RNA–Protein interactions for RNA: ENST00000627784.2

TCF4-261, Transcript of transcription factor 4, humanhuman

TSL 4

Gene TCF4, Length 601 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-261ENST00000627784 PIP4K2BP78356 416 aa27.3■■□□□ 1.96
TCF4-261ENST00000627784 SCAF1Q9H7N4 1312 aaKnown RBP27.29■■□□□ 1.96
TCF4-261ENST00000627784 NEURL4Q96JN8 1562 aa27.28■■□□□ 1.96
TCF4-261ENST00000627784 TNRQ92752 1358 aa27.28■■□□□ 1.96
TCF4-261ENST00000627784 EHBP1L1Q8N3D4 1523 aa27.24■■□□□ 1.95
TCF4-261ENST00000627784 SHANK2Q9UPX8 1470 aa27.24■■□□□ 1.95
TCF4-261ENST00000627784 CEP162Q5TB80 1403 aa27.24■■□□□ 1.95
TCF4-261ENST00000627784 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP27.23■■□□□ 1.95
TCF4-261ENST00000627784 PZPP20742 1482 aa27.23■■□□□ 1.95
TCF4-261ENST00000627784 WASHC2CQ9Y4E1 1318 aa27.22■■□□□ 1.95
TCF4-261ENST00000627784 TOM1O60784 492 aa27.21■■□□□ 1.95
TCF4-261ENST00000627784 POLR1AO95602 1720 aaPredicted RBP27.2■■□□□ 1.94
TCF4-261ENST00000627784 ANKLE2Q86XL3 938 aa27.2■■□□□ 1.94
TCF4-261ENST00000627784 CPS1P31327 1500 aa27.2■■□□□ 1.94
TCF4-261ENST00000627784 KDM5DQ9BY66 1539 aa27.2■■□□□ 1.94
TCF4-261ENST00000627784 CCDC141Q6ZP82 1450 aa27.19■■□□□ 1.94
TCF4-261ENST00000627784 MIA2Q96PC5 1412 aa27.18■■□□□ 1.94
TCF4-261ENST00000627784 MED1Q15648 1581 aaPredicted RBP27.17■■□□□ 1.94
TCF4-261ENST00000627784 THEMISQ8N1K5 641 aaPredicted RBP27.16■■□□□ 1.94
TCF4-261ENST00000627784 CAMSAP2Q08AD1 1489 aa27.16■■□□□ 1.94
TCF4-261ENST00000627784 VWDEQ8N2E2 1590 aa27.16■■□□□ 1.94
TCF4-261ENST00000627784 NCOA2Q15596 1464 aa27.15■■□□□ 1.94
TCF4-261ENST00000627784 ALKQ9UM73 1620 aa27.13■■□□□ 1.93
TCF4-261ENST00000627784 RSPH4AQ5TD94 716 aa27.12■■□□□ 1.93
TCF4-261ENST00000627784 NPHP4O75161 1426 aaPredicted RBP27.12■■□□□ 1.93
TCF4-261ENST00000627784 UGGT1Q9NYU2 1555 aa27.11■■□□□ 1.93
TCF4-261ENST00000627784 MED14O60244 1454 aa27.1■■□□□ 1.93
TCF4-261ENST00000627784 NLRP1Q9C000 1473 aa27.1■■□□□ 1.93
TCF4-261ENST00000627784 FAM135AQ9P2D6 1515 aa27.1■■□□□ 1.93
TCF4-261ENST00000627784 TSPY4P0CV99 314 aa27.06■■□□□ 1.92
TCF4-261ENST00000627784 TSPY10P0CW01 314 aa27.06■■□□□ 1.92
TCF4-261ENST00000627784 SENP3Q9H4L4 574 aaPredicted RBP27.06■■□□□ 1.92
TCF4-261ENST00000627784 DEPDC5O75140 1603 aa27.05■■□□□ 1.92
TCF4-261ENST00000627784 ARHGEF5Q12774 1597 aa27.03■■□□□ 1.92
TCF4-261ENST00000627784 STRCP1A6NGW2 1772 aa27.02■■□□□ 1.92
TCF4-261ENST00000627784 IQGAP1P46940 1657 aa27.01■■□□□ 1.91
TCF4-261ENST00000627784 ABCC3O15438 1527 aa27■■□□□ 1.91
TCF4-261ENST00000627784 LRRC7Q96NW7 1537 aa27■■□□□ 1.91
TCF4-261ENST00000627784 PHF23Q9BUL5 403 aaPredicted RBP26.98■■□□□ 1.91
TCF4-261ENST00000627784 RNF17Q9BXT8 1623 aaKnown RBP26.97■■□□□ 1.91
TCF4-261ENST00000627784 ERVK-7P63135 1459 aa26.96■■□□□ 1.91
TCF4-261ENST00000627784 MROH1Q8NDA8 1641 aa26.92■■□□□ 1.9
TCF4-261ENST00000627784 LTKP29376 864 aa26.92■■□□□ 1.9
TCF4-261ENST00000627784 MAST1Q9Y2H9 1570 aa26.9■■□□□ 1.9
TCF4-261ENST00000627784 LRRC9Q6ZRR7 1453 aa26.9■■□□□ 1.9
TCF4-261ENST00000627784 KANK4Q5T7N3 995 aaPredicted RBP26.9■■□□□ 1.9
TCF4-261ENST00000627784 CFAP65Q6ZU64 1925 aaKnown RBP26.89■■□□□ 1.9
TCF4-261ENST00000627784 ZC3H13Q5T200 1668 aaKnown RBP26.89■■□□□ 1.89
TCF4-261ENST00000627784 UBR1Q8IWV7 1749 aa26.87■■□□□ 1.89
TCF4-261ENST00000627784 CEP152O94986 1710 aa26.86■■□□□ 1.89
TCF4-261ENST00000627784 TXNDC2Q86VQ3 553 aa26.86■■□□□ 1.89
TCF4-261ENST00000627784 RGS17Q9UGC6 210 aaPredicted RBP26.86■■□□□ 1.89
TCF4-261ENST00000627784 SCAF11Q99590 1463 aaKnown RBP26.86■■□□□ 1.89
TCF4-261ENST00000627784 EIF2AK4Q9P2K8 1649 aaKnown RBP26.85■■□□□ 1.89
TCF4-261ENST00000627784 SYNMO15061 1565 aa26.84■■□□□ 1.89
TCF4-261ENST00000627784 ARHGAP23Q9P227 1491 aa26.81■■□□□ 1.88
TCF4-261ENST00000627784 VPS8Q8N3P4 1428 aa26.79■■□□□ 1.88
TCF4-261ENST00000627784 SLIT1O75093 1534 aa26.79■■□□□ 1.88
TCF4-261ENST00000627784 DUOX2Q9NRD8 1548 aa26.78■■□□□ 1.88
TCF4-261ENST00000627784 MYOM3Q5VTT5 1437 aa26.77■■□□□ 1.88
TCF4-261ENST00000627784 LOC105371045A0A1W2PR82 267 aa26.77■■□□□ 1.88
TCF4-261ENST00000627784 XIRP1Q702N8 1843 aaKnown RBP26.76■■□□□ 1.88
TCF4-261ENST00000627784 RRP7BPQ9NSQ0 103 aa26.76■■□□□ 1.87
TCF4-261ENST00000627784 ARHGAP31Q2M1Z3 1444 aa26.75■■□□□ 1.87
TCF4-261ENST00000627784 GRWD1Q9BQ67 446 aaKnown RBP eCLIP26.75■■□□□ 1.87
TCF4-261ENST00000627784 KIF15Q9NS87 1388 aa26.74■■□□□ 1.87
TCF4-261ENST00000627784 EID1Q9Y6B2 187 aa26.73■■□□□ 1.87
TCF4-261ENST00000627784 ABCC5O15440 1437 aa26.72■■□□□ 1.87
TCF4-261ENST00000627784 TMEM2Q9UHN6 1383 aa26.71■■□□□ 1.87
TCF4-261ENST00000627784 PRDM15P57071 1507 aaPredicted RBP26.71■■□□□ 1.87
TCF4-261ENST00000627784 PIK3C2BO00750 1634 aa26.7■■□□□ 1.86
TCF4-261ENST00000627784 RBM33Q96EV2 1170 aaKnown RBP26.7■■□□□ 1.86
TCF4-261ENST00000627784 IDI1Q13907 227 aa26.68■■□□□ 1.86
TCF4-261ENST00000627784 TMEM94Q12767 1356 aa26.68■■□□□ 1.86
TCF4-261ENST00000627784 FAM135BQ49AJ0 1406 aa26.67■■□□□ 1.86
TCF4-261ENST00000627784 ERBINQ96RT1 1412 aa26.67■■□□□ 1.86
TCF4-261ENST00000627784 MAP3K1Q13233 1512 aa26.67■■□□□ 1.86
TCF4-261ENST00000627784 STAG3Q9UJ98 1225 aa26.66■■□□□ 1.86
TCF4-261ENST00000627784 POTEAQ6S8J7 498 aa26.65■■□□□ 1.86
TCF4-261ENST00000627784 SLC26A8Q96RN1 970 aa26.65■■□□□ 1.86
TCF4-261ENST00000627784 KCNA6P17658 529 aa26.63■■□□□ 1.85
TCF4-261ENST00000627784 PROSER2Q86WR7 435 aaPredicted RBP26.6■■□□□ 1.85
TCF4-261ENST00000627784 CHIC2Q9UKJ5 165 aa26.6■■□□□ 1.85
TCF4-261ENST00000627784 CROCC2H7BZ55 1655 aa26.6■■□□□ 1.85
TCF4-261ENST00000627784 TET3O43151 1660 aa26.6■■□□□ 1.85
TCF4-261ENST00000627784 EFCAB6Q5THR3 1501 aa26.6■■□□□ 1.85
TCF4-261ENST00000627784 DAPK1P53355 1430 aa26.59■■□□□ 1.85
TCF4-261ENST00000627784 PTPN23Q9H3S7 1636 aa26.58■■□□□ 1.85
TCF4-261ENST00000627784 KANK1Q14678 1352 aa26.58■■□□□ 1.84
TCF4-261ENST00000627784 ROBO1Q9Y6N7 1651 aa26.56■■□□□ 1.84
TCF4-261ENST00000627784 LMTK2Q8IWU2 1503 aa26.55■■□□□ 1.84
TCF4-261ENST00000627784 NOS1P29475 1434 aa26.53■■□□□ 1.84
TCF4-261ENST00000627784 KDM5AP29375 1690 aaKnown RBP26.52■■□□□ 1.84
TCF4-261ENST00000627784 FGD6Q6ZV73 1430 aa26.49■■□□□ 1.83
TCF4-261ENST00000627784 ANKRD30AQ9BXX3 1397 aa26.49■■□□□ 1.83
TCF4-261ENST00000627784 BCANQ96GW7 911 aa26.48■■□□□ 1.83
TCF4-261ENST00000627784 SLAIN2Q9P270 581 aa26.47■■□□□ 1.83
TCF4-261ENST00000627784 ADGRB3O60242 1522 aa26.47■■□□□ 1.83
TCF4-261ENST00000627784 NWD1Q149M9 1564 aa26.46■■□□□ 1.83
TCF4-261ENST00000627784 NKTRP30414 1462 aaKnown RBP26.45■■□□□ 1.82
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms