RNA–Protein interactions for RNA: ENST00000628810.1

SOX2-OT-249, SOX2 overlapping transcript, humanhuman

TSL 5 BASIC

Gene SOX2-OT, Length 618 nt, Biotype sense overlapping.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2-OT-249ENST00000628810 REREQ9P2R6 1566 aa15.02□□□□□ -0.01
SOX2-OT-249ENST00000628810 DIP2CQ9Y2E4 1556 aa15.02□□□□□ -0.01
SOX2-OT-249ENST00000628810 SPAG9O60271 1321 aaKnown RBP15□□□□□ -0.01
SOX2-OT-249ENST00000628810 YEATS2Q9ULM3 1422 aa15□□□□□ -0.01
SOX2-OT-249ENST00000628810 ROCK1Q13464 1354 aa14.99□□□□□ -0.01
SOX2-OT-249ENST00000628810 ABCB7O75027 752 aa14.98□□□□□ -0.01
SOX2-OT-249ENST00000628810 TSPY4P0CV99 314 aa14.98□□□□□ -0.01
SOX2-OT-249ENST00000628810 TSPY10P0CW01 314 aa14.98□□□□□ -0.01
SOX2-OT-249ENST00000628810 NCOA1Q15788 1441 aa14.97□□□□□ -0.01
SOX2-OT-249ENST00000628810 GCC2Q8IWJ2 1684 aa14.96□□□□□ -0.01
SOX2-OT-249ENST00000628810 ANKRD30AQ9BXX3 1397 aa14.96□□□□□ -0.02
SOX2-OT-249ENST00000628810 DUOX2Q9NRD8 1548 aa14.95□□□□□ -0.02
SOX2-OT-249ENST00000628810 ATP10AO60312 1499 aa14.95□□□□□ -0.02
SOX2-OT-249ENST00000628810 BCORL1Q5H9F3 1711 aa14.95□□□□□ -0.02
SOX2-OT-249ENST00000628810 EIF2AK4Q9P2K8 1649 aaKnown RBP14.94□□□□□ -0.02
SOX2-OT-249ENST00000628810 KIF15Q9NS87 1388 aa14.93□□□□□ -0.02
SOX2-OT-249ENST00000628810 A2MP01023 1474 aa14.93□□□□□ -0.02
SOX2-OT-249ENST00000628810 HFM1A2PYH4 1435 aa14.92□□□□□ -0.02
SOX2-OT-249ENST00000628810 AGLP35573 1532 aa14.92□□□□□ -0.02
SOX2-OT-249ENST00000628810 SIGLEC1Q9BZZ2 1709 aa14.92□□□□□ -0.02
SOX2-OT-249ENST00000628810 TRIM26Q12899 539 aaPredicted RBP14.92□□□□□ -0.02
SOX2-OT-249ENST00000628810 ERBINQ96RT1 1412 aa14.92□□□□□ -0.02
SOX2-OT-249ENST00000628810 DHX29Q7Z478 1369 aaKnown RBP14.9□□□□□ -0.02
SOX2-OT-249ENST00000628810 NAIPQ13075 1403 aa14.9□□□□□ -0.02
SOX2-OT-249ENST00000628810 ITGAEP38570 1179 aa14.89□□□□□ -0.03
SOX2-OT-249ENST00000628810 CHIC2Q9UKJ5 165 aa14.89□□□□□ -0.03
SOX2-OT-249ENST00000628810 RNF17Q9BXT8 1623 aaKnown RBP14.88□□□□□ -0.03
SOX2-OT-249ENST00000628810 DEPDC5O75140 1603 aa14.88□□□□□ -0.03
SOX2-OT-249ENST00000628810 ANKRD50Q9ULJ7 1429 aa14.87□□□□□ -0.03
SOX2-OT-249ENST00000628810 MYT1LQ9UL68 1186 aa14.86□□□□□ -0.03
SOX2-OT-249ENST00000628810 RRP7BPQ9NSQ0 103 aa14.85□□□□□ -0.03
SOX2-OT-249ENST00000628810 UNC13BO14795 1591 aa14.85□□□□□ -0.03
SOX2-OT-249ENST00000628810 MROH1Q8NDA8 1641 aa14.84□□□□□ -0.03
SOX2-OT-249ENST00000628810 PRDM15P57071 1507 aaPredicted RBP14.84□□□□□ -0.03
SOX2-OT-249ENST00000628810 FAM135AQ9P2D6 1515 aa14.84□□□□□ -0.03
SOX2-OT-249ENST00000628810 ZBTB22O15209 634 aa14.84□□□□□ -0.03
SOX2-OT-249ENST00000628810 SETD5Q9C0A6 1442 aa14.82□□□□□ -0.04
SOX2-OT-249ENST00000628810 VWDEQ8N2E2 1590 aa14.81□□□□□ -0.04
SOX2-OT-249ENST00000628810 POLA2Q14181 598 aa14.8□□□□□ -0.04
SOX2-OT-249ENST00000628810 KDM5DQ9BY66 1539 aa14.8□□□□□ -0.04
SOX2-OT-249ENST00000628810 ZC3H13Q5T200 1668 aaKnown RBP14.79□□□□□ -0.04
SOX2-OT-249ENST00000628810 ADAMTSL3P82987 1691 aa14.77□□□□□ -0.04
SOX2-OT-249ENST00000628810 IQGAP3Q86VI3 1631 aa14.77□□□□□ -0.04
SOX2-OT-249ENST00000628810 RAB3GAP2Q9H2M9 1393 aa14.77□□□□□ -0.04
SOX2-OT-249ENST00000628810 LMTK2Q8IWU2 1503 aa14.76□□□□□ -0.05
SOX2-OT-249ENST00000628810 KIF3BO15066 747 aa14.76□□□□□ -0.05
SOX2-OT-249ENST00000628810 ACIN1Q9UKV3 1341 aaKnown RBP14.75□□□□□ -0.05
SOX2-OT-249ENST00000628810 HRCP23327 699 aa14.75□□□□□ -0.05
SOX2-OT-249ENST00000628810 ABCC3O15438 1527 aa14.75□□□□□ -0.05
SOX2-OT-249ENST00000628810 MROH2AA6NES4 1674 aa14.74□□□□□ -0.05
SOX2-OT-249ENST00000628810 FER1L4A9Z1Z3 1794 aa14.73□□□□□ -0.05
SOX2-OT-249ENST00000628810 MADDQ8WXG6 1647 aa14.73□□□□□ -0.05
SOX2-OT-249ENST00000628810 ARID4BQ4LE39 1312 aaPredicted RBP14.72□□□□□ -0.05
SOX2-OT-249ENST00000628810 ATXN8OSP0DMR3 200 aa14.72□□□□□ -0.05
SOX2-OT-249ENST00000628810 ATF5Q9Y2D1 282 aaPredicted RBP14.72□□□□□ -0.05
SOX2-OT-249ENST00000628810 CNTLNQ9NXG0 1405 aa14.72□□□□□ -0.05
SOX2-OT-249ENST00000628810 CEP152O94986 1710 aa14.72□□□□□ -0.05
SOX2-OT-249ENST00000628810 TET3O43151 1660 aa14.71□□□□□ -0.05
SOX2-OT-249ENST00000628810 EFCAB6Q5THR3 1501 aa14.71□□□□□ -0.06
SOX2-OT-249ENST00000628810 CLTCQ00610 1675 aaKnown RBP14.71□□□□□ -0.06
SOX2-OT-249ENST00000628810 CAMSAP1Q5T5Y3 1602 aa14.7□□□□□ -0.06
SOX2-OT-249ENST00000628810 PZPP20742 1482 aa14.7□□□□□ -0.06
SOX2-OT-249ENST00000628810 PCGF6Q9BYE7 350 aa14.7□□□□□ -0.06
SOX2-OT-249ENST00000628810 KANK1Q14678 1352 aa14.7□□□□□ -0.06
SOX2-OT-249ENST00000628810 GGT6Q6P531 493 aa14.69□□□□□ -0.06
SOX2-OT-249ENST00000628810 NUP155O75694 1391 aa14.68□□□□□ -0.06
SOX2-OT-249ENST00000628810 ARHGAP31Q2M1Z3 1444 aa14.67□□□□□ -0.06
SOX2-OT-249ENST00000628810 RIMS1Q86UR5 1692 aaKnown RBP14.67□□□□□ -0.06
SOX2-OT-249ENST00000628810 RPRD2Q5VT52 1461 aaKnown RBP14.66□□□□□ -0.06
SOX2-OT-249ENST00000628810 MLECQ14165 292 aa14.66□□□□□ -0.06
SOX2-OT-249ENST00000628810 E9PCH4 1651 aa14.65□□□□□ -0.06
SOX2-OT-249ENST00000628810 WASHC2CQ9Y4E1 1318 aa14.65□□□□□ -0.06
SOX2-OT-249ENST00000628810 C3P01024 1663 aa14.65□□□□□ -0.06
SOX2-OT-249ENST00000628810 RBM42Q9BTD8 480 aaKnown RBP14.63□□□□□ -0.07
SOX2-OT-249ENST00000628810 NPATQ14207 1427 aa14.63□□□□□ -0.07
SOX2-OT-249ENST00000628810 SPATA31D1Q6ZQQ2 1576 aa14.62□□□□□ -0.07
SOX2-OT-249ENST00000628810 ZBTB12Q9Y330 459 aaPredicted RBP14.62□□□□□ -0.07
SOX2-OT-249ENST00000628810 PTPRMP28827 1452 aa14.62□□□□□ -0.07
SOX2-OT-249ENST00000628810 PREX1Q8TCU6 1659 aa14.61□□□□□ -0.07
SOX2-OT-249ENST00000628810 ZMYM3Q14202 1370 aa14.6□□□□□ -0.07
SOX2-OT-249ENST00000628810 KDM4FA0A1W2PPD8 638 aa14.6□□□□□ -0.07
SOX2-OT-249ENST00000628810 TRIM52Q96A61 297 aa14.6□□□□□ -0.07
SOX2-OT-249ENST00000628810 ERVK-7P63135 1459 aa14.59□□□□□ -0.07
SOX2-OT-249ENST00000628810 ESF1Q9H501 851 aaKnown RBP14.59□□□□□ -0.07
SOX2-OT-249ENST00000628810 NOS1P29475 1434 aa14.58□□□□□ -0.07
SOX2-OT-249ENST00000628810 SPHKAPQ2M3C7 1700 aa14.58□□□□□ -0.07
SOX2-OT-249ENST00000628810 TRPM2O94759 1503 aa14.58□□□□□ -0.08
SOX2-OT-249ENST00000628810 MPHOSPH9Q99550 1183 aa14.58□□□□□ -0.08
SOX2-OT-249ENST00000628810 PTPRTO14522 1441 aa14.58□□□□□ -0.08
SOX2-OT-249ENST00000628810 SYNMO15061 1565 aa14.57□□□□□ -0.08
SOX2-OT-249ENST00000628810 DHX57Q6P158 1386 aaKnown RBP14.57□□□□□ -0.08
SOX2-OT-249ENST00000628810 PIK3C2BO00750 1634 aa14.55□□□□□ -0.08
SOX2-OT-249ENST00000628810 PKD2Q13563 968 aa14.55□□□□□ -0.08
SOX2-OT-249ENST00000628810 PLA2R1Q13018 1463 aa14.55□□□□□ -0.08
SOX2-OT-249ENST00000628810 MYO3AQ8NEV4 1616 aa14.53□□□□□ -0.08
SOX2-OT-249ENST00000628810 ZNF142P52746 1687 aaPredicted RBP14.52□□□□□ -0.09
SOX2-OT-249ENST00000628810 ANKRD30BQ9BXX2 1392 aa14.51□□□□□ -0.09
SOX2-OT-249ENST00000628810 KDM5AP29375 1690 aaKnown RBP14.51□□□□□ -0.09
SOX2-OT-249ENST00000628810 NLRP1Q9C000 1473 aa14.5□□□□□ -0.09
SOX2-OT-249ENST00000628810 TNRQ92752 1358 aa14.5□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms