RNA–Protein interactions for RNA: ENST00000626064.1

POLR1D-208, Transcript of RNA polymerase I and III subunit D, human

TSL 2

Gene POLR1D, Length 988 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
POLR1D-208	ENST00000626064	DEPDC5	O75140	1603 aa		34.15	■■■■□ 3.06
POLR1D-208	ENST00000626064	KDM4F	A0A1W2PPD8	638 aa		34.13	■■■■□ 3.05
POLR1D-208	ENST00000626064	MROH1	Q8NDA8	1641 aa		34.12	■■■■□ 3.05
POLR1D-208	ENST00000626064	FAM135A	Q9P2D6	1515 aa		34.1	■■■■□ 3.05
POLR1D-208	ENST00000626064	SETD5	Q9C0A6	1442 aa		34.1	■■■■□ 3.05
POLR1D-208	ENST00000626064	PRDM15	P57071	1507 aa	Predicted RBP	34.08	■■■■□ 3.05
POLR1D-208	ENST00000626064	FER1L4	A9Z1Z3	1794 aa		34.08	■■■■□ 3.05
POLR1D-208	ENST00000626064	KDM5D	Q9BY66	1539 aa		34.06	■■■■□ 3.04
POLR1D-208	ENST00000626064	MADD	Q8WXG6	1647 aa		34.06	■■■■□ 3.04
POLR1D-208	ENST00000626064	UNC13B	O14795	1591 aa		34.06	■■■■□ 3.04
POLR1D-208	ENST00000626064	CNTLN	Q9NXG0	1405 aa		34.04	■■■■□ 3.04
POLR1D-208	ENST00000626064	VWDE	Q8N2E2	1590 aa		34.04	■■■■□ 3.04
POLR1D-208	ENST00000626064	ACIN1	Q9UKV3	1341 aa	Known RBP	34.04	■■■■□ 3.04
POLR1D-208	ENST00000626064	HRC	P23327	699 aa		34.03	■■■■□ 3.04
POLR1D-208	ENST00000626064	WASHC2C	Q9Y4E1	1318 aa		34.01	■■■■□ 3.03
POLR1D-208	ENST00000626064	GRWD1	Q9BQ67	446 aa	Known RBP eCLIP	34	■■■■□ 3.03
POLR1D-208	ENST00000626064	ESF1	Q9H501	851 aa	Known RBP	34	■■■■□ 3.03
POLR1D-208	ENST00000626064	KANK1	Q14678	1352 aa		33.99	■■■■□ 3.03
POLR1D-208	ENST00000626064	MROH2A	A6NES4	1674 aa		33.99	■■■■□ 3.03
POLR1D-208	ENST00000626064	ZC3H13	Q5T200	1668 aa	Known RBP	33.99	■■■■□ 3.03
POLR1D-208	ENST00000626064	CLTC	Q00610	1675 aa	Known RBP	33.98	■■■■□ 3.03
POLR1D-208	ENST00000626064	RIMS1	Q86UR5	1692 aa	Known RBP	33.98	■■■■□ 3.03
POLR1D-208	ENST00000626064	ABCC3	O15438	1527 aa		33.97	■■■■□ 3.03
POLR1D-208	ENST00000626064	LMTK2	Q8IWU2	1503 aa		33.96	■■■■□ 3.03
POLR1D-208	ENST00000626064	RAB3GAP2	Q9H2M9	1393 aa		33.96	■■■■□ 3.03
POLR1D-208	ENST00000626064	CEP152	O94986	1710 aa		33.94	■■■■□ 3.02
POLR1D-208	ENST00000626064	NUP155	O75694	1391 aa		33.94	■■■■□ 3.02
POLR1D-208	ENST00000626064	ZMYM3	Q14202	1370 aa		33.93	■■■■□ 3.02
POLR1D-208	ENST00000626064	IQGAP3	Q86VI3	1631 aa		33.93	■■■■□ 3.02
POLR1D-208	ENST00000626064	PTPRM	P28827	1452 aa		33.91	■■■■□ 3.02
POLR1D-208	ENST00000626064	C3	P01024	1663 aa		33.87	■■■■□ 3.01
POLR1D-208	ENST00000626064	ARHGAP31	Q2M1Z3	1444 aa		33.87	■■■■□ 3.01
POLR1D-208	ENST00000626064	CAMSAP1	Q5T5Y3	1602 aa		33.86	■■■■□ 3.01
POLR1D-208	ENST00000626064	TET3	O43151	1660 aa		33.85	■■■■□ 3.01
POLR1D-208	ENST00000626064	TRIM52	Q96A61	297 aa		33.85	■■■■□ 3.01
POLR1D-208	ENST00000626064	SETD1B	Q9UPS6	1966 aa	Known RBP	33.84	■■■■□ 3.01
POLR1D-208	ENST00000626064	CEBPA	P49715	358 aa	Predicted RBP	33.81	■■■■□ 3
POLR1D-208	ENST00000626064	PCGF6	Q9BYE7	350 aa		33.81	■■■■□ 3
POLR1D-208	ENST00000626064	PZP	P20742	1482 aa		33.81	■■■■□ 3
POLR1D-208	ENST00000626064	CFAP65	Q6ZU64	1925 aa	Known RBP	33.8	■■■■□ 3
POLR1D-208	ENST00000626064	EFCAB6	Q5THR3	1501 aa		33.79	■■■■□ 3
POLR1D-208	ENST00000626064	NPAT	Q14207	1427 aa		33.77	■■■■□ 3
POLR1D-208	ENST00000626064	RPRD2	Q5VT52	1461 aa	Known RBP	33.76	■■■□□ 2.99
POLR1D-208	ENST00000626064		E9PCH4	1651 aa		33.74	■■■□□ 2.99
POLR1D-208	ENST00000626064	MPHOSPH9	Q99550	1183 aa		33.73	■■■□□ 2.99
POLR1D-208	ENST00000626064	SLC4A1AP	Q9BWU0	796 aa	Known RBP	33.73	■■■□□ 2.99
POLR1D-208	ENST00000626064	FBXO31	Q5XUX0	539 aa	Predicted RBP	33.71	■■■□□ 2.99
POLR1D-208	ENST00000626064	SPATA31D1	Q6ZQQ2	1576 aa		33.68	■■■□□ 2.98
POLR1D-208	ENST00000626064	PREX1	Q8TCU6	1659 aa		33.68	■■■□□ 2.98
POLR1D-208	ENST00000626064	ERVK-7	P63135	1459 aa		33.67	■■■□□ 2.98
POLR1D-208	ENST00000626064	NOS1	P29475	1434 aa		33.66	■■■□□ 2.98
POLR1D-208	ENST00000626064	PKD2	Q13563	968 aa		33.66	■■■□□ 2.98
POLR1D-208	ENST00000626064	PLPPR3	Q6T4P5	718 aa		33.65	■■■□□ 2.98
POLR1D-208	ENST00000626064	PTPRT	O14522	1441 aa		33.6	■■■□□ 2.97
POLR1D-208	ENST00000626064	TNR	Q92752	1358 aa		33.6	■■■□□ 2.97
POLR1D-208	ENST00000626064	SPHKAP	Q2M3C7	1700 aa		33.55	■■■□□ 2.96
POLR1D-208	ENST00000626064	SYNM	O15061	1565 aa		33.54	■■■□□ 2.96
POLR1D-208	ENST00000626064	SLC52A1	Q9NWF4	448 aa		33.53	■■■□□ 2.96
POLR1D-208	ENST00000626064	PLA2R1	Q13018	1463 aa		33.52	■■■□□ 2.96
POLR1D-208	ENST00000626064	AEBP2	Q6ZN18	517 aa	Predicted RBP	33.52	■■■□□ 2.96
POLR1D-208	ENST00000626064	NLRP1	Q9C000	1473 aa		33.51	■■■□□ 2.96
POLR1D-208	ENST00000626064	FOXD1	Q16676	465 aa		33.5	■■■□□ 2.95
POLR1D-208	ENST00000626064	MYO3A	Q8NEV4	1616 aa		33.48	■■■□□ 2.95
POLR1D-208	ENST00000626064	UHRF1BP1	Q6BDS2	1440 aa		33.47	■■■□□ 2.95
POLR1D-208	ENST00000626064	PIK3C2B	O00750	1634 aa		33.47	■■■□□ 2.95
POLR1D-208	ENST00000626064	IDI1	Q13907	227 aa		33.47	■■■□□ 2.95
POLR1D-208	ENST00000626064	TRPM2	O94759	1503 aa		33.46	■■■□□ 2.95
POLR1D-208	ENST00000626064	DHX57	Q6P158	1386 aa	Known RBP	33.45	■■■□□ 2.94
POLR1D-208	ENST00000626064	A2ML1	A8K2U0	1454 aa		33.44	■■■□□ 2.94
POLR1D-208	ENST00000626064	ZNF142	P52746	1687 aa	Predicted RBP	33.44	■■■□□ 2.94
POLR1D-208	ENST00000626064	ANKRD30B	Q9BXX2	1392 aa		33.43	■■■□□ 2.94
POLR1D-208	ENST00000626064	CEP170B	Q9Y4F5	1589 aa	Predicted RBP	33.41	■■■□□ 2.94
POLR1D-208	ENST00000626064	KDM5A	P29375	1690 aa	Known RBP	33.39	■■■□□ 2.94
POLR1D-208	ENST00000626064	LMTK3	Q96Q04	1460 aa		33.39	■■■□□ 2.94
POLR1D-208	ENST00000626064	UGGT1	Q9NYU2	1555 aa		33.37	■■■□□ 2.93
POLR1D-208	ENST00000626064	CLTCL1	P53675	1640 aa		33.35	■■■□□ 2.93
POLR1D-208	ENST00000626064	UBR1	Q8IWV7	1749 aa		33.35	■■■□□ 2.93
POLR1D-208	ENST00000626064	THEMIS	Q8N1K5	641 aa	Predicted RBP	33.32	■■■□□ 2.92
POLR1D-208	ENST00000626064	KIF1B	O60333	1816 aa		33.32	■■■□□ 2.92
POLR1D-208	ENST00000626064	TMEM131L	A2VDJ0	1609 aa		33.31	■■■□□ 2.92
POLR1D-208	ENST00000626064	CCDC144A	A2RUR9	1427 aa		33.31	■■■□□ 2.92
POLR1D-208	ENST00000626064	ADGRB3	O60242	1522 aa		33.28	■■■□□ 2.92
POLR1D-208	ENST00000626064	MYO5B	Q9ULV0	1848 aa		33.28	■■■□□ 2.92
POLR1D-208	ENST00000626064	STAG3	Q9UJ98	1225 aa		33.26	■■■□□ 2.91
POLR1D-208	ENST00000626064	NEURL4	Q96JN8	1562 aa		33.23	■■■□□ 2.91
POLR1D-208	ENST00000626064	ARHGAP23	Q9P227	1491 aa		33.21	■■■□□ 2.91
POLR1D-208	ENST00000626064	HSPA2	P54652	639 aa		33.21	■■■□□ 2.91
POLR1D-208	ENST00000626064	SLIT1	O75093	1534 aa		33.2	■■■□□ 2.91
POLR1D-208	ENST00000626064	SPATA31E1	Q6ZUB1	1445 aa		33.19	■■■□□ 2.9
POLR1D-208	ENST00000626064	CHGA	P10645	457 aa	Known RBP	33.19	■■■□□ 2.9
POLR1D-208	ENST00000626064	TMEM2	Q9UHN6	1383 aa		33.19	■■■□□ 2.9
POLR1D-208	ENST00000626064	CLSPN	Q9HAW4	1339 aa		33.16	■■■□□ 2.9
POLR1D-208	ENST00000626064	RPGRIP1L	Q68CZ1	1315 aa		33.12	■■■□□ 2.89
POLR1D-208	ENST00000626064	ANKLE2	Q86XL3	938 aa		33.12	■■■□□ 2.89
POLR1D-208	ENST00000626064	ZFYVE9	O95405	1425 aa		33.11	■■■□□ 2.89
POLR1D-208	ENST00000626064	STRC	Q7RTU9	1775 aa		33.11	■■■□□ 2.89
POLR1D-208	ENST00000626064	HDGF	P51858	240 aa	Known RBP	33.11	■■■□□ 2.89
POLR1D-208	ENST00000626064	SIN3A	Q96ST3	1273 aa		33.1	■■■□□ 2.89
POLR1D-208	ENST00000626064	LTK	P29376	864 aa		33.09	■■■□□ 2.89
POLR1D-208	ENST00000626064	RIMS2	Q9UQ26	1411 aa		33.09	■■■□□ 2.89

Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms