RNA–Protein interactions for RNA: ENST00000631247.1

UBE3A-223, Transcript of ubiquitin protein ligase E3A, humanhuman

TSL 5

Gene UBE3A, Length 789 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3A-223ENST00000631247 CERKQ8TCT0 537 aa16.48■□□□□ 0.23
UBE3A-223ENST00000631247 CAMSAP2Q08AD1 1489 aa16.48■□□□□ 0.23
UBE3A-223ENST00000631247 GGT6Q6P531 493 aa16.47■□□□□ 0.23
UBE3A-223ENST00000631247 CCDC141Q6ZP82 1450 aa16.47■□□□□ 0.23
UBE3A-223ENST00000631247 MBD5Q9P267 1494 aa16.47■□□□□ 0.23
UBE3A-223ENST00000631247 VPS8Q8N3P4 1428 aa16.46■□□□□ 0.23
UBE3A-223ENST00000631247 ZMYM3Q14202 1370 aa16.46■□□□□ 0.23
UBE3A-223ENST00000631247 MYO3AQ8NEV4 1616 aa16.45■□□□□ 0.22
UBE3A-223ENST00000631247 RTEL1-TNFRSF6BF6WH68 1400 aa16.45■□□□□ 0.22
UBE3A-223ENST00000631247 CAMSAP1Q5T5Y3 1602 aa16.43■□□□□ 0.22
UBE3A-223ENST00000631247 PTPRTO14522 1441 aa16.43■□□□□ 0.22
UBE3A-223ENST00000631247 NCOA1Q15788 1441 aa16.43■□□□□ 0.22
UBE3A-223ENST00000631247 ZNF142P52746 1687 aaPredicted RBP16.43■□□□□ 0.22
UBE3A-223ENST00000631247 LRRC9Q6ZRR7 1453 aa16.42■□□□□ 0.22
UBE3A-223ENST00000631247 ARHGEF5Q12774 1597 aa16.4■□□□□ 0.22
UBE3A-223ENST00000631247 CEP170BQ9Y4F5 1589 aaPredicted RBP16.4■□□□□ 0.22
UBE3A-223ENST00000631247 LOC105371045A0A1W2PR82 267 aa16.4■□□□□ 0.22
UBE3A-223ENST00000631247 DHX29Q7Z478 1369 aaKnown RBP16.39■□□□□ 0.21
UBE3A-223ENST00000631247 PTPRKQ15262 1439 aa16.39■□□□□ 0.21
UBE3A-223ENST00000631247 RSPH4AQ5TD94 716 aa16.39■□□□□ 0.21
UBE3A-223ENST00000631247 SAMD1Q6SPF0 538 aaPredicted RBP16.39■□□□□ 0.21
UBE3A-223ENST00000631247 KDM5DQ9BY66 1539 aa16.38■□□□□ 0.21
UBE3A-223ENST00000631247 FAM135AQ9P2D6 1515 aa16.37■□□□□ 0.21
UBE3A-223ENST00000631247 KIF3BO15066 747 aa16.37■□□□□ 0.21
UBE3A-223ENST00000631247 TSPY4P0CV99 314 aa16.37■□□□□ 0.21
UBE3A-223ENST00000631247 TSPY10P0CW01 314 aa16.37■□□□□ 0.21
UBE3A-223ENST00000631247 SLC4A1APQ9BWU0 796 aaKnown RBP16.37■□□□□ 0.21
UBE3A-223ENST00000631247 MAP3K1Q13233 1512 aa16.36■□□□□ 0.21
UBE3A-223ENST00000631247 ZNF219Q9P2Y4 722 aaPredicted RBP16.34■□□□□ 0.21
UBE3A-223ENST00000631247 PLA2R1Q13018 1463 aa16.34■□□□□ 0.21
UBE3A-223ENST00000631247 NCKAP5LQ9HCH0 1330 aa16.32■□□□□ 0.2
UBE3A-223ENST00000631247 MAST1Q9Y2H9 1570 aa16.32■□□□□ 0.2
UBE3A-223ENST00000631247 WASHC2CQ9Y4E1 1318 aa16.32■□□□□ 0.2
UBE3A-223ENST00000631247 A2ML1A8K2U0 1454 aa16.31■□□□□ 0.2
UBE3A-223ENST00000631247 PZPP20742 1482 aa16.31■□□□□ 0.2
UBE3A-223ENST00000631247 MYOM3Q5VTT5 1437 aa16.31■□□□□ 0.2
UBE3A-223ENST00000631247 LTBP4Q8N2S1 1624 aa16.3■□□□□ 0.2
UBE3A-223ENST00000631247 MIA2Q96PC5 1412 aa16.3■□□□□ 0.2
UBE3A-223ENST00000631247 TNRQ92752 1358 aa16.3■□□□□ 0.2
UBE3A-223ENST00000631247 POLR1AO95602 1720 aaPredicted RBP16.3■□□□□ 0.2
UBE3A-223ENST00000631247 ZC3H13Q5T200 1668 aaKnown RBP16.3■□□□□ 0.2
UBE3A-223ENST00000631247 DNMT1P26358 1616 aaKnown RBP16.3■□□□□ 0.2
UBE3A-223ENST00000631247 EIF2AK4Q9P2K8 1649 aaKnown RBP16.3■□□□□ 0.2
UBE3A-223ENST00000631247 TCOF1Q13428 1488 aaKnown RBP16.29■□□□□ 0.2
UBE3A-223ENST00000631247 IQSEC2Q5JU85 1478 aa16.29■□□□□ 0.2
UBE3A-223ENST00000631247 PKD2Q13563 968 aa16.29■□□□□ 0.2
UBE3A-223ENST00000631247 RNF17Q9BXT8 1623 aaKnown RBP16.29■□□□□ 0.2
UBE3A-223ENST00000631247 KANK4Q5T7N3 995 aaPredicted RBP16.28■□□□□ 0.2
UBE3A-223ENST00000631247 MYCNP04198 464 aaPredicted RBP16.27■□□□□ 0.2
UBE3A-223ENST00000631247 CROCC2H7BZ55 1655 aa16.26■□□□□ 0.19
UBE3A-223ENST00000631247 FBXO31Q5XUX0 539 aaPredicted RBP16.25■□□□□ 0.19
UBE3A-223ENST00000631247 ZNF335Q9H4Z2 1342 aaPredicted RBP16.24■□□□□ 0.19
UBE3A-223ENST00000631247 PTPN23Q9H3S7 1636 aa16.24■□□□□ 0.19
UBE3A-223ENST00000631247 ABCC3O15438 1527 aa16.24■□□□□ 0.19
UBE3A-223ENST00000631247 DUOX2Q9NRD8 1548 aa16.24■□□□□ 0.19
UBE3A-223ENST00000631247 NLRP1Q9C000 1473 aa16.23■□□□□ 0.19
UBE3A-223ENST00000631247 CEP152O94986 1710 aa16.22■□□□□ 0.19
UBE3A-223ENST00000631247 SHANK2Q9UPX8 1470 aa16.22■□□□□ 0.19
UBE3A-223ENST00000631247 UGGT1Q9NYU2 1555 aa16.21■□□□□ 0.19
UBE3A-223ENST00000631247 MROH1Q8NDA8 1641 aa16.2■□□□□ 0.18
UBE3A-223ENST00000631247 ABCB7O75027 752 aa16.2■□□□□ 0.18
UBE3A-223ENST00000631247 KIF15Q9NS87 1388 aa16.2■□□□□ 0.18
UBE3A-223ENST00000631247 NEURL4Q96JN8 1562 aa16.2■□□□□ 0.18
UBE3A-223ENST00000631247 THEMISQ8N1K5 641 aaPredicted RBP16.19■□□□□ 0.18
UBE3A-223ENST00000631247 SPATA31D1Q6ZQQ2 1576 aa16.18■□□□□ 0.18
UBE3A-223ENST00000631247 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP16.18■□□□□ 0.18
UBE3A-223ENST00000631247 ERVK-7P63135 1459 aa16.17■□□□□ 0.18
UBE3A-223ENST00000631247 UBAP1LF5GYI3 381 aa16.17■□□□□ 0.18
UBE3A-223ENST00000631247 ANKLE2Q86XL3 938 aa16.17■□□□□ 0.18
UBE3A-223ENST00000631247 FGD6Q6ZV73 1430 aa16.17■□□□□ 0.18
UBE3A-223ENST00000631247 ERBINQ96RT1 1412 aa16.17■□□□□ 0.18
UBE3A-223ENST00000631247 DEPDC5O75140 1603 aa16.16■□□□□ 0.18
UBE3A-223ENST00000631247 PRDM15P57071 1507 aaPredicted RBP16.16■□□□□ 0.18
UBE3A-223ENST00000631247 ABCC5O15440 1437 aa16.16■□□□□ 0.18
UBE3A-223ENST00000631247 DAPK1P53355 1430 aa16.16■□□□□ 0.18
UBE3A-223ENST00000631247 DISP3Q9P2K9 1392 aa16.15■□□□□ 0.18
UBE3A-223ENST00000631247 CPS1P31327 1500 aa16.15■□□□□ 0.18
UBE3A-223ENST00000631247 IQGAP1P46940 1657 aa16.14■□□□□ 0.18
UBE3A-223ENST00000631247 CFAP65Q6ZU64 1925 aaKnown RBP16.14■□□□□ 0.17
UBE3A-223ENST00000631247 RRP7BPQ9NSQ0 103 aa16.14■□□□□ 0.17
UBE3A-223ENST00000631247 FOXD4L1Q9NU39 408 aa16.14■□□□□ 0.17
UBE3A-223ENST00000631247 NPHP4O75161 1426 aaPredicted RBP16.13■□□□□ 0.17
UBE3A-223ENST00000631247 KANK1Q14678 1352 aa16.13■□□□□ 0.17
UBE3A-223ENST00000631247 ANKRD30AQ9BXX3 1397 aa16.12■□□□□ 0.17
UBE3A-223ENST00000631247 UBR1Q8IWV7 1749 aa16.11■□□□□ 0.17
UBE3A-223ENST00000631247 MED14O60244 1454 aa16.11■□□□□ 0.17
UBE3A-223ENST00000631247 VWDEQ8N2E2 1590 aa16.09■□□□□ 0.17
UBE3A-223ENST00000631247 CHIC2Q9UKJ5 165 aa16.08■□□□□ 0.16
UBE3A-223ENST00000631247 ARHGAP31Q2M1Z3 1444 aa16.08■□□□□ 0.16
UBE3A-223ENST00000631247 FAM50AQ14320 339 aaKnown RBP16.06■□□□□ 0.16
UBE3A-223ENST00000631247 SYNMO15061 1565 aa16.05■□□□□ 0.16
UBE3A-223ENST00000631247 SCAF11Q99590 1463 aaKnown RBP16.05■□□□□ 0.16
UBE3A-223ENST00000631247 TOM1O60784 492 aa16.05■□□□□ 0.16
UBE3A-223ENST00000631247 PIK3C2BO00750 1634 aa16.05■□□□□ 0.16
UBE3A-223ENST00000631247 PIP4K2BP78356 416 aa16.04■□□□□ 0.16
UBE3A-223ENST00000631247 STAG3Q9UJ98 1225 aa16.04■□□□□ 0.16
UBE3A-223ENST00000631247 LMTK2Q8IWU2 1503 aa16.04■□□□□ 0.16
UBE3A-223ENST00000631247 ADGRL2O95490 1459 aa16.03■□□□□ 0.16
UBE3A-223ENST00000631247 SLIT1O75093 1534 aa16.03■□□□□ 0.16
UBE3A-223ENST00000631247 EID1Q9Y6B2 187 aa16.02■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms