RNA–Protein interactions for RNA: ENST00000630622.1

CDC42EP4-209, Transcript of CDC42 effector protein 4, humanhuman

TSL 5 BASIC

Gene CDC42EP4, Length 240 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP4-209ENST00000630622 PRDM15P57071 1507 aaPredicted RBP25.02■■□□□ 1.6
CDC42EP4-209ENST00000630622 UNC13BO14795 1591 aa25.01■■□□□ 1.59
CDC42EP4-209ENST00000630622 MADDQ8WXG6 1647 aa25.01■■□□□ 1.59
CDC42EP4-209ENST00000630622 FER1L4A9Z1Z3 1794 aa25.01■■□□□ 1.59
CDC42EP4-209ENST00000630622 GGT6Q6P531 493 aa25■■□□□ 1.59
CDC42EP4-209ENST00000630622 SETD5Q9C0A6 1442 aa24.99■■□□□ 1.59
CDC42EP4-209ENST00000630622 FAM135AQ9P2D6 1515 aa24.97■■□□□ 1.59
CDC42EP4-209ENST00000630622 VWDEQ8N2E2 1590 aa24.97■■□□□ 1.59
CDC42EP4-209ENST00000630622 KDM4FA0A1W2PPD8 638 aa24.96■■□□□ 1.59
CDC42EP4-209ENST00000630622 PPP6R1Q9UPN7 881 aa24.96■■□□□ 1.59
CDC42EP4-209ENST00000630622 KDM5DQ9BY66 1539 aa24.96■■□□□ 1.59
CDC42EP4-209ENST00000630622 CLTCQ00610 1675 aaKnown RBP24.94■■□□□ 1.58
CDC42EP4-209ENST00000630622 ZC3H13Q5T200 1668 aaKnown RBP24.94■■□□□ 1.58
CDC42EP4-209ENST00000630622 RIMS1Q86UR5 1692 aaKnown RBP24.94■■□□□ 1.58
CDC42EP4-209ENST00000630622 CEP152O94986 1710 aa24.94■■□□□ 1.58
CDC42EP4-209ENST00000630622 ABCC3O15438 1527 aa24.93■■□□□ 1.58
CDC42EP4-209ENST00000630622 MROH2AA6NES4 1674 aa24.92■■□□□ 1.58
CDC42EP4-209ENST00000630622 RAB3GAP2Q9H2M9 1393 aa24.92■■□□□ 1.58
CDC42EP4-209ENST00000630622 GRWD1Q9BQ67 446 aaKnown RBP eCLIP24.91■■□□□ 1.58
CDC42EP4-209ENST00000630622 CNTLNQ9NXG0 1405 aa24.91■■□□□ 1.58
CDC42EP4-209ENST00000630622 IQGAP3Q86VI3 1631 aa24.9■■□□□ 1.58
CDC42EP4-209ENST00000630622 LMTK2Q8IWU2 1503 aa24.89■■□□□ 1.57
CDC42EP4-209ENST00000630622 KANK1Q14678 1352 aa24.89■■□□□ 1.57
CDC42EP4-209ENST00000630622 WASHC2CQ9Y4E1 1318 aa24.87■■□□□ 1.57
CDC42EP4-209ENST00000630622 CAMSAP1Q5T5Y3 1602 aa24.86■■□□□ 1.57
CDC42EP4-209ENST00000630622 C3P01024 1663 aa24.86■■□□□ 1.57
CDC42EP4-209ENST00000630622 NUP155O75694 1391 aa24.86■■□□□ 1.57
CDC42EP4-209ENST00000630622 ESF1Q9H501 851 aaKnown RBP24.86■■□□□ 1.57
CDC42EP4-209ENST00000630622 PTPRMP28827 1452 aa24.84■■□□□ 1.57
CDC42EP4-209ENST00000630622 TET3O43151 1660 aa24.84■■□□□ 1.57
CDC42EP4-209ENST00000630622 HRCP23327 699 aa24.83■■□□□ 1.57
CDC42EP4-209ENST00000630622 ZMYM3Q14202 1370 aa24.82■■□□□ 1.56
CDC42EP4-209ENST00000630622 PZPP20742 1482 aa24.82■■□□□ 1.56
CDC42EP4-209ENST00000630622 EFCAB6Q5THR3 1501 aa24.81■■□□□ 1.56
CDC42EP4-209ENST00000630622 PCGF6Q9BYE7 350 aa24.8■■□□□ 1.56
CDC42EP4-209ENST00000630622 ACIN1Q9UKV3 1341 aaKnown RBP24.8■■□□□ 1.56
CDC42EP4-209ENST00000630622 TRIM52Q96A61 297 aa24.79■■□□□ 1.56
CDC42EP4-209ENST00000630622 ARHGAP31Q2M1Z3 1444 aa24.78■■□□□ 1.56
CDC42EP4-209ENST00000630622 E9PCH4 1651 aa24.77■■□□□ 1.56
CDC42EP4-209ENST00000630622 CEBPAP49715 358 aaPredicted RBP24.76■■□□□ 1.55
CDC42EP4-209ENST00000630622 NPATQ14207 1427 aa24.76■■□□□ 1.55
CDC42EP4-209ENST00000630622 CFAP65Q6ZU64 1925 aaKnown RBP24.73■■□□□ 1.55
CDC42EP4-209ENST00000630622 RPRD2Q5VT52 1461 aaKnown RBP24.72■■□□□ 1.55
CDC42EP4-209ENST00000630622 PREX1Q8TCU6 1659 aa24.72■■□□□ 1.55
CDC42EP4-209ENST00000630622 SPATA31D1Q6ZQQ2 1576 aa24.7■■□□□ 1.54
CDC42EP4-209ENST00000630622 ERVK-7P63135 1459 aa24.7■■□□□ 1.54
CDC42EP4-209ENST00000630622 FBXO31Q5XUX0 539 aaPredicted RBP24.69■■□□□ 1.54
CDC42EP4-209ENST00000630622 PLPPR3Q6T4P5 718 aa24.69■■□□□ 1.54
CDC42EP4-209ENST00000630622 SLC4A1APQ9BWU0 796 aaKnown RBP24.69■■□□□ 1.54
CDC42EP4-209ENST00000630622 MPHOSPH9Q99550 1183 aa24.68■■□□□ 1.54
CDC42EP4-209ENST00000630622 NOS1P29475 1434 aa24.65■■□□□ 1.54
CDC42EP4-209ENST00000630622 PKD2Q13563 968 aa24.65■■□□□ 1.54
CDC42EP4-209ENST00000630622 SETD1BQ9UPS6 1966 aaKnown RBP24.65■■□□□ 1.54
CDC42EP4-209ENST00000630622 SPHKAPQ2M3C7 1700 aa24.64■■□□□ 1.53
CDC42EP4-209ENST00000630622 SYNMO15061 1565 aa24.63■■□□□ 1.53
CDC42EP4-209ENST00000630622 TNRQ92752 1358 aa24.62■■□□□ 1.53
CDC42EP4-209ENST00000630622 PTPRTO14522 1441 aa24.61■■□□□ 1.53
CDC42EP4-209ENST00000630622 MYO3AQ8NEV4 1616 aa24.6■■□□□ 1.53
CDC42EP4-209ENST00000630622 PLA2R1Q13018 1463 aa24.58■■□□□ 1.53
CDC42EP4-209ENST00000630622 FOXD1Q16676 465 aa24.58■■□□□ 1.53
CDC42EP4-209ENST00000630622 PIK3C2BO00750 1634 aa24.57■■□□□ 1.52
CDC42EP4-209ENST00000630622 TRPM2O94759 1503 aa24.56■■□□□ 1.52
CDC42EP4-209ENST00000630622 ZNF142P52746 1687 aaPredicted RBP24.55■■□□□ 1.52
CDC42EP4-209ENST00000630622 NLRP1Q9C000 1473 aa24.54■■□□□ 1.52
CDC42EP4-209ENST00000630622 UGGT1Q9NYU2 1555 aa24.54■■□□□ 1.52
CDC42EP4-209ENST00000630622 DHX57Q6P158 1386 aaKnown RBP24.54■■□□□ 1.52
CDC42EP4-209ENST00000630622 CEP170BQ9Y4F5 1589 aaPredicted RBP24.52■■□□□ 1.52
CDC42EP4-209ENST00000630622 UHRF1BP1Q6BDS2 1440 aa24.52■■□□□ 1.52
CDC42EP4-209ENST00000630622 CLTCL1P53675 1640 aa24.51■■□□□ 1.51
CDC42EP4-209ENST00000630622 A2ML1A8K2U0 1454 aa24.5■■□□□ 1.51
CDC42EP4-209ENST00000630622 IDI1Q13907 227 aa24.49■■□□□ 1.51
CDC42EP4-209ENST00000630622 SLC52A1Q9NWF4 448 aa24.49■■□□□ 1.51
CDC42EP4-209ENST00000630622 LMTK3Q96Q04 1460 aa24.49■■□□□ 1.51
CDC42EP4-209ENST00000630622 AEBP2Q6ZN18 517 aaPredicted RBP24.48■■□□□ 1.51
CDC42EP4-209ENST00000630622 ANKRD30BQ9BXX2 1392 aa24.48■■□□□ 1.51
CDC42EP4-209ENST00000630622 KDM5AP29375 1690 aaKnown RBP24.47■■□□□ 1.51
CDC42EP4-209ENST00000630622 UBR1Q8IWV7 1749 aa24.47■■□□□ 1.51
CDC42EP4-209ENST00000630622 ADGRB3O60242 1522 aa24.45■■□□□ 1.5
CDC42EP4-209ENST00000630622 TMEM131LA2VDJ0 1609 aa24.44■■□□□ 1.5
CDC42EP4-209ENST00000630622 MYO5BQ9ULV0 1848 aa24.43■■□□□ 1.5
CDC42EP4-209ENST00000630622 CCDC144AA2RUR9 1427 aa24.42■■□□□ 1.5
CDC42EP4-209ENST00000630622 KIF1BO60333 1816 aa24.41■■□□□ 1.5
CDC42EP4-209ENST00000630622 THEMISQ8N1K5 641 aaPredicted RBP24.34■■□□□ 1.49
CDC42EP4-209ENST00000630622 SPATA31E1Q6ZUB1 1445 aa24.34■■□□□ 1.49
CDC42EP4-209ENST00000630622 NEURL4Q96JN8 1562 aa24.33■■□□□ 1.49
CDC42EP4-209ENST00000630622 HSPA2P54652 639 aa24.33■■□□□ 1.49
CDC42EP4-209ENST00000630622 STAG3Q9UJ98 1225 aa24.33■■□□□ 1.49
CDC42EP4-209ENST00000630622 SLIT1O75093 1534 aa24.33■■□□□ 1.49
CDC42EP4-209ENST00000630622 ARHGAP23Q9P227 1491 aa24.32■■□□□ 1.48
CDC42EP4-209ENST00000630622 CHGAP10645 457 aaKnown RBP24.32■■□□□ 1.48
CDC42EP4-209ENST00000630622 TMEM2Q9UHN6 1383 aa24.3■■□□□ 1.48
CDC42EP4-209ENST00000630622 ZFYVE9O95405 1425 aa24.28■■□□□ 1.48
CDC42EP4-209ENST00000630622 STRCQ7RTU9 1775 aa24.27■■□□□ 1.48
CDC42EP4-209ENST00000630622 POLR1AO95602 1720 aaPredicted RBP24.27■■□□□ 1.48
CDC42EP4-209ENST00000630622 SIN3AQ96ST3 1273 aa24.26■■□□□ 1.47
CDC42EP4-209ENST00000630622 NEXMIFQ5QGS0 1516 aa24.25■■□□□ 1.47
CDC42EP4-209ENST00000630622 IFT172Q9UG01 1749 aa24.25■■□□□ 1.47
CDC42EP4-209ENST00000630622 RIMS2Q9UQ26 1411 aa24.25■■□□□ 1.47
CDC42EP4-209ENST00000630622 CLSPNQ9HAW4 1339 aa24.24■■□□□ 1.47
CDC42EP4-209ENST00000630622 PPLO60437 1756 aa24.24■■□□□ 1.47
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms