RNA–Protein interactions for RNA: ENST00000635675.2

LINC00339-210, long intergenic non-protein coding RNA 339, humanhuman

TSL 5 BASIC

Gene LINC00339, Length 1,404 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00339-210ENST00000635675 ROCK1Q13464 1354 aa14.83□□□□□ -0.03
LINC00339-210ENST00000635675 ERBINQ96RT1 1412 aa14.83□□□□□ -0.03
LINC00339-210ENST00000635675 CEBPAP49715 358 aaPredicted RBP14.83□□□□□ -0.04
LINC00339-210ENST00000635675 RNF17Q9BXT8 1623 aaKnown RBP14.82□□□□□ -0.04
LINC00339-210ENST00000635675 ZMYM3Q14202 1370 aa14.81□□□□□ -0.04
LINC00339-210ENST00000635675 MROH2AA6NES4 1674 aa14.8□□□□□ -0.04
LINC00339-210ENST00000635675 CLTCQ00610 1675 aaKnown RBP14.8□□□□□ -0.04
LINC00339-210ENST00000635675 PLPPR3Q6T4P5 718 aa14.8□□□□□ -0.04
LINC00339-210ENST00000635675 ANKRD50Q9ULJ7 1429 aa14.79□□□□□ -0.04
LINC00339-210ENST00000635675 C3P01024 1663 aa14.79□□□□□ -0.04
LINC00339-210ENST00000635675 MROH1Q8NDA8 1641 aa14.79□□□□□ -0.04
LINC00339-210ENST00000635675 FAM135AQ9P2D6 1515 aa14.79□□□□□ -0.04
LINC00339-210ENST00000635675 WASHC2CQ9Y4E1 1318 aa14.78□□□□□ -0.04
LINC00339-210ENST00000635675 KDM5DQ9BY66 1539 aa14.77□□□□□ -0.04
LINC00339-210ENST00000635675 DEPDC5O75140 1603 aa14.76□□□□□ -0.05
LINC00339-210ENST00000635675 PRDM15P57071 1507 aaPredicted RBP14.75□□□□□ -0.05
LINC00339-210ENST00000635675 SETD1BQ9UPS6 1966 aaKnown RBP14.75□□□□□ -0.05
LINC00339-210ENST00000635675 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.75□□□□□ -0.052e-8■■■□□ 14.6
LINC00339-210ENST00000635675 ABCC3O15438 1527 aa14.74□□□□□ -0.05
LINC00339-210ENST00000635675 ZC3H13Q5T200 1668 aaKnown RBP14.73□□□□□ -0.05
LINC00339-210ENST00000635675 NPATQ14207 1427 aa14.73□□□□□ -0.05
LINC00339-210ENST00000635675 KANK1Q14678 1352 aa14.72□□□□□ -0.05
LINC00339-210ENST00000635675 VWDEQ8N2E2 1590 aa14.72□□□□□ -0.05
LINC00339-210ENST00000635675 NAIPQ13075 1403 aa14.71□□□□□ -0.05
LINC00339-210ENST00000635675 PZPP20742 1482 aa14.71□□□□□ -0.05
LINC00339-210ENST00000635675 LMTK3Q96Q04 1460 aa14.71□□□□□ -0.05
LINC00339-210ENST00000635675 CEP152O94986 1710 aa14.71□□□□□ -0.05
LINC00339-210ENST00000635675 FBXO31Q5XUX0 539 aaPredicted RBP14.7□□□□□ -0.06
LINC00339-210ENST00000635675 SENP3Q9H4L4 574 aaPredicted RBP14.7□□□□□ -0.06
LINC00339-210ENST00000635675 HFM1A2PYH4 1435 aa14.7□□□□□ -0.06
LINC00339-210ENST00000635675 PREX1Q8TCU6 1659 aa14.69□□□□□ -0.06
LINC00339-210ENST00000635675 CAMSAP1Q5T5Y3 1602 aa14.69□□□□□ -0.06
LINC00339-210ENST00000635675 LMTK2Q8IWU2 1503 aa14.68□□□□□ -0.06
LINC00339-210ENST00000635675 UNC13BO14795 1591 aa14.68□□□□□ -0.06
LINC00339-210ENST00000635675 GCC2Q8IWJ2 1684 aa14.68□□□□□ -0.06
LINC00339-210ENST00000635675 ARHGAP31Q2M1Z3 1444 aa14.67□□□□□ -0.06
LINC00339-210ENST00000635675 UHRF1BP1Q6BDS2 1440 aa14.67□□□□□ -0.06
LINC00339-210ENST00000635675 TNRQ92752 1358 aa14.65□□□□□ -0.06
LINC00339-210ENST00000635675 HSPA2P54652 639 aa14.65□□□□□ -0.06
LINC00339-210ENST00000635675 NUP155O75694 1391 aa14.64□□□□□ -0.07
LINC00339-210ENST00000635675 SPATA31D1Q6ZQQ2 1576 aa14.64□□□□□ -0.07
LINC00339-210ENST00000635675 CFAP65Q6ZU64 1925 aaKnown RBP14.64□□□□□ -0.07
LINC00339-210ENST00000635675 ERVK-7P63135 1459 aa14.63□□□□□ -0.07
LINC00339-210ENST00000635675 IQGAP3Q86VI3 1631 aa14.63□□□□□ -0.07
LINC00339-210ENST00000635675 EFCAB6Q5THR3 1501 aa14.62□□□□□ -0.07
LINC00339-210ENST00000635675 MYO3AQ8NEV4 1616 aa14.62□□□□□ -0.07
LINC00339-210ENST00000635675 TET3O43151 1660 aa14.62□□□□□ -0.07
LINC00339-210ENST00000635675 ZNF142P52746 1687 aaPredicted RBP14.6□□□□□ -0.07
LINC00339-210ENST00000635675 CEP170BQ9Y4F5 1589 aaPredicted RBP14.59□□□□□ -0.07
LINC00339-210ENST00000635675 A2ML1A8K2U0 1454 aa14.59□□□□□ -0.07
LINC00339-210ENST00000635675 RPRD2Q5VT52 1461 aaKnown RBP14.59□□□□□ -0.07
LINC00339-210ENST00000635675 NLRP1Q9C000 1473 aa14.59□□□□□ -0.07
LINC00339-210ENST00000635675 NOS1P29475 1434 aa14.58□□□□□ -0.08
LINC00339-210ENST00000635675 SETD5Q9C0A6 1442 aa14.58□□□□□ -0.08
LINC00339-210ENST00000635675 E9PCH4 1651 aa14.57□□□□□ -0.08
LINC00339-210ENST00000635675 TRIM52Q96A61 297 aa14.57□□□□□ -0.08
LINC00339-210ENST00000635675 PHF23Q9BUL5 403 aaPredicted RBP14.55□□□□□ -0.08
LINC00339-210ENST00000635675 SYNMO15061 1565 aa14.54□□□□□ -0.08
LINC00339-210ENST00000635675 IDI1Q13907 227 aa14.54□□□□□ -0.08
LINC00339-210ENST00000635675 THEMISQ8N1K5 641 aaPredicted RBP14.54□□□□□ -0.08
LINC00339-210ENST00000635675 STRCQ7RTU9 1775 aa14.54□□□□□ -0.08
LINC00339-210ENST00000635675 ACIN1Q9UKV3 1341 aaKnown RBP14.53□□□□□ -0.08
LINC00339-210ENST00000635675 SLC52A1Q9NWF4 448 aa14.53□□□□□ -0.08
LINC00339-210ENST00000635675 UGGT1Q9NYU2 1555 aa14.53□□□□□ -0.08
LINC00339-210ENST00000635675 PLA2R1Q13018 1463 aa14.52□□□□□ -0.08
LINC00339-210ENST00000635675 RAB3GAP2Q9H2M9 1393 aa14.52□□□□□ -0.09
LINC00339-210ENST00000635675 PKD2Q13563 968 aa14.51□□□□□ -0.09
LINC00339-210ENST00000635675 SLC4A1APQ9BWU0 796 aaKnown RBP14.51□□□□□ -0.09
LINC00339-210ENST00000635675 PIK3C2BO00750 1634 aa14.5□□□□□ -0.09
LINC00339-210ENST00000635675 HRCP23327 699 aa14.5□□□□□ -0.09
LINC00339-210ENST00000635675 UBR1Q8IWV7 1749 aa14.5□□□□□ -0.09
LINC00339-210ENST00000635675 PTPRTO14522 1441 aa14.5□□□□□ -0.09
LINC00339-210ENST00000635675 NCKAP5LQ9HCH0 1330 aa14.49□□□□□ -0.09
LINC00339-210ENST00000635675 MPHOSPH9Q99550 1183 aa14.49□□□□□ -0.09
LINC00339-210ENST00000635675 DMRT2Q9Y5R5 561 aa14.49□□□□□ -0.09
LINC00339-210ENST00000635675 KDM5AP29375 1690 aaKnown RBP14.48□□□□□ -0.09
LINC00339-210ENST00000635675 ANKLE2Q86XL3 938 aa14.47□□□□□ -0.09
LINC00339-210ENST00000635675 SPHKAPQ2M3C7 1700 aa14.46□□□□□ -0.09
LINC00339-210ENST00000635675 TRIM26Q12899 539 aaPredicted RBP14.46□□□□□ -0.09
LINC00339-210ENST00000635675 STAG3Q9UJ98 1225 aa14.46□□□□□ -0.09
LINC00339-210ENST00000635675 ARHGAP23Q9P227 1491 aa14.46□□□□□ -0.1
LINC00339-210ENST00000635675 ADGRB3O60242 1522 aa14.45□□□□□ -0.1
LINC00339-210ENST00000635675 SLIT1O75093 1534 aa14.45□□□□□ -0.1
LINC00339-210ENST00000635675 TMEM2Q9UHN6 1383 aa14.44□□□□□ -0.1
LINC00339-210ENST00000635675 FOXD1Q16676 465 aa14.44□□□□□ -0.1
LINC00339-210ENST00000635675 TMEM131LA2VDJ0 1609 aa14.44□□□□□ -0.1
LINC00339-210ENST00000635675 TRPM2O94759 1503 aa14.44□□□□□ -0.1
LINC00339-210ENST00000635675 LTKP29376 864 aa14.43□□□□□ -0.1
LINC00339-210ENST00000635675 NEURL4Q96JN8 1562 aa14.43□□□□□ -0.1
LINC00339-210ENST00000635675 MED14O60244 1454 aa14.42□□□□□ -0.1
LINC00339-210ENST00000635675 POLR1AO95602 1720 aaPredicted RBP14.42□□□□□ -0.1
LINC00339-210ENST00000635675 MYO5BQ9ULV0 1848 aa14.41□□□□□ -0.1
LINC00339-210ENST00000635675 TXNDC2Q86VQ3 553 aa14.41□□□□□ -0.1
LINC00339-210ENST00000635675 CHGAP10645 457 aaKnown RBP14.41□□□□□ -0.1
LINC00339-210ENST00000635675 SCAF11Q99590 1463 aaKnown RBP14.4□□□□□ -0.1
LINC00339-210ENST00000635675 CLTCL1P53675 1640 aa14.4□□□□□ -0.1
LINC00339-210ENST00000635675 EID1Q9Y6B2 187 aa14.4□□□□□ -0.1
LINC00339-210ENST00000635675 NPHP4O75161 1426 aaPredicted RBP14.39□□□□□ -0.11
LINC00339-210ENST00000635675 ZFYVE9O95405 1425 aa14.39□□□□□ -0.11
LINC00339-210ENST00000635675 RIMS2Q9UQ26 1411 aa14.37□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms