RNA–Protein interactions for RNA: ENST00000626236.2

SGMS1-211, Transcript of sphingomyelin synthase 1, humanhuman

TSL 1 (best)

Gene SGMS1, Length 1,013 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGMS1-211ENST00000626236 RRP7BPQ9NSQ0 103 aa12.83□□□□□ -0.36
SGMS1-211ENST00000626236 KIF15Q9NS87 1388 aa12.82□□□□□ -0.36
SGMS1-211ENST00000626236 DUOX2Q9NRD8 1548 aa12.82□□□□□ -0.36
SGMS1-211ENST00000626236 ATP10AO60312 1499 aa12.81□□□□□ -0.36
SGMS1-211ENST00000626236 A2MP01023 1474 aa12.8□□□□□ -0.36
SGMS1-211ENST00000626236 SIGLEC1Q9BZZ2 1709 aa12.8□□□□□ -0.36
SGMS1-211ENST00000626236 PCGF6Q9BYE7 350 aa12.8□□□□□ -0.36
SGMS1-211ENST00000626236 HFM1A2PYH4 1435 aa12.79□□□□□ -0.36
SGMS1-211ENST00000626236 REREQ9P2R6 1566 aa12.79□□□□□ -0.36
SGMS1-211ENST00000626236 EIF2AK4Q9P2K8 1649 aaKnown RBP12.79□□□□□ -0.36
SGMS1-211ENST00000626236 NAIPQ13075 1403 aa12.79□□□□□ -0.36
SGMS1-211ENST00000626236 DHX29Q7Z478 1369 aaKnown RBP12.77□□□□□ -0.37
SGMS1-211ENST00000626236 ERBINQ96RT1 1412 aa12.77□□□□□ -0.37
SGMS1-211ENST00000626236 ANKRD50Q9ULJ7 1429 aa12.77□□□□□ -0.37
SGMS1-211ENST00000626236 BCORL1Q5H9F3 1711 aa12.76□□□□□ -0.37
SGMS1-211ENST00000626236 SETD5Q9C0A6 1442 aa12.75□□□□□ -0.37
SGMS1-211ENST00000626236 DEPDC5O75140 1603 aa12.73□□□□□ -0.37
SGMS1-211ENST00000626236 RNF17Q9BXT8 1623 aaKnown RBP12.73□□□□□ -0.37
SGMS1-211ENST00000626236 AGLP35573 1532 aa12.73□□□□□ -0.37
SGMS1-211ENST00000626236 UNC13BO14795 1591 aa12.73□□□□□ -0.37
SGMS1-211ENST00000626236 RAB3GAP2Q9H2M9 1393 aa12.72□□□□□ -0.37
SGMS1-211ENST00000626236 ARID4BQ4LE39 1312 aaPredicted RBP12.72□□□□□ -0.37
SGMS1-211ENST00000626236 KIF3BO15066 747 aa12.72□□□□□ -0.37
SGMS1-211ENST00000626236 MROH1Q8NDA8 1641 aa12.7□□□□□ -0.38
SGMS1-211ENST00000626236 PRDM15P57071 1507 aaPredicted RBP12.69□□□□□ -0.38
SGMS1-211ENST00000626236 CEP152O94986 1710 aa12.69□□□□□ -0.38
SGMS1-211ENST00000626236 MLECQ14165 292 aa12.68□□□□□ -0.38
SGMS1-211ENST00000626236 GGT6Q6P531 493 aa12.68□□□□□ -0.38
SGMS1-211ENST00000626236 FER1L4A9Z1Z3 1794 aa12.68□□□□□ -0.38
SGMS1-211ENST00000626236 IQGAP3Q86VI3 1631 aa12.67□□□□□ -0.38
SGMS1-211ENST00000626236 SLC4A2P04920 1241 aa12.67□□□□□ -0.38
SGMS1-211ENST00000626236 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.67□□□□□ -0.38
SGMS1-211ENST00000626236 CLTCQ00610 1675 aaKnown RBP12.67□□□□□ -0.38
SGMS1-211ENST00000626236 ZC3H13Q5T200 1668 aaKnown RBP12.67□□□□□ -0.38
SGMS1-211ENST00000626236 TRIM52Q96A61 297 aa12.66□□□□□ -0.38
SGMS1-211ENST00000626236 VWDEQ8N2E2 1590 aa12.65□□□□□ -0.38
SGMS1-211ENST00000626236 KDM5DQ9BY66 1539 aa12.65□□□□□ -0.38
SGMS1-211ENST00000626236 NUP155O75694 1391 aa12.65□□□□□ -0.38
SGMS1-211ENST00000626236 KANK1Q14678 1352 aa12.65□□□□□ -0.38
SGMS1-211ENST00000626236 FAM135AQ9P2D6 1515 aa12.64□□□□□ -0.39
SGMS1-211ENST00000626236 ADAMTSL3P82987 1691 aa12.64□□□□□ -0.39
SGMS1-211ENST00000626236 ABCC3O15438 1527 aa12.63□□□□□ -0.39
SGMS1-211ENST00000626236 CAMSAP1Q5T5Y3 1602 aa12.63□□□□□ -0.39
SGMS1-211ENST00000626236 MADDQ8WXG6 1647 aa12.63□□□□□ -0.39
SGMS1-211ENST00000626236 HRCP23327 699 aa12.63□□□□□ -0.39
SGMS1-211ENST00000626236 TET3O43151 1660 aa12.63□□□□□ -0.39
SGMS1-211ENST00000626236 RIMS1Q86UR5 1692 aaKnown RBP12.63□□□□□ -0.39
SGMS1-211ENST00000626236 ACIN1Q9UKV3 1341 aaKnown RBP12.62□□□□□ -0.39
SGMS1-211ENST00000626236 WASHC2CQ9Y4E1 1318 aa12.62□□□□□ -0.39
SGMS1-211ENST00000626236 MROH2AA6NES4 1674 aa12.61□□□□□ -0.39
SGMS1-211ENST00000626236 PZPP20742 1482 aa12.61□□□□□ -0.39
SGMS1-211ENST00000626236 ESF1Q9H501 851 aaKnown RBP12.61□□□□□ -0.39
SGMS1-211ENST00000626236 LMTK2Q8IWU2 1503 aa12.61□□□□□ -0.39
SGMS1-211ENST00000626236 E9PCH4 1651 aa12.61□□□□□ -0.39
SGMS1-211ENST00000626236 EFCAB6Q5THR3 1501 aa12.6□□□□□ -0.39
SGMS1-211ENST00000626236 CFAP65Q6ZU64 1925 aaKnown RBP12.58□□□□□ -0.39
SGMS1-211ENST00000626236 C3P01024 1663 aa12.58□□□□□ -0.4
SGMS1-211ENST00000626236 CNTLNQ9NXG0 1405 aa12.58□□□□□ -0.4
SGMS1-211ENST00000626236 MPHOSPH9Q99550 1183 aa12.57□□□□□ -0.4
SGMS1-211ENST00000626236 ZBTB22O15209 634 aa12.56□□□□□ -0.4
SGMS1-211ENST00000626236 PREX1Q8TCU6 1659 aa12.55□□□□□ -0.4
SGMS1-211ENST00000626236 SPHKAPQ2M3C7 1700 aa12.55□□□□□ -0.4
SGMS1-211ENST00000626236 NPATQ14207 1427 aa12.54□□□□□ -0.4
SGMS1-211ENST00000626236 PKD2Q13563 968 aa12.54□□□□□ -0.4
SGMS1-211ENST00000626236 ZMYM3Q14202 1370 aa12.54□□□□□ -0.4
SGMS1-211ENST00000626236 DHX57Q6P158 1386 aaKnown RBP12.54□□□□□ -0.4
SGMS1-211ENST00000626236 ARHGAP31Q2M1Z3 1444 aa12.53□□□□□ -0.4
SGMS1-211ENST00000626236 RPRD2Q5VT52 1461 aaKnown RBP12.53□□□□□ -0.4
SGMS1-211ENST00000626236 PTPRMP28827 1452 aa12.51□□□□□ -0.41
SGMS1-211ENST00000626236 KDM4FA0A1W2PPD8 638 aa12.5□□□□□ -0.41
SGMS1-211ENST00000626236 CEBPAP49715 358 aaPredicted RBP12.5□□□□□ -0.41
SGMS1-211ENST00000626236 ERVK-7P63135 1459 aa12.5□□□□□ -0.41
SGMS1-211ENST00000626236 SPATA31D1Q6ZQQ2 1576 aa12.5□□□□□ -0.41
SGMS1-211ENST00000626236 SYNMO15061 1565 aa12.49□□□□□ -0.41
SGMS1-211ENST00000626236 TRPM2O94759 1503 aa12.49□□□□□ -0.41
SGMS1-211ENST00000626236 FBXO31Q5XUX0 539 aaPredicted RBP12.48□□□□□ -0.41
SGMS1-211ENST00000626236 CCER1Q8TC90 406 aaPredicted RBP12.48□□□□□ -0.41
SGMS1-211ENST00000626236 FOXD4L1Q9NU39 408 aa12.48□□□□□ -0.41
SGMS1-211ENST00000626236 PTPRTO14522 1441 aa12.47□□□□□ -0.41
SGMS1-211ENST00000626236 CLTCL1P53675 1640 aa12.47□□□□□ -0.41
SGMS1-211ENST00000626236 MYO3AQ8NEV4 1616 aa12.47□□□□□ -0.41
SGMS1-211ENST00000626236 UGGT1Q9NYU2 1555 aa12.47□□□□□ -0.41
SGMS1-211ENST00000626236 PLA2R1Q13018 1463 aa12.46□□□□□ -0.41
SGMS1-211ENST00000626236 NOS1P29475 1434 aa12.46□□□□□ -0.41
SGMS1-211ENST00000626236 RNF39Q9H2S5 420 aa12.46□□□□□ -0.41
SGMS1-211ENST00000626236 PIK3C2BO00750 1634 aa12.46□□□□□ -0.41
SGMS1-211ENST00000626236 KIF1BO60333 1816 aa12.46□□□□□ -0.42
SGMS1-211ENST00000626236 ANKRD30BQ9BXX2 1392 aa12.45□□□□□ -0.42
SGMS1-211ENST00000626236 U3KPZ7 1027 aaPredicted RBP12.45□□□□□ -0.42
SGMS1-211ENST00000626236 TNRQ92752 1358 aa12.44□□□□□ -0.42
SGMS1-211ENST00000626236 CCDC144AA2RUR9 1427 aa12.44□□□□□ -0.42
SGMS1-211ENST00000626236 MYO5BQ9ULV0 1848 aa12.43□□□□□ -0.42
SGMS1-211ENST00000626236 ZNF142P52746 1687 aaPredicted RBP12.42□□□□□ -0.42
SGMS1-211ENST00000626236 SETD1BQ9UPS6 1966 aaKnown RBP12.41□□□□□ -0.42
SGMS1-211ENST00000626236 NLRP1Q9C000 1473 aa12.4□□□□□ -0.42
SGMS1-211ENST00000626236 UBR1Q8IWV7 1749 aa12.4□□□□□ -0.42
SGMS1-211ENST00000626236 SIN3AQ96ST3 1273 aa12.4□□□□□ -0.42
SGMS1-211ENST00000626236 SLC52A1Q9NWF4 448 aa12.4□□□□□ -0.42
SGMS1-211ENST00000626236 KDM5AP29375 1690 aaKnown RBP12.4□□□□□ -0.42
SGMS1-211ENST00000626236 ADGRB3O60242 1522 aa12.4□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 247.5 ms