RNA–Protein interactions for RNA: ENST00000633627.1

CROCCP4-202, Transcript of ciliary rootlet coiled-coil, rootletin pseudogene 4, humanhuman

TSL 3 BASIC

Gene CROCCP4, Length 573 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CROCCP4-202ENST00000633627 ANKRD50Q9ULJ7 1429 aa29.41■■■□□ 2.3
CROCCP4-202ENST00000633627 MROH1Q8NDA8 1641 aa29.38■■■□□ 2.29
CROCCP4-202ENST00000633627 CNTLNQ9NXG0 1405 aa29.37■■■□□ 2.29
CROCCP4-202ENST00000633627 ESF1Q9H501 851 aaKnown RBP29.34■■■□□ 2.29
CROCCP4-202ENST00000633627 FAM135AQ9P2D6 1515 aa29.34■■■□□ 2.29
CROCCP4-202ENST00000633627 DEPDC5O75140 1603 aa29.34■■■□□ 2.29
CROCCP4-202ENST00000633627 NAIPQ13075 1403 aa29.33■■■□□ 2.29
CROCCP4-202ENST00000633627 AEBP2Q6ZN18 517 aaPredicted RBP29.31■■■□□ 2.28
CROCCP4-202ENST00000633627 MROH2AA6NES4 1674 aa29.31■■■□□ 2.28
CROCCP4-202ENST00000633627 CLTCQ00610 1675 aaKnown RBP29.31■■■□□ 2.28
CROCCP4-202ENST00000633627 PRDM15P57071 1507 aaPredicted RBP29.3■■■□□ 2.28
CROCCP4-202ENST00000633627 HFM1A2PYH4 1435 aa29.3■■■□□ 2.28
CROCCP4-202ENST00000633627 KDM5DQ9BY66 1539 aa29.3■■■□□ 2.28
CROCCP4-202ENST00000633627 WASHC2CQ9Y4E1 1318 aa29.28■■■□□ 2.28
CROCCP4-202ENST00000633627 ZMYM3Q14202 1370 aa29.27■■■□□ 2.28
CROCCP4-202ENST00000633627 CEBPAP49715 358 aaPredicted RBP29.27■■■□□ 2.28
CROCCP4-202ENST00000633627 GCC2Q8IWJ2 1684 aa29.27■■■□□ 2.28
CROCCP4-202ENST00000633627 ABCC3O15438 1527 aa29.26■■■□□ 2.27
CROCCP4-202ENST00000633627 C3P01024 1663 aa29.26■■■□□ 2.27
CROCCP4-202ENST00000633627 VWDEQ8N2E2 1590 aa29.24■■■□□ 2.27
CROCCP4-202ENST00000633627 GRWD1Q9BQ67 446 aaKnown RBP eCLIP29.24■■■□□ 2.27
CROCCP4-202ENST00000633627 ZC3H13Q5T200 1668 aaKnown RBP29.23■■■□□ 2.27
CROCCP4-202ENST00000633627 UNC13BO14795 1591 aa29.22■■■□□ 2.27
CROCCP4-202ENST00000633627 KANK1Q14678 1352 aa29.21■■■□□ 2.27
CROCCP4-202ENST00000633627 PLPPR3Q6T4P5 718 aa29.2■■■□□ 2.26
CROCCP4-202ENST00000633627 CEP152O94986 1710 aa29.2■■■□□ 2.26
CROCCP4-202ENST00000633627 LMTK2Q8IWU2 1503 aa29.18■■■□□ 2.26
CROCCP4-202ENST00000633627 SETD1BQ9UPS6 1966 aaKnown RBP29.15■■■□□ 2.26
CROCCP4-202ENST00000633627 PZPP20742 1482 aa29.15■■■□□ 2.26
CROCCP4-202ENST00000633627 CAMSAP1Q5T5Y3 1602 aa29.14■■■□□ 2.26
CROCCP4-202ENST00000633627 NPATQ14207 1427 aa29.13■■■□□ 2.25
CROCCP4-202ENST00000633627 ARHGAP31Q2M1Z3 1444 aa29.12■■■□□ 2.25
CROCCP4-202ENST00000633627 NUP155O75694 1391 aa29.11■■■□□ 2.25
CROCCP4-202ENST00000633627 SETD5Q9C0A6 1442 aa29.1■■■□□ 2.25
CROCCP4-202ENST00000633627 IQGAP3Q86VI3 1631 aa29.09■■■□□ 2.25
CROCCP4-202ENST00000633627 FBXO31Q5XUX0 539 aaPredicted RBP29.09■■■□□ 2.25
CROCCP4-202ENST00000633627 EFCAB6Q5THR3 1501 aa29.06■■■□□ 2.24
CROCCP4-202ENST00000633627 TET3O43151 1660 aa29.05■■■□□ 2.24
CROCCP4-202ENST00000633627 CFAP65Q6ZU64 1925 aaKnown RBP29.02■■■□□ 2.24
CROCCP4-202ENST00000633627 SPATA31D1Q6ZQQ2 1576 aa29.02■■■□□ 2.24
CROCCP4-202ENST00000633627 ERVK-7P63135 1459 aa29.02■■■□□ 2.24
CROCCP4-202ENST00000633627 PREX1Q8TCU6 1659 aa29.02■■■□□ 2.24
CROCCP4-202ENST00000633627 TRIM26Q12899 539 aaPredicted RBP29.01■■■□□ 2.23
CROCCP4-202ENST00000633627 TNRQ92752 1358 aa29.01■■■□□ 2.23
CROCCP4-202ENST00000633627 RAB3GAP2Q9H2M9 1393 aa29.01■■■□□ 2.23
CROCCP4-202ENST00000633627 LMTK3Q96Q04 1460 aa29■■■□□ 2.23
CROCCP4-202ENST00000633627 TRIM52Q96A61 297 aa28.99■■■□□ 2.23
CROCCP4-202ENST00000633627 RPRD2Q5VT52 1461 aaKnown RBP28.98■■■□□ 2.23
CROCCP4-202ENST00000633627 UHRF1BP1Q6BDS2 1440 aa28.98■■■□□ 2.23
CROCCP4-202ENST00000633627 ACIN1Q9UKV3 1341 aaKnown RBP28.96■■■□□ 2.23
CROCCP4-202ENST00000633627 E9PCH4 1651 aa28.96■■■□□ 2.23
CROCCP4-202ENST00000633627 NOS1P29475 1434 aa28.94■■■□□ 2.22
CROCCP4-202ENST00000633627 HRCP23327 699 aa28.94■■■□□ 2.22
CROCCP4-202ENST00000633627 MYO3AQ8NEV4 1616 aa28.94■■■□□ 2.22
CROCCP4-202ENST00000633627 NLRP1Q9C000 1473 aa28.9■■■□□ 2.22
CROCCP4-202ENST00000633627 ZNF142P52746 1687 aaPredicted RBP28.89■■■□□ 2.21
CROCCP4-202ENST00000633627 SLC4A1APQ9BWU0 796 aaKnown RBP28.88■■■□□ 2.21
CROCCP4-202ENST00000633627 A2ML1A8K2U0 1454 aa28.88■■■□□ 2.21
CROCCP4-202ENST00000633627 SYNMO15061 1565 aa28.88■■■□□ 2.21
CROCCP4-202ENST00000633627 CEP170BQ9Y4F5 1589 aaPredicted RBP28.88■■■□□ 2.21
CROCCP4-202ENST00000633627 HSPA2P54652 639 aa28.85■■■□□ 2.21
CROCCP4-202ENST00000633627 PKD2Q13563 968 aa28.85■■■□□ 2.21
CROCCP4-202ENST00000633627 MPHOSPH9Q99550 1183 aa28.85■■■□□ 2.21
CROCCP4-202ENST00000633627 PTPRTO14522 1441 aa28.82■■■□□ 2.2
CROCCP4-202ENST00000633627 IDI1Q13907 227 aa28.81■■■□□ 2.2
CROCCP4-202ENST00000633627 SLC52A1Q9NWF4 448 aa28.8■■■□□ 2.2
CROCCP4-202ENST00000633627 SPHKAPQ2M3C7 1700 aa28.77■■■□□ 2.2
CROCCP4-202ENST00000633627 UGGT1Q9NYU2 1555 aa28.77■■■□□ 2.2
CROCCP4-202ENST00000633627 PLA2R1Q13018 1463 aa28.77■■■□□ 2.2
CROCCP4-202ENST00000633627 PIK3C2BO00750 1634 aa28.76■■■□□ 2.2
CROCCP4-202ENST00000633627 FOXD1Q16676 465 aa28.73■■■□□ 2.19
CROCCP4-202ENST00000633627 UBR1Q8IWV7 1749 aa28.73■■■□□ 2.19
CROCCP4-202ENST00000633627 THEMISQ8N1K5 641 aaPredicted RBP28.73■■■□□ 2.19
CROCCP4-202ENST00000633627 TRPM2O94759 1503 aa28.72■■■□□ 2.19
CROCCP4-202ENST00000633627 KDM5AP29375 1690 aaKnown RBP28.71■■■□□ 2.19
CROCCP4-202ENST00000633627 ADGRB3O60242 1522 aa28.68■■■□□ 2.18
CROCCP4-202ENST00000633627 STRCQ7RTU9 1775 aa28.67■■■□□ 2.18
CROCCP4-202ENST00000633627 STAG3Q9UJ98 1225 aa28.65■■■□□ 2.18
CROCCP4-202ENST00000633627 TMEM131LA2VDJ0 1609 aa28.65■■■□□ 2.18
CROCCP4-202ENST00000633627 CLTCL1P53675 1640 aa28.65■■■□□ 2.18
CROCCP4-202ENST00000633627 ARHGAP23Q9P227 1491 aa28.63■■■□□ 2.17
CROCCP4-202ENST00000633627 SLIT1O75093 1534 aa28.62■■■□□ 2.17
CROCCP4-202ENST00000633627 PCGF6Q9BYE7 350 aa28.61■■■□□ 2.17
CROCCP4-202ENST00000633627 NCKAP5LQ9HCH0 1330 aa28.61■■■□□ 2.17
CROCCP4-202ENST00000633627 TMEM2Q9UHN6 1383 aa28.61■■■□□ 2.17
CROCCP4-202ENST00000633627 MYO5BQ9ULV0 1848 aa28.6■■■□□ 2.17
CROCCP4-202ENST00000633627 ANKLE2Q86XL3 938 aa28.58■■■□□ 2.17
CROCCP4-202ENST00000633627 ANKRD30BQ9BXX2 1392 aa28.58■■■□□ 2.17
CROCCP4-202ENST00000633627 CHGAP10645 457 aaKnown RBP28.57■■■□□ 2.16
CROCCP4-202ENST00000633627 CCDC144AA2RUR9 1427 aa28.55■■■□□ 2.16
CROCCP4-202ENST00000633627 LTKP29376 864 aa28.55■■■□□ 2.16
CROCCP4-202ENST00000633627 POLR1AO95602 1720 aaPredicted RBP28.55■■■□□ 2.16
CROCCP4-202ENST00000633627 NEURL4Q96JN8 1562 aa28.54■■■□□ 2.16
CROCCP4-202ENST00000633627 KIF1BO60333 1816 aa28.53■■■□□ 2.16
CROCCP4-202ENST00000633627 DMRT2Q9Y5R5 561 aa28.53■■■□□ 2.16
CROCCP4-202ENST00000633627 ZFYVE9O95405 1425 aa28.52■■■□□ 2.16
CROCCP4-202ENST00000633627 TXNDC2Q86VQ3 553 aa28.52■■■□□ 2.16
CROCCP4-202ENST00000633627 MED14O60244 1454 aa28.52■■■□□ 2.16
CROCCP4-202ENST00000633627 SCAF11Q99590 1463 aaKnown RBP28.52■■■□□ 2.16
CROCCP4-202ENST00000633627 EID1Q9Y6B2 187 aa28.5■■■□□ 2.15
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms