDM5AP29375 1690 aaKnown RBP11.74□□□□□ -0.53
CACNB4-217ENST00000635904 UBR1Q8IWV7 1749 aa11.74□□□□□ -0.53
CACNB4-217ENST00000635904 IFT172Q9UG01 1749 aa11.74□□□□□ -0.53
CACNB4-217ENST00000635904 RGL3Q3MIN7 710 aa11.74□□□□□ -0.53
CACNB4-217ENST00000635904 A2ML1A8K2U0 1454 aa11.73□□□□□ -0.53
CACNB4-217ENST00000635904 PPLO60437 1756 aa11.72□□□□□ -0.53
CACNB4-217ENST00000635904 ZNF142P52746 1687 aaPredicted RBP11.71□□□□□ -0.53
CACNB4-217ENST00000635904 CEP170BQ9Y4F5 1589 aaPredicted RBP11.71□□□□□ -0.53
CACNB4-217ENST00000635904 NEXMIFQ5QGS0 1516 aa11.71□□□□□ -0.53
CACNB4-217ENST00000635904 CHGAP10645 457 aaKnown RBP11.71□□□□□ -0.54
CACNB4-217ENST00000635904 PPP1R15AO75807 674 aaPredicted RBP11.7□□□□□ -0.54
CACNB4-217ENST00000635904 DCAF11Q8TEB1 546 aa11.7□□□□□ -0.54
CACNB4-217ENST00000635904 MYOM2P54296 1465 aa11.69□□□□□ -0.54
CACNB4-217ENST00000635904 UHRF1BP1Q6BDS2 1440 aa11.69□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 107.7 ms