RNA–Protein interactions for RNA: ENST00000626000.1

SNRPA1-216, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 5 BASIC

Gene SNRPA1, Length 539 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-216ENST00000626000 GGT6Q6P531 493 aa21.37■■□□□ 1.01
SNRPA1-216ENST00000626000 KDM5DQ9BY66 1539 aa21.36■■□□□ 1.01
SNRPA1-216ENST00000626000 PPARGC1BQ86YN6 1023 aaKnown RBP21.36■■□□□ 1.01
SNRPA1-216ENST00000626000 ROCK1Q13464 1354 aa21.36■■□□□ 1.01
SNRPA1-216ENST00000626000 ZC3H13Q5T200 1668 aaKnown RBP21.35■■□□□ 1.01
SNRPA1-216ENST00000626000 C3P01024 1663 aa21.34■■□□□ 1.01
SNRPA1-216ENST00000626000 SETD1BQ9UPS6 1966 aaKnown RBP21.34■■□□□ 1.01
SNRPA1-216ENST00000626000 NPATQ14207 1427 aa21.33■■□□□ 1.01
SNRPA1-216ENST00000626000 RRP7BPQ9NSQ0 103 aa21.33■■□□□ 1.01
SNRPA1-216ENST00000626000 CLTCQ00610 1675 aaKnown RBP21.33■■□□□ 1
SNRPA1-216ENST00000626000 CHIC2Q9UKJ5 165 aa21.3■■□□□ 1
SNRPA1-216ENST00000626000 ZMYM3Q14202 1370 aa21.3■■□□□ 1
SNRPA1-216ENST00000626000 WASHC2CQ9Y4E1 1318 aa21.29■■□□□ 1
SNRPA1-216ENST00000626000 PREX1Q8TCU6 1659 aa21.29■■□□□ 1
SNRPA1-216ENST00000626000 DEPDC5O75140 1603 aa21.29■■□□□ 1
SNRPA1-216ENST00000626000 PRDM15P57071 1507 aaPredicted RBP21.29■■□□□ 1
SNRPA1-216ENST00000626000 KANK1Q14678 1352 aa21.28■■□□□ 1
SNRPA1-216ENST00000626000 ANKRD50Q9ULJ7 1429 aa21.27■■□□□ 1
SNRPA1-216ENST00000626000 UHRF1BP1Q6BDS2 1440 aa21.26■□□□□ 0.99
SNRPA1-216ENST00000626000 MROH1Q8NDA8 1641 aa21.25■□□□□ 0.99
SNRPA1-216ENST00000626000 PLPPR3Q6T4P5 718 aa21.24■□□□□ 0.99
SNRPA1-216ENST00000626000 PZPP20742 1482 aa21.24■□□□□ 0.99
SNRPA1-216ENST00000626000 ABCC3O15438 1527 aa21.24■□□□□ 0.99
SNRPA1-216ENST00000626000 PTPRKQ15262 1439 aa21.23■□□□□ 0.99
SNRPA1-216ENST00000626000 CEBPAP49715 358 aaPredicted RBP21.23■□□□□ 0.99
SNRPA1-216ENST00000626000 LMTK3Q96Q04 1460 aa21.23■□□□□ 0.99
SNRPA1-216ENST00000626000 ITGAEP38570 1179 aa21.2■□□□□ 0.98
SNRPA1-216ENST00000626000 CAMSAP1Q5T5Y3 1602 aa21.18■□□□□ 0.98
SNRPA1-216ENST00000626000 ARHGAP31Q2M1Z3 1444 aa21.18■□□□□ 0.98
SNRPA1-216ENST00000626000 LMTK2Q8IWU2 1503 aa21.18■□□□□ 0.98
SNRPA1-216ENST00000626000 VWDEQ8N2E2 1590 aa21.17■□□□□ 0.98
SNRPA1-216ENST00000626000 CEP152O94986 1710 aa21.17■□□□□ 0.98
SNRPA1-216ENST00000626000 UNC13BO14795 1591 aa21.16■□□□□ 0.98
SNRPA1-216ENST00000626000 ZNF142P52746 1687 aaPredicted RBP21.14■□□□□ 0.97
SNRPA1-216ENST00000626000 GCC2Q8IWJ2 1684 aa21.14■□□□□ 0.97
SNRPA1-216ENST00000626000 MYO3AQ8NEV4 1616 aa21.14■□□□□ 0.97
SNRPA1-216ENST00000626000 GRWD1Q9BQ67 446 aaKnown RBP eCLIP21.13■□□□□ 0.972e-7■□□□□ 8
SNRPA1-216ENST00000626000 TNRQ92752 1358 aa21.12■□□□□ 0.97
SNRPA1-216ENST00000626000 NLRP1Q9C000 1473 aa21.12■□□□□ 0.97
SNRPA1-216ENST00000626000 HFM1A2PYH4 1435 aa21.12■□□□□ 0.97
SNRPA1-216ENST00000626000 SPATA31D1Q6ZQQ2 1576 aa21.11■□□□□ 0.97
SNRPA1-216ENST00000626000 ACIN1Q9UKV3 1341 aaKnown RBP21.11■□□□□ 0.97
SNRPA1-216ENST00000626000 RPRD2Q5VT52 1461 aaKnown RBP21.11■□□□□ 0.97
SNRPA1-216ENST00000626000 CEP170BQ9Y4F5 1589 aaPredicted RBP21.1■□□□□ 0.97
SNRPA1-216ENST00000626000 EFCAB6Q5THR3 1501 aa21.09■□□□□ 0.97
SNRPA1-216ENST00000626000 ERVK-7P63135 1459 aa21.09■□□□□ 0.97
SNRPA1-216ENST00000626000 TET3O43151 1660 aa21.09■□□□□ 0.97
SNRPA1-216ENST00000626000 A2ML1A8K2U0 1454 aa21.08■□□□□ 0.97
SNRPA1-216ENST00000626000 NAIPQ13075 1403 aa21.08■□□□□ 0.97
SNRPA1-216ENST00000626000 IQGAP3Q86VI3 1631 aa21.07■□□□□ 0.96
SNRPA1-216ENST00000626000 FBXO31Q5XUX0 539 aaPredicted RBP21.04■□□□□ 0.96
SNRPA1-216ENST00000626000 DMRT2Q9Y5R5 561 aa21.04■□□□□ 0.96
SNRPA1-216ENST00000626000 PLA2R1Q13018 1463 aa21.04■□□□□ 0.96
SNRPA1-216ENST00000626000 NUP155O75694 1391 aa21.02■□□□□ 0.96
SNRPA1-216ENST00000626000 HSPA2P54652 639 aa21.02■□□□□ 0.96
SNRPA1-216ENST00000626000 UGGT1Q9NYU2 1555 aa20.99■□□□□ 0.95
SNRPA1-216ENST00000626000 THEMISQ8N1K5 641 aaPredicted RBP20.98■□□□□ 0.95
SNRPA1-216ENST00000626000 KDM5AP29375 1690 aaKnown RBP20.98■□□□□ 0.95
SNRPA1-216ENST00000626000 NOS1P29475 1434 aa20.97■□□□□ 0.95
SNRPA1-216ENST00000626000 CFAP65Q6ZU64 1925 aaKnown RBP20.96■□□□□ 0.95
SNRPA1-216ENST00000626000 PKD2Q13563 968 aa20.96■□□□□ 0.95
SNRPA1-216ENST00000626000 SLC52A1Q9NWF4 448 aa20.96■□□□□ 0.95
SNRPA1-216ENST00000626000 PTPRTO14522 1441 aa20.94■□□□□ 0.94
SNRPA1-216ENST00000626000 E9PCH4 1651 aa20.93■□□□□ 0.94
SNRPA1-216ENST00000626000 STRCQ7RTU9 1775 aa20.93■□□□□ 0.94
SNRPA1-216ENST00000626000 SYNMO15061 1565 aa20.91■□□□□ 0.94
SNRPA1-216ENST00000626000 ILDR1Q86SU0 546 aaPredicted RBP20.91■□□□□ 0.94
SNRPA1-216ENST00000626000 POLR1AO95602 1720 aaPredicted RBP20.9■□□□□ 0.94
SNRPA1-216ENST00000626000 UBR1Q8IWV7 1749 aa20.9■□□□□ 0.94
SNRPA1-216ENST00000626000 SETD5Q9C0A6 1442 aa20.9■□□□□ 0.94
SNRPA1-216ENST00000626000 TRIM52Q96A61 297 aa20.89■□□□□ 0.93
SNRPA1-216ENST00000626000 ANKLE2Q86XL3 938 aa20.88■□□□□ 0.93
SNRPA1-216ENST00000626000 STAG3Q9UJ98 1225 aa20.88■□□□□ 0.93
SNRPA1-216ENST00000626000 PIK3C2BO00750 1634 aa20.88■□□□□ 0.93
SNRPA1-216ENST00000626000 ADGRB3O60242 1522 aa20.86■□□□□ 0.93
SNRPA1-216ENST00000626000 SPHKAPQ2M3C7 1700 aa20.86■□□□□ 0.93
SNRPA1-216ENST00000626000 SLIT1O75093 1534 aa20.85■□□□□ 0.93
SNRPA1-216ENST00000626000 IDI1Q13907 227 aa20.84■□□□□ 0.93
SNRPA1-216ENST00000626000 SLC4A1APQ9BWU0 796 aaKnown RBP20.83■□□□□ 0.93
SNRPA1-216ENST00000626000 MED14O60244 1454 aa20.82■□□□□ 0.92
SNRPA1-216ENST00000626000 ARHGAP23Q9P227 1491 aa20.82■□□□□ 0.92
SNRPA1-216ENST00000626000 HRCP23327 699 aa20.82■□□□□ 0.92
SNRPA1-216ENST00000626000 EID1Q9Y6B2 187 aa20.82■□□□□ 0.92
SNRPA1-216ENST00000626000 HDGFP51858 240 aaKnown RBP20.81■□□□□ 0.92
SNRPA1-216ENST00000626000 TRPM2O94759 1503 aa20.81■□□□□ 0.92
SNRPA1-216ENST00000626000 SCAF11Q99590 1463 aaKnown RBP20.81■□□□□ 0.92
SNRPA1-216ENST00000626000 TMEM2Q9UHN6 1383 aa20.8■□□□□ 0.92
SNRPA1-216ENST00000626000 NCKAP5LQ9HCH0 1330 aa20.79■□□□□ 0.92
SNRPA1-216ENST00000626000 RAB3GAP2Q9H2M9 1393 aa20.79■□□□□ 0.92
SNRPA1-216ENST00000626000 NEURL4Q96JN8 1562 aa20.78■□□□□ 0.92
SNRPA1-216ENST00000626000 NPHP4O75161 1426 aaPredicted RBP20.78■□□□□ 0.92
SNRPA1-216ENST00000626000 TMEM131LA2VDJ0 1609 aa20.77■□□□□ 0.92
SNRPA1-216ENST00000626000 IQGAP1P46940 1657 aa20.77■□□□□ 0.91
SNRPA1-216ENST00000626000 FBXO41Q8TF61 875 aa20.75■□□□□ 0.91
SNRPA1-216ENST00000626000 TXNDC2Q86VQ3 553 aa20.74■□□□□ 0.91
SNRPA1-216ENST00000626000 ABCF1Q8NE71 845 aaKnown RBP eCLIP20.74■□□□□ 0.91
SNRPA1-216ENST00000626000 MPHOSPH9Q99550 1183 aa20.74■□□□□ 0.91
SNRPA1-216ENST00000626000 KIF1BO60333 1816 aa20.71■□□□□ 0.91
SNRPA1-216ENST00000626000 CHGAP10645 457 aaKnown RBP20.7■□□□□ 0.9
SNRPA1-216ENST00000626000 MYO5BQ9ULV0 1848 aa20.69■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms