RNA–Protein interactions for RNA: ENST00000626274.2

PNKP-219, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 2

Gene PNKP, Length 752 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-219ENST00000626274 NCOA1Q15788 1441 aa30.61■■■□□ 2.49
PNKP-219ENST00000626274 ADGRL2O95490 1459 aa30.61■■■□□ 2.49
PNKP-219ENST00000626274 SETD1BQ9UPS6 1966 aaKnown RBP30.59■■■□□ 2.49
PNKP-219ENST00000626274 RNF17Q9BXT8 1623 aaKnown RBP30.58■■■□□ 2.49
PNKP-219ENST00000626274 ERBINQ96RT1 1412 aa30.58■■■□□ 2.49
PNKP-219ENST00000626274 RRBP1Q9P2E9 1410 aaKnown RBP30.58■■■□□ 2.49
PNKP-219ENST00000626274 FAM135AQ9P2D6 1515 aa30.57■■■□□ 2.48
PNKP-219ENST00000626274 ZMYM3Q14202 1370 aa30.56■■■□□ 2.48
PNKP-219ENST00000626274 PTPRKQ15262 1439 aa30.56■■■□□ 2.48
PNKP-219ENST00000626274 KDM5DQ9BY66 1539 aa30.53■■■□□ 2.48
PNKP-219ENST00000626274 ITGAEP38570 1179 aa30.51■■■□□ 2.47
PNKP-219ENST00000626274 WASHC2CQ9Y4E1 1318 aa30.5■■■□□ 2.47
PNKP-219ENST00000626274 PREX1Q8TCU6 1659 aa30.49■■■□□ 2.47
PNKP-219ENST00000626274 MROH1Q8NDA8 1641 aa30.49■■■□□ 2.47
PNKP-219ENST00000626274 LMTK3Q96Q04 1460 aa30.49■■■□□ 2.47
PNKP-219ENST00000626274 ROCK1Q13464 1354 aa30.48■■■□□ 2.47
PNKP-219ENST00000626274 ZC3H13Q5T200 1668 aaKnown RBP30.46■■■□□ 2.47
PNKP-219ENST00000626274 NPATQ14207 1427 aa30.46■■■□□ 2.47
PNKP-219ENST00000626274 DEPDC5O75140 1603 aa30.44■■■□□ 2.46
PNKP-219ENST00000626274 PRDM15P57071 1507 aaPredicted RBP30.43■■■□□ 2.46
PNKP-219ENST00000626274 ANKRD50Q9ULJ7 1429 aa30.43■■■□□ 2.46
PNKP-219ENST00000626274 ABCC3O15438 1527 aa30.42■■■□□ 2.46
PNKP-219ENST00000626274 CEP152O94986 1710 aa30.41■■■□□ 2.46
PNKP-219ENST00000626274 UHRF1BP1Q6BDS2 1440 aa30.4■■■□□ 2.46
PNKP-219ENST00000626274 PZPP20742 1482 aa30.38■■■□□ 2.45
PNKP-219ENST00000626274 GRWD1Q9BQ67 446 aaKnown RBP eCLIP30.38■■■□□ 2.45
PNKP-219ENST00000626274 KANK1Q14678 1352 aa30.37■■■□□ 2.45
PNKP-219ENST00000626274 CAMSAP1Q5T5Y3 1602 aa30.35■■■□□ 2.45
PNKP-219ENST00000626274 HSPA2P54652 639 aa30.34■■■□□ 2.45
PNKP-219ENST00000626274 FBXO31Q5XUX0 539 aaPredicted RBP30.31■■■□□ 2.44
PNKP-219ENST00000626274 VWDEQ8N2E2 1590 aa30.31■■■□□ 2.44
PNKP-219ENST00000626274 CFAP65Q6ZU64 1925 aaKnown RBP30.3■■■□□ 2.44
PNKP-219ENST00000626274 MYO3AQ8NEV4 1616 aa30.29■■■□□ 2.44
PNKP-219ENST00000626274 TNRQ92752 1358 aa30.27■■■□□ 2.44
PNKP-219ENST00000626274 LMTK2Q8IWU2 1503 aa30.27■■■□□ 2.44
PNKP-219ENST00000626274 UNC13BO14795 1591 aa30.26■■■□□ 2.43
PNKP-219ENST00000626274 ARHGAP31Q2M1Z3 1444 aa30.25■■■□□ 2.43
PNKP-219ENST00000626274 ZNF142P52746 1687 aaPredicted RBP30.24■■■□□ 2.43
PNKP-219ENST00000626274 SPATA31D1Q6ZQQ2 1576 aa30.22■■■□□ 2.43
PNKP-219ENST00000626274 CEP170BQ9Y4F5 1589 aaPredicted RBP30.22■■■□□ 2.43
PNKP-219ENST00000626274 GCC2Q8IWJ2 1684 aa30.22■■■□□ 2.43
PNKP-219ENST00000626274 ERVK-7P63135 1459 aa30.21■■■□□ 2.43
PNKP-219ENST00000626274 NAIPQ13075 1403 aa30.2■■■□□ 2.42
PNKP-219ENST00000626274 A2ML1A8K2U0 1454 aa30.18■■■□□ 2.42
PNKP-219ENST00000626274 EFCAB6Q5THR3 1501 aa30.17■■■□□ 2.42
PNKP-219ENST00000626274 HFM1A2PYH4 1435 aa30.16■■■□□ 2.42
PNKP-219ENST00000626274 NLRP1Q9C000 1473 aa30.16■■■□□ 2.42
PNKP-219ENST00000626274 TET3O43151 1660 aa30.16■■■□□ 2.42
PNKP-219ENST00000626274 IQGAP3Q86VI3 1631 aa30.14■■■□□ 2.42
PNKP-219ENST00000626274 STRCQ7RTU9 1775 aa30.13■■■□□ 2.41
PNKP-219ENST00000626274 NUP155O75694 1391 aa30.13■■■□□ 2.41
PNKP-219ENST00000626274 RPRD2Q5VT52 1461 aaKnown RBP30.09■■■□□ 2.41
PNKP-219ENST00000626274 UGGT1Q9NYU2 1555 aa30.06■■■□□ 2.4
PNKP-219ENST00000626274 PLA2R1Q13018 1463 aa30.06■■■□□ 2.4
PNKP-219ENST00000626274 DMRT2Q9Y5R5 561 aa30.04■■■□□ 2.4
PNKP-219ENST00000626274 E9PCH4 1651 aa30.04■■■□□ 2.4
PNKP-219ENST00000626274 NOS1P29475 1434 aa30.04■■■□□ 2.4
PNKP-219ENST00000626274 THEMISQ8N1K5 641 aaPredicted RBP30.03■■■□□ 2.4
PNKP-219ENST00000626274 SYNMO15061 1565 aa30.01■■■□□ 2.39
PNKP-219ENST00000626274 UBR1Q8IWV7 1749 aa29.99■■■□□ 2.39
PNKP-219ENST00000626274 PKD2Q13563 968 aa29.98■■■□□ 2.39
PNKP-219ENST00000626274 TRIM52Q96A61 297 aa29.97■■■□□ 2.39
PNKP-219ENST00000626274 NCKAP5LQ9HCH0 1330 aa29.96■■■□□ 2.39
PNKP-219ENST00000626274 PTPRTO14522 1441 aa29.96■■■□□ 2.39
PNKP-219ENST00000626274 PIK3C2BO00750 1634 aa29.96■■■□□ 2.39
PNKP-219ENST00000626274 POLR1AO95602 1720 aaPredicted RBP29.94■■■□□ 2.38
PNKP-219ENST00000626274 IDI1Q13907 227 aa29.94■■■□□ 2.38
PNKP-219ENST00000626274 SLC52A1Q9NWF4 448 aa29.94■■■□□ 2.38
PNKP-219ENST00000626274 KDM5AP29375 1690 aaKnown RBP29.91■■■□□ 2.38
PNKP-219ENST00000626274 STAG3Q9UJ98 1225 aa29.91■■■□□ 2.38
PNKP-219ENST00000626274 ANKLE2Q86XL3 938 aa29.9■■■□□ 2.38
PNKP-219ENST00000626274 SETD5Q9C0A6 1442 aa29.89■■■□□ 2.38
PNKP-219ENST00000626274 SPHKAPQ2M3C7 1700 aa29.87■■■□□ 2.37
PNKP-219ENST00000626274 ACIN1Q9UKV3 1341 aaKnown RBP29.86■■■□□ 2.37
PNKP-219ENST00000626274 ADGRB3O60242 1522 aa29.85■■■□□ 2.37
PNKP-219ENST00000626274 NEURL4Q96JN8 1562 aa29.85■■■□□ 2.37
PNKP-219ENST00000626274 SLC4A1APQ9BWU0 796 aaKnown RBP29.84■■■□□ 2.37
PNKP-219ENST00000626274 SLIT1O75093 1534 aa29.84■■■□□ 2.37
PNKP-219ENST00000626274 ARHGAP23Q9P227 1491 aa29.82■■■□□ 2.36
PNKP-219ENST00000626274 MYO5BQ9ULV0 1848 aa29.8■■■□□ 2.36
PNKP-219ENST00000626274 MED14O60244 1454 aa29.8■■■□□ 2.36
PNKP-219ENST00000626274 TMEM2Q9UHN6 1383 aa29.79■■■□□ 2.36
PNKP-219ENST00000626274 RAB3GAP2Q9H2M9 1393 aa29.78■■■□□ 2.36
PNKP-219ENST00000626274 SCAF11Q99590 1463 aaKnown RBP29.78■■■□□ 2.36
PNKP-219ENST00000626274 NPHP4O75161 1426 aaPredicted RBP29.78■■■□□ 2.36
PNKP-219ENST00000626274 TMEM131LA2VDJ0 1609 aa29.78■■■□□ 2.36
PNKP-219ENST00000626274 TXNDC2Q86VQ3 553 aa29.77■■■□□ 2.36
PNKP-219ENST00000626274 EID1Q9Y6B2 187 aa29.77■■■□□ 2.36
PNKP-219ENST00000626274 IQGAP1P46940 1657 aa29.76■■■□□ 2.35
PNKP-219ENST00000626274 CHGAP10645 457 aaKnown RBP29.74■■■□□ 2.35
PNKP-219ENST00000626274 LTKP29376 864 aa29.74■■■□□ 2.35
PNKP-219ENST00000626274 MPHOSPH9Q99550 1183 aa29.74■■■□□ 2.35
PNKP-219ENST00000626274 TRPM2O94759 1503 aa29.74■■■□□ 2.35
PNKP-219ENST00000626274 CLTCL1P53675 1640 aa29.69■■■□□ 2.34
PNKP-219ENST00000626274 HRCP23327 699 aa29.67■■■□□ 2.34
PNKP-219ENST00000626274 KIF1BO60333 1816 aa29.66■■■□□ 2.34
PNKP-219ENST00000626274 HDGFP51858 240 aaKnown RBP29.66■■■□□ 2.34
PNKP-219ENST00000626274 LTBP4Q8N2S1 1624 aa29.66■■■□□ 2.34
PNKP-219ENST00000626274 ZNF335Q9H4Z2 1342 aaPredicted RBP29.66■■■□□ 2.34
PNKP-219ENST00000626274 ZFYVE9O95405 1425 aa29.65■■■□□ 2.34
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms