RNA–Protein interactions for RNA: ENST00000628176.2

MECP2-217, Transcript of methyl-CpG binding protein 2, humanhuman

TSL 3 BASIC

Gene MECP2, Length 1,712 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MECP2-217ENST00000628176 NEUROD1Q13562 356 aa20.68■□□□□ 0.9
MECP2-217ENST00000628176 MLECQ14165 292 aa20.68■□□□□ 0.9
MECP2-217ENST00000628176 KIF3BO15066 747 aa20.67■□□□□ 0.9
MECP2-217ENST00000628176 SETD5Q9C0A6 1442 aa20.67■□□□□ 0.9
MECP2-217ENST00000628176 ARID4BQ4LE39 1312 aaPredicted RBP20.67■□□□□ 0.9
MECP2-217ENST00000628176 RAB3GAP2Q9H2M9 1393 aa20.66■□□□□ 0.9
MECP2-217ENST00000628176 GRWD1Q9BQ67 446 aaKnown RBP eCLIP20.64■□□□□ 0.9
MECP2-217ENST00000628176 GGT6Q6P531 493 aa20.64■□□□□ 0.89
MECP2-217ENST00000628176 ERBINQ96RT1 1412 aa20.63■□□□□ 0.89
MECP2-217ENST00000628176 REREQ9P2R6 1566 aa20.61■□□□□ 0.89
MECP2-217ENST00000628176 DHX57Q6P158 1386 aaKnown RBP20.6■□□□□ 0.89
MECP2-217ENST00000628176 TRIM52Q96A61 297 aa20.58■□□□□ 0.89
MECP2-217ENST00000628176 EIF2AK4Q9P2K8 1649 aaKnown RBP20.57■□□□□ 0.88
MECP2-217ENST00000628176 MROH1Q8NDA8 1641 aa20.56■□□□□ 0.88
MECP2-217ENST00000628176 AGLP35573 1532 aa20.56■□□□□ 0.88
MECP2-217ENST00000628176 BCORL1Q5H9F3 1711 aa20.54■□□□□ 0.88
MECP2-217ENST00000628176 NUP155O75694 1391 aa20.53■□□□□ 0.88
MECP2-217ENST00000628176 RNF17Q9BXT8 1623 aaKnown RBP20.53■□□□□ 0.88
MECP2-217ENST00000628176 DEPDC5O75140 1603 aa20.52■□□□□ 0.88
MECP2-217ENST00000628176 UNC13BO14795 1591 aa20.52■□□□□ 0.88
MECP2-217ENST00000628176 CEP152O94986 1710 aa20.5■□□□□ 0.87
MECP2-217ENST00000628176 CFAP65Q6ZU64 1925 aaKnown RBP20.48■□□□□ 0.87
MECP2-217ENST00000628176 PRDM15P57071 1507 aaPredicted RBP20.48■□□□□ 0.87
MECP2-217ENST00000628176 WASHC2CQ9Y4E1 1318 aa20.48■□□□□ 0.87
MECP2-217ENST00000628176 FOXD1Q16676 465 aa20.47■□□□□ 0.87
MECP2-217ENST00000628176 PLPPR3Q6T4P5 718 aa20.47■□□□□ 0.87
MECP2-217ENST00000628176 PZPP20742 1482 aa20.46■□□□□ 0.87
MECP2-217ENST00000628176 CLTCQ00610 1675 aaKnown RBP20.46■□□□□ 0.87
MECP2-217ENST00000628176 GTF3C3Q9Y5Q9 886 aa20.46■□□□□ 0.87
MECP2-217ENST00000628176 FAM135AQ9P2D6 1515 aa20.45■□□□□ 0.86
MECP2-217ENST00000628176 VWDEQ8N2E2 1590 aa20.45■□□□□ 0.86
MECP2-217ENST00000628176 SLC4A1APQ9BWU0 796 aaKnown RBP20.44■□□□□ 0.86
MECP2-217ENST00000628176 ABCC3O15438 1527 aa20.44■□□□□ 0.86
MECP2-217ENST00000628176 KANK1Q14678 1352 aa20.44■□□□□ 0.86
MECP2-217ENST00000628176 MPHOSPH9Q99550 1183 aa20.44■□□□□ 0.86
MECP2-217ENST00000628176 IQGAP3Q86VI3 1631 aa20.44■□□□□ 0.86
MECP2-217ENST00000628176 MADDQ8WXG6 1647 aa20.44■□□□□ 0.86
MECP2-217ENST00000628176 FER1L4A9Z1Z3 1794 aa20.44■□□□□ 0.86
MECP2-217ENST00000628176 ADAMTSL3P82987 1691 aa20.42■□□□□ 0.86
MECP2-217ENST00000628176 CEBPAP49715 358 aaPredicted RBP20.41■□□□□ 0.86
MECP2-217ENST00000628176 MIER1Q8N108 512 aa20.41■□□□□ 0.86
MECP2-217ENST00000628176 KDM5DQ9BY66 1539 aa20.41■□□□□ 0.86
MECP2-217ENST00000628176 ESF1Q9H501 851 aaKnown RBP20.41■□□□□ 0.86
MECP2-217ENST00000628176 RIMS1Q86UR5 1692 aaKnown RBP20.4■□□□□ 0.86
MECP2-217ENST00000628176 KDM4FA0A1W2PPD8 638 aa20.4■□□□□ 0.86
MECP2-217ENST00000628176 PKD2Q13563 968 aa20.4■□□□□ 0.86
MECP2-217ENST00000628176 CAMSAP1Q5T5Y3 1602 aa20.38■□□□□ 0.85
MECP2-217ENST00000628176 E9PCH4 1651 aa20.37■□□□□ 0.85
MECP2-217ENST00000628176 FBXO31Q5XUX0 539 aaPredicted RBP20.37■□□□□ 0.85
MECP2-217ENST00000628176 TET3O43151 1660 aa20.37■□□□□ 0.85
MECP2-217ENST00000628176 ZMYM3Q14202 1370 aa20.36■□□□□ 0.85
MECP2-217ENST00000628176 LMTK2Q8IWU2 1503 aa20.36■□□□□ 0.85
MECP2-217ENST00000628176 PPP6R1Q9UPN7 881 aa20.36■□□□□ 0.85
MECP2-217ENST00000628176 ZC3H13Q5T200 1668 aaKnown RBP20.35■□□□□ 0.85
MECP2-217ENST00000628176 EFCAB6Q5THR3 1501 aa20.34■□□□□ 0.85
MECP2-217ENST00000628176 NPATQ14207 1427 aa20.34■□□□□ 0.85
MECP2-217ENST00000628176 C3P01024 1663 aa20.33■□□□□ 0.84
MECP2-217ENST00000628176 CNTLNQ9NXG0 1405 aa20.3■□□□□ 0.84
MECP2-217ENST00000628176 MROH2AA6NES4 1674 aa20.29■□□□□ 0.84
MECP2-217ENST00000628176 PTPRMP28827 1452 aa20.27■□□□□ 0.84
MECP2-217ENST00000628176 PLA2R1Q13018 1463 aa20.27■□□□□ 0.84
MECP2-217ENST00000628176 PREX1Q8TCU6 1659 aa20.27■□□□□ 0.83
MECP2-217ENST00000628176 ARHGAP31Q2M1Z3 1444 aa20.26■□□□□ 0.83
MECP2-217ENST00000628176 UGGT1Q9NYU2 1555 aa20.26■□□□□ 0.83
MECP2-217ENST00000628176 SIN3AQ96ST3 1273 aa20.24■□□□□ 0.83
MECP2-217ENST00000628176 TIMELESSQ9UNS1 1208 aa20.24■□□□□ 0.83
MECP2-217ENST00000628176 SPHKAPQ2M3C7 1700 aa20.24■□□□□ 0.83
MECP2-217ENST00000628176 ERVK-7P63135 1459 aa20.23■□□□□ 0.83
MECP2-217ENST00000628176 SYNMO15061 1565 aa20.23■□□□□ 0.83
MECP2-217ENST00000628176 ANKRD30BQ9BXX2 1392 aa20.23■□□□□ 0.83
MECP2-217ENST00000628176 RPRD2Q5VT52 1461 aaKnown RBP20.22■□□□□ 0.83
MECP2-217ENST00000628176 NOS1P29475 1434 aa20.21■□□□□ 0.83
MECP2-217ENST00000628176 PTPRTO14522 1441 aa20.2■□□□□ 0.82
MECP2-217ENST00000628176 SPATA31D1Q6ZQQ2 1576 aa20.19■□□□□ 0.82
MECP2-217ENST00000628176 TNRQ92752 1358 aa20.18■□□□□ 0.82
MECP2-217ENST00000628176 CLTCL1P53675 1640 aa20.18■□□□□ 0.82
MECP2-217ENST00000628176 IDI1Q13907 227 aa20.17■□□□□ 0.82
MECP2-217ENST00000628176 TRPM2O94759 1503 aa20.16■□□□□ 0.82
MECP2-217ENST00000628176 YTHDC1Q96MU7 727 aaKnown RBP20.16■□□□□ 0.82
MECP2-217ENST00000628176 CHGAP10645 457 aaKnown RBP20.14■□□□□ 0.81
MECP2-217ENST00000628176 SETD1BQ9UPS6 1966 aaKnown RBP20.13■□□□□ 0.81
MECP2-217ENST00000628176 CCDC144AA2RUR9 1427 aa20.13■□□□□ 0.81
MECP2-217ENST00000628176 MYO5BQ9ULV0 1848 aa20.12■□□□□ 0.81
MECP2-217ENST00000628176 PIK3C2BO00750 1634 aa20.12■□□□□ 0.81
MECP2-217ENST00000628176 RGL3Q3MIN7 710 aa20.1■□□□□ 0.81
MECP2-217ENST00000628176 MYO3AQ8NEV4 1616 aa20.09■□□□□ 0.81
MECP2-217ENST00000628176 SLC52A1Q9NWF4 448 aa20.09■□□□□ 0.81
MECP2-217ENST00000628176 KIF1BO60333 1816 aa20.07■□□□□ 0.8
MECP2-217ENST00000628176 STAG3Q9UJ98 1225 aa20.06■□□□□ 0.8
MECP2-217ENST00000628176 NUTM2DQ5VT03 806 aaPredicted RBP20.05■□□□□ 0.8
MECP2-217ENST00000628176 SENP3Q9H4L4 574 aaPredicted RBP20.05■□□□□ 0.8
MECP2-217ENST00000628176 TMEM131LA2VDJ0 1609 aa20.04■□□□□ 0.8
MECP2-217ENST00000628176 UBR1Q8IWV7 1749 aa20.03■□□□□ 0.8
MECP2-217ENST00000628176 ZNF326Q5BKZ1 582 aaKnown RBP20.03■□□□□ 0.8
MECP2-217ENST00000628176 NLRP1Q9C000 1473 aa20.03■□□□□ 0.8
MECP2-217ENST00000628176 CEP170BQ9Y4F5 1589 aaPredicted RBP20.03■□□□□ 0.8
MECP2-217ENST00000628176 SPATA31E1Q6ZUB1 1445 aa20.03■□□□□ 0.8
MECP2-217ENST00000628176 A2ML1A8K2U0 1454 aa20.02■□□□□ 0.79
MECP2-217ENST00000628176 UHRF1BP1Q6BDS2 1440 aa20.01■□□□□ 0.79
MECP2-217ENST00000628176 ADGRB3O60242 1522 aa20.01■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms