RNA–Protein interactions for RNA: ENST00000635828.1

CDKL5-209, Transcript of cyclin dependent kinase like 5, humanhuman

TSL 5 BASIC

Gene CDKL5, Length 3,823 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL5-209ENST00000635828 GCC2Q8IWJ2 1684 aa12.84□□□□□ -0.35
CDKL5-209ENST00000635828 RAB3GAP2Q9H2M9 1393 aa12.83□□□□□ -0.36
CDKL5-209ENST00000635828 REREQ9P2R6 1566 aa12.82□□□□□ -0.36
CDKL5-209ENST00000635828 FOXD1Q16676 465 aa12.82□□□□□ -0.36
CDKL5-209ENST00000635828 CEP152O94986 1710 aa12.82□□□□□ -0.36
CDKL5-209ENST00000635828 CLTCQ00610 1675 aaKnown RBP12.81□□□□□ -0.36
CDKL5-209ENST00000635828 ERBINQ96RT1 1412 aa12.81□□□□□ -0.36
CDKL5-209ENST00000635828 RIMS1Q86UR5 1692 aaKnown RBP12.8□□□□□ -0.36
CDKL5-209ENST00000635828 ADAMTSL3P82987 1691 aa12.8□□□□□ -0.36
CDKL5-209ENST00000635828 FER1L4A9Z1Z3 1794 aa12.8□□□□□ -0.36
CDKL5-209ENST00000635828 AGLP35573 1532 aa12.8□□□□□ -0.36
CDKL5-209ENST00000635828 SETD5Q9C0A6 1442 aa12.79□□□□□ -0.36
CDKL5-209ENST00000635828 FBXO31Q5XUX0 539 aaPredicted RBP12.79□□□□□ -0.36
CDKL5-209ENST00000635828 TRIM52Q96A61 297 aa12.79□□□□□ -0.36
CDKL5-209ENST00000635828 DEPDC5O75140 1603 aa12.78□□□□□ -0.36
CDKL5-209ENST00000635828 WASHC2CQ9Y4E1 1318 aa12.78□□□□□ -0.36
CDKL5-209ENST00000635828 RNF17Q9BXT8 1623 aaKnown RBP12.78□□□□□ -0.36
CDKL5-209ENST00000635828 EIF2AK4Q9P2K8 1649 aaKnown RBP12.78□□□□□ -0.36
CDKL5-209ENST00000635828 NUP155O75694 1391 aa12.77□□□□□ -0.36
CDKL5-209ENST00000635828 PRDM15P57071 1507 aaPredicted RBP12.76□□□□□ -0.37
CDKL5-209ENST00000635828 UNC13BO14795 1591 aa12.75□□□□□ -0.37
CDKL5-209ENST00000635828 ABCC3O15438 1527 aa12.75□□□□□ -0.37
CDKL5-209ENST00000635828 C3P01024 1663 aa12.74□□□□□ -0.37
CDKL5-209ENST00000635828 PZPP20742 1482 aa12.74□□□□□ -0.37
CDKL5-209ENST00000635828 ZMYM3Q14202 1370 aa12.74□□□□□ -0.37
CDKL5-209ENST00000635828 FAM135AQ9P2D6 1515 aa12.73□□□□□ -0.37
CDKL5-209ENST00000635828 PTPRMP28827 1452 aa12.73□□□□□ -0.37
CDKL5-209ENST00000635828 VWDEQ8N2E2 1590 aa12.73□□□□□ -0.37
CDKL5-209ENST00000635828 KDM5DQ9BY66 1539 aa12.72□□□□□ -0.37
CDKL5-209ENST00000635828 CAMSAP1Q5T5Y3 1602 aa12.72□□□□□ -0.37
CDKL5-209ENST00000635828 E9PCH4 1651 aa12.71□□□□□ -0.37
CDKL5-209ENST00000635828 NPATQ14207 1427 aa12.71□□□□□ -0.37
CDKL5-209ENST00000635828 UGGT1Q9NYU2 1555 aa12.71□□□□□ -0.38
CDKL5-209ENST00000635828 ESF1Q9H501 851 aaKnown RBP12.71□□□□□ -0.38
CDKL5-209ENST00000635828 IQGAP3Q86VI3 1631 aa12.71□□□□□ -0.38
CDKL5-209ENST00000635828 SLC4A1APQ9BWU0 796 aaKnown RBP12.7□□□□□ -0.38
CDKL5-209ENST00000635828 MPHOSPH9Q99550 1183 aa12.7□□□□□ -0.38
CDKL5-209ENST00000635828 PKD2Q13563 968 aa12.7□□□□□ -0.38
CDKL5-209ENST00000635828 SENP3Q9H4L4 574 aaPredicted RBP12.68□□□□□ -0.38
CDKL5-209ENST00000635828 EFCAB6Q5THR3 1501 aa12.67□□□□□ -0.38
CDKL5-209ENST00000635828 KANK1Q14678 1352 aa12.67□□□□□ -0.38
CDKL5-209ENST00000635828 TET3O43151 1660 aa12.66□□□□□ -0.38
CDKL5-209ENST00000635828 ZC3H13Q5T200 1668 aaKnown RBP12.65□□□□□ -0.38
CDKL5-209ENST00000635828 PREX1Q8TCU6 1659 aa12.65□□□□□ -0.38
CDKL5-209ENST00000635828 PLA2R1Q13018 1463 aa12.65□□□□□ -0.38
CDKL5-209ENST00000635828 SYNMO15061 1565 aa12.64□□□□□ -0.39
CDKL5-209ENST00000635828 LMTK2Q8IWU2 1503 aa12.64□□□□□ -0.39
CDKL5-209ENST00000635828 MROH2AA6NES4 1674 aa12.64□□□□□ -0.39
CDKL5-209ENST00000635828 HSPA2P54652 639 aa12.63□□□□□ -0.39
CDKL5-209ENST00000635828 DHX57Q6P158 1386 aaKnown RBP12.63□□□□□ -0.39
CDKL5-209ENST00000635828 ERVK-7P63135 1459 aa12.62□□□□□ -0.39
CDKL5-209ENST00000635828 IDI1Q13907 227 aa12.61□□□□□ -0.39
CDKL5-209ENST00000635828 SIN3AQ96ST3 1273 aa12.61□□□□□ -0.39
CDKL5-209ENST00000635828 CNTLNQ9NXG0 1405 aa12.61□□□□□ -0.39
CDKL5-209ENST00000635828 PPP6R1Q9UPN7 881 aa12.61□□□□□ -0.39
CDKL5-209ENST00000635828 NUTM2DQ5VT03 806 aaPredicted RBP12.6□□□□□ -0.39
CDKL5-209ENST00000635828 MYO5BQ9ULV0 1848 aa12.6□□□□□ -0.39
CDKL5-209ENST00000635828 SPHKAPQ2M3C7 1700 aa12.6□□□□□ -0.39
CDKL5-209ENST00000635828 SPATA31D1Q6ZQQ2 1576 aa12.59□□□□□ -0.39
CDKL5-209ENST00000635828 NOS1P29475 1434 aa12.59□□□□□ -0.39
CDKL5-209ENST00000635828 ARHGAP31Q2M1Z3 1444 aa12.59□□□□□ -0.39
CDKL5-209ENST00000635828 MYO3AQ8NEV4 1616 aa12.59□□□□□ -0.39
CDKL5-209ENST00000635828 CLTCL1P53675 1640 aa12.59□□□□□ -0.39
CDKL5-209ENST00000635828 TNRQ92752 1358 aa12.58□□□□□ -0.4
CDKL5-209ENST00000635828 CHGAP10645 457 aaKnown RBP12.58□□□□□ -0.4
CDKL5-209ENST00000635828 PIK3C2BO00750 1634 aa12.57□□□□□ -0.4
CDKL5-209ENST00000635828 HRCP23327 699 aa12.57□□□□□ -0.4
CDKL5-209ENST00000635828 AEBP2Q6ZN18 517 aaPredicted RBP12.57□□□□□ -0.4
CDKL5-209ENST00000635828 LMTK3Q96Q04 1460 aa12.57□□□□□ -0.4
CDKL5-209ENST00000635828 NEUROD1Q13562 356 aa12.56□□□□□ -0.4
CDKL5-209ENST00000635828 ANKRD30BQ9BXX2 1392 aa12.56□□□□□ -0.4
CDKL5-209ENST00000635828 RGL3Q3MIN7 710 aa12.55□□□□□ -0.4
CDKL5-209ENST00000635828 PTPRTO14522 1441 aa12.55□□□□□ -0.4
CDKL5-209ENST00000635828 RPRD2Q5VT52 1461 aaKnown RBP12.55□□□□□ -0.4
CDKL5-209ENST00000635828 SETD1BQ9UPS6 1966 aaKnown RBP12.54□□□□□ -0.4
CDKL5-209ENST00000635828 TRPM2O94759 1503 aa12.53□□□□□ -0.4
CDKL5-209ENST00000635828 CEP170BQ9Y4F5 1589 aaPredicted RBP12.53□□□□□ -0.4
CDKL5-209ENST00000635828 UBR1Q8IWV7 1749 aa12.53□□□□□ -0.4
CDKL5-209ENST00000635828 TMEM131LA2VDJ0 1609 aa12.51□□□□□ -0.41
CDKL5-209ENST00000635828 UHRF1BP1Q6BDS2 1440 aa12.51□□□□□ -0.41
CDKL5-209ENST00000635828 CCER1Q8TC90 406 aaPredicted RBP12.51□□□□□ -0.41
CDKL5-209ENST00000635828 LTKP29376 864 aa12.5□□□□□ -0.41
CDKL5-209ENST00000635828 CCDC144AA2RUR9 1427 aa12.5□□□□□ -0.41
CDKL5-209ENST00000635828 STAG3Q9UJ98 1225 aa12.5□□□□□ -0.41
CDKL5-209ENST00000635828 NCKAP5LQ9HCH0 1330 aa12.5□□□□□ -0.41
CDKL5-209ENST00000635828 A2ML1A8K2U0 1454 aa12.5□□□□□ -0.41
CDKL5-209ENST00000635828 ZNF142P52746 1687 aaPredicted RBP12.48□□□□□ -0.41
CDKL5-209ENST00000635828 ZNF326Q5BKZ1 582 aaKnown RBP12.48□□□□□ -0.41
CDKL5-209ENST00000635828 KIF1BO60333 1816 aa12.48□□□□□ -0.41
CDKL5-209ENST00000635828 STRCQ7RTU9 1775 aa12.47□□□□□ -0.41
CDKL5-209ENST00000635828 SLC52A1Q9NWF4 448 aa12.47□□□□□ -0.41
CDKL5-209ENST00000635828 NLRP1Q9C000 1473 aa12.47□□□□□ -0.41
CDKL5-209ENST00000635828 ADGRB3O60242 1522 aa12.47□□□□□ -0.41
CDKL5-209ENST00000635828 KDM2AQ9Y2K7 1162 aa12.46□□□□□ -0.41
CDKL5-209ENST00000635828 SPATA31E1Q6ZUB1 1445 aa12.46□□□□□ -0.41
CDKL5-209ENST00000635828 ADGRF5Q8IZF2 1346 aa12.43□□□□□ -0.42
CDKL5-209ENST00000635828 TMEM2Q9UHN6 1383 aa12.43□□□□□ -0.42
CDKL5-209ENST00000635828 TXNDC2Q86VQ3 553 aa12.43□□□□□ -0.42
CDKL5-209ENST00000635828 NEXMIFQ5QGS0 1516 aa12.43□□□□□ -0.42
CDKL5-209ENST00000635828 DCAF11Q8TEB1 546 aa12.43□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms