RNA–Protein interactions for RNA: ENST00000635347.1

SPOCK1-211, Transcript of SPARC (osteonectin), cwcv and kazal like domains proteoglycan 1, humanhuman

TSL 5

Gene SPOCK1, Length 648 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPOCK1-211ENST00000635347 SCAF1Q9H7N4 1312 aaKnown RBP12.4□□□□□ -0.42
SPOCK1-211ENST00000635347 PHF23Q9BUL5 403 aaPredicted RBP12.4□□□□□ -0.42
SPOCK1-211ENST00000635347 FAM135AQ9P2D6 1515 aa12.4□□□□□ -0.42
SPOCK1-211ENST00000635347 LRRC9Q6ZRR7 1453 aa12.4□□□□□ -0.43
SPOCK1-211ENST00000635347 PPP6R1Q9UPN7 881 aa12.39□□□□□ -0.43
SPOCK1-211ENST00000635347 MBD5Q9P267 1494 aa12.39□□□□□ -0.43
SPOCK1-211ENST00000635347 RSPH4AQ5TD94 716 aa12.38□□□□□ -0.43
SPOCK1-211ENST00000635347 ZC3H13Q5T200 1668 aaKnown RBP12.37□□□□□ -0.43
SPOCK1-211ENST00000635347 CROCC2H7BZ55 1655 aa12.36□□□□□ -0.43
SPOCK1-211ENST00000635347 MAST1Q9Y2H9 1570 aa12.36□□□□□ -0.43
SPOCK1-211ENST00000635347 CEP170BQ9Y4F5 1589 aaPredicted RBP12.36□□□□□ -0.43
SPOCK1-211ENST00000635347 EIF2AK4Q9P2K8 1649 aaKnown RBP12.36□□□□□ -0.43
SPOCK1-211ENST00000635347 ZNF644Q9H582 1327 aaPredicted RBP12.36□□□□□ -0.43
SPOCK1-211ENST00000635347 POLR1AO95602 1720 aaPredicted RBP12.35□□□□□ -0.43
SPOCK1-211ENST00000635347 KDM5DQ9BY66 1539 aa12.35□□□□□ -0.43
SPOCK1-211ENST00000635347 PTPRKQ15262 1439 aa12.35□□□□□ -0.43
SPOCK1-211ENST00000635347 CPS1P31327 1500 aa12.34□□□□□ -0.43
SPOCK1-211ENST00000635347 GGT6Q6P531 493 aa12.34□□□□□ -0.43
SPOCK1-211ENST00000635347 LOC105371045A0A1W2PR82 267 aa12.33□□□□□ -0.44
SPOCK1-211ENST00000635347 TSPY4P0CV99 314 aa12.33□□□□□ -0.44
SPOCK1-211ENST00000635347 TSPY10P0CW01 314 aa12.33□□□□□ -0.44
SPOCK1-211ENST00000635347 APLP2Q06481 763 aa12.33□□□□□ -0.44
SPOCK1-211ENST00000635347 DHX29Q7Z478 1369 aaKnown RBP12.32□□□□□ -0.44
SPOCK1-211ENST00000635347 MIA2Q96PC5 1412 aa12.32□□□□□ -0.44
SPOCK1-211ENST00000635347 RNF17Q9BXT8 1623 aaKnown RBP12.32□□□□□ -0.44
SPOCK1-211ENST00000635347 SHANK2Q9UPX8 1470 aa12.32□□□□□ -0.44
SPOCK1-211ENST00000635347 MYOM3Q5VTT5 1437 aa12.31□□□□□ -0.44
SPOCK1-211ENST00000635347 ALKQ9UM73 1620 aa12.31□□□□□ -0.44
SPOCK1-211ENST00000635347 RGS17Q9UGC6 210 aaPredicted RBP12.31□□□□□ -0.44
SPOCK1-211ENST00000635347 PTPN23Q9H3S7 1636 aa12.3□□□□□ -0.44
SPOCK1-211ENST00000635347 CEP152O94986 1710 aa12.3□□□□□ -0.44
SPOCK1-211ENST00000635347 DNMT1P26358 1616 aaKnown RBP12.29□□□□□ -0.44
SPOCK1-211ENST00000635347 A2ML1A8K2U0 1454 aa12.29□□□□□ -0.44
SPOCK1-211ENST00000635347 KIF3BO15066 747 aa12.28□□□□□ -0.44
SPOCK1-211ENST00000635347 CFAP65Q6ZU64 1925 aaKnown RBP12.28□□□□□ -0.44
SPOCK1-211ENST00000635347 PZPP20742 1482 aa12.27□□□□□ -0.44
SPOCK1-211ENST00000635347 NEURL4Q96JN8 1562 aa12.27□□□□□ -0.44
SPOCK1-211ENST00000635347 DUOX2Q9NRD8 1548 aa12.27□□□□□ -0.45
SPOCK1-211ENST00000635347 WASHC2CQ9Y4E1 1318 aa12.25□□□□□ -0.45
SPOCK1-211ENST00000635347 VWDEQ8N2E2 1590 aa12.25□□□□□ -0.45
SPOCK1-211ENST00000635347 KANK4Q5T7N3 995 aaPredicted RBP12.24□□□□□ -0.45
SPOCK1-211ENST00000635347 ANKLE2Q86XL3 938 aa12.24□□□□□ -0.45
SPOCK1-211ENST00000635347 TNRQ92752 1358 aa12.23□□□□□ -0.45
SPOCK1-211ENST00000635347 SENP3Q9H4L4 574 aaPredicted RBP12.23□□□□□ -0.45
SPOCK1-211ENST00000635347 DEPDC5O75140 1603 aa12.22□□□□□ -0.45
SPOCK1-211ENST00000635347 ABCC3O15438 1527 aa12.22□□□□□ -0.45
SPOCK1-211ENST00000635347 NLRP1Q9C000 1473 aa12.22□□□□□ -0.45
SPOCK1-211ENST00000635347 FBXO31Q5XUX0 539 aaPredicted RBP12.22□□□□□ -0.45
SPOCK1-211ENST00000635347 MROH1Q8NDA8 1641 aa12.22□□□□□ -0.45
SPOCK1-211ENST00000635347 UGGT1Q9NYU2 1555 aa12.22□□□□□ -0.45
SPOCK1-211ENST00000635347 PRDM15P57071 1507 aaPredicted RBP12.21□□□□□ -0.45
SPOCK1-211ENST00000635347 MED14O60244 1454 aa12.21□□□□□ -0.45
SPOCK1-211ENST00000635347 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP12.21□□□□□ -0.45
SPOCK1-211ENST00000635347 THEMISQ8N1K5 641 aaPredicted RBP12.21□□□□□ -0.45
SPOCK1-211ENST00000635347 FGD6Q6ZV73 1430 aa12.2□□□□□ -0.46
SPOCK1-211ENST00000635347 ERBINQ96RT1 1412 aa12.2□□□□□ -0.46
SPOCK1-211ENST00000635347 POTEAQ6S8J7 498 aa12.2□□□□□ -0.46
SPOCK1-211ENST00000635347 NPHP4O75161 1426 aaPredicted RBP12.2□□□□□ -0.46
SPOCK1-211ENST00000635347 IQGAP1P46940 1657 aa12.19□□□□□ -0.46
SPOCK1-211ENST00000635347 LRRC7Q96NW7 1537 aa12.19□□□□□ -0.46
SPOCK1-211ENST00000635347 UBR1Q8IWV7 1749 aa12.19□□□□□ -0.46
SPOCK1-211ENST00000635347 DAPK1P53355 1430 aa12.19□□□□□ -0.46
SPOCK1-211ENST00000635347 STRCP1A6NGW2 1772 aa12.18□□□□□ -0.46
SPOCK1-211ENST00000635347 KIF15Q9NS87 1388 aa12.18□□□□□ -0.46
SPOCK1-211ENST00000635347 ABCC5O15440 1437 aa12.17□□□□□ -0.46
SPOCK1-211ENST00000635347 ERVK-7P63135 1459 aa12.16□□□□□ -0.46
SPOCK1-211ENST00000635347 KANK1Q14678 1352 aa12.16□□□□□ -0.46
SPOCK1-211ENST00000635347 KDM5AP29375 1690 aaKnown RBP12.16□□□□□ -0.46
SPOCK1-211ENST00000635347 ANKRD30AQ9BXX3 1397 aa12.15□□□□□ -0.46
SPOCK1-211ENST00000635347 SYNMO15061 1565 aa12.13□□□□□ -0.47
SPOCK1-211ENST00000635347 ARHGAP31Q2M1Z3 1444 aa12.12□□□□□ -0.47
SPOCK1-211ENST00000635347 PIK3C2BO00750 1634 aa12.12□□□□□ -0.47
SPOCK1-211ENST00000635347 ADGRL2O95490 1459 aa12.12□□□□□ -0.47
SPOCK1-211ENST00000635347 GCC2Q8IWJ2 1684 aa12.12□□□□□ -0.47
SPOCK1-211ENST00000635347 RRP7BPQ9NSQ0 103 aa12.11□□□□□ -0.47
SPOCK1-211ENST00000635347 LMTK2Q8IWU2 1503 aa12.11□□□□□ -0.47
SPOCK1-211ENST00000635347 FAM135BQ49AJ0 1406 aa12.11□□□□□ -0.47
SPOCK1-211ENST00000635347 EFCAB6Q5THR3 1501 aa12.1□□□□□ -0.47
SPOCK1-211ENST00000635347 TET3O43151 1660 aa12.1□□□□□ -0.47
SPOCK1-211ENST00000635347 FAM50AQ14320 339 aaKnown RBP12.08□□□□□ -0.48
SPOCK1-211ENST00000635347 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.08□□□□□ -0.48
SPOCK1-211ENST00000635347 MYO5BQ9ULV0 1848 aa12.08□□□□□ -0.48
SPOCK1-211ENST00000635347 SLIT1O75093 1534 aa12.07□□□□□ -0.48
SPOCK1-211ENST00000635347 UNC13BO14795 1591 aa12.07□□□□□ -0.48
SPOCK1-211ENST00000635347 CHIC2Q9UKJ5 165 aa12.07□□□□□ -0.48
SPOCK1-211ENST00000635347 SCAF11Q99590 1463 aaKnown RBP12.07□□□□□ -0.48
SPOCK1-211ENST00000635347 XIRP1Q702N8 1843 aaKnown RBP12.07□□□□□ -0.48
SPOCK1-211ENST00000635347 SETD1AO15047 1707 aaKnown RBP12.06□□□□□ -0.48
SPOCK1-211ENST00000635347 UPF1Q92900 1129 aaKnown RBP eCLIP12.06□□□□□ -0.48
SPOCK1-211ENST00000635347 ANKRD50Q9ULJ7 1429 aa12.05□□□□□ -0.48
SPOCK1-211ENST00000635347 STAG3Q9UJ98 1225 aa12.05□□□□□ -0.48
SPOCK1-211ENST00000635347 RPRD2Q5VT52 1461 aaKnown RBP12.05□□□□□ -0.48
SPOCK1-211ENST00000635347 ADGRB3O60242 1522 aa12.05□□□□□ -0.48
SPOCK1-211ENST00000635347 ARHGAP23Q9P227 1491 aa12.04□□□□□ -0.48
SPOCK1-211ENST00000635347 LTKP29376 864 aa12.03□□□□□ -0.48
SPOCK1-211ENST00000635347 EID1Q9Y6B2 187 aa12.03□□□□□ -0.48
SPOCK1-211ENST00000635347 IQGAP3Q86VI3 1631 aa12.03□□□□□ -0.48
SPOCK1-211ENST00000635347 E9PCH4 1651 aa12.02□□□□□ -0.49
SPOCK1-211ENST00000635347 TXNDC2Q86VQ3 553 aa12.01□□□□□ -0.49
SPOCK1-211ENST00000635347 ROBO1Q9Y6N7 1651 aa12□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms