RNA–Protein interactions for RNA: ENST00000625905.1

NELFE-214, Transcript of negative elongation factor complex member E, humanhuman

TSL 5 BASIC

Gene NELFE, Length 111 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NELFE-214ENST00000625905 PLPPR3Q6T4P5 718 aa14.12□□□□□ -0.15
NELFE-214ENST00000625905 GGT6Q6P531 493 aa14.11□□□□□ -0.15
NELFE-214ENST00000625905 CHIC2Q9UKJ5 165 aa14.11□□□□□ -0.15
NELFE-214ENST00000625905 NCOA1Q15788 1441 aa14.1□□□□□ -0.15
NELFE-214ENST00000625905 RRP7BPQ9NSQ0 103 aa14.1□□□□□ -0.15
NELFE-214ENST00000625905 ZC3H13Q5T200 1668 aaKnown RBP14.1□□□□□ -0.15
NELFE-214ENST00000625905 MROH1Q8NDA8 1641 aa14.09□□□□□ -0.15
NELFE-214ENST00000625905 PRDM15P57071 1507 aaPredicted RBP14.09□□□□□ -0.15
NELFE-214ENST00000625905 PTPRKQ15262 1439 aa14.08□□□□□ -0.15
NELFE-214ENST00000625905 DEPDC5O75140 1603 aa14.08□□□□□ -0.16
NELFE-214ENST00000625905 PPP6R1Q9UPN7 881 aa14.07□□□□□ -0.16
NELFE-214ENST00000625905 PREX1Q8TCU6 1659 aa14.07□□□□□ -0.16
NELFE-214ENST00000625905 ROCK1Q13464 1354 aa14.07□□□□□ -0.16
NELFE-214ENST00000625905 ABCC3O15438 1527 aa14.06□□□□□ -0.16
NELFE-214ENST00000625905 ITGAEP38570 1179 aa14.06□□□□□ -0.16
NELFE-214ENST00000625905 LMTK3Q96Q04 1460 aa14.06□□□□□ -0.16
NELFE-214ENST00000625905 CEBPAP49715 358 aaPredicted RBP14.05□□□□□ -0.16
NELFE-214ENST00000625905 ZMYM3Q14202 1370 aa14.05□□□□□ -0.16
NELFE-214ENST00000625905 ANKRD50Q9ULJ7 1429 aa14.05□□□□□ -0.16
NELFE-214ENST00000625905 CEP152O94986 1710 aa14.04□□□□□ -0.16
NELFE-214ENST00000625905 NPATQ14207 1427 aa14.04□□□□□ -0.16
NELFE-214ENST00000625905 CAMSAP1Q5T5Y3 1602 aa14.04□□□□□ -0.16
NELFE-214ENST00000625905 WASHC2CQ9Y4E1 1318 aa14.03□□□□□ -0.16
NELFE-214ENST00000625905 MYO3AQ8NEV4 1616 aa14.02□□□□□ -0.16
NELFE-214ENST00000625905 PZPP20742 1482 aa14.02□□□□□ -0.16
NELFE-214ENST00000625905 UHRF1BP1Q6BDS2 1440 aa14.02□□□□□ -0.16
NELFE-214ENST00000625905 GCC2Q8IWJ2 1684 aa14.01□□□□□ -0.17
NELFE-214ENST00000625905 UNC13BO14795 1591 aa14.01□□□□□ -0.17
NELFE-214ENST00000625905 KANK1Q14678 1352 aa14.01□□□□□ -0.17
NELFE-214ENST00000625905 VWDEQ8N2E2 1590 aa14□□□□□ -0.17
NELFE-214ENST00000625905 ZNF142P52746 1687 aaPredicted RBP13.98□□□□□ -0.17
NELFE-214ENST00000625905 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.98□□□□□ -0.178e-7■■□□□ 12.3
NELFE-214ENST00000625905 LMTK2Q8IWU2 1503 aa13.98□□□□□ -0.17
NELFE-214ENST00000625905 SETD1BQ9UPS6 1966 aaKnown RBP13.98□□□□□ -0.17
NELFE-214ENST00000625905 EFCAB6Q5THR3 1501 aa13.96□□□□□ -0.17
NELFE-214ENST00000625905 SPATA31D1Q6ZQQ2 1576 aa13.96□□□□□ -0.18
NELFE-214ENST00000625905 CEP170BQ9Y4F5 1589 aaPredicted RBP13.96□□□□□ -0.18
NELFE-214ENST00000625905 ERVK-7P63135 1459 aa13.95□□□□□ -0.18
NELFE-214ENST00000625905 HFM1A2PYH4 1435 aa13.95□□□□□ -0.18
NELFE-214ENST00000625905 TNRQ92752 1358 aa13.95□□□□□ -0.18
NELFE-214ENST00000625905 IQGAP3Q86VI3 1631 aa13.94□□□□□ -0.18
NELFE-214ENST00000625905 NAIPQ13075 1403 aa13.94□□□□□ -0.18
NELFE-214ENST00000625905 ARHGAP31Q2M1Z3 1444 aa13.94□□□□□ -0.18
NELFE-214ENST00000625905 TET3O43151 1660 aa13.94□□□□□ -0.18
NELFE-214ENST00000625905 HSPA2P54652 639 aa13.93□□□□□ -0.18
NELFE-214ENST00000625905 FBXO31Q5XUX0 539 aaPredicted RBP13.92□□□□□ -0.18
NELFE-214ENST00000625905 A2ML1A8K2U0 1454 aa13.92□□□□□ -0.18
NELFE-214ENST00000625905 NLRP1Q9C000 1473 aa13.92□□□□□ -0.18
NELFE-214ENST00000625905 RPRD2Q5VT52 1461 aaKnown RBP13.9□□□□□ -0.18
NELFE-214ENST00000625905 NUP155O75694 1391 aa13.88□□□□□ -0.19
NELFE-214ENST00000625905 CFAP65Q6ZU64 1925 aaKnown RBP13.87□□□□□ -0.19
NELFE-214ENST00000625905 E9PCH4 1651 aa13.87□□□□□ -0.19
NELFE-214ENST00000625905 SYNMO15061 1565 aa13.87□□□□□ -0.19
NELFE-214ENST00000625905 UGGT1Q9NYU2 1555 aa13.86□□□□□ -0.19
NELFE-214ENST00000625905 PLA2R1Q13018 1463 aa13.86□□□□□ -0.19
NELFE-214ENST00000625905 STRCQ7RTU9 1775 aa13.85□□□□□ -0.19
NELFE-214ENST00000625905 NOS1P29475 1434 aa13.84□□□□□ -0.19
NELFE-214ENST00000625905 PHF23Q9BUL5 403 aaPredicted RBP13.84□□□□□ -0.19
NELFE-214ENST00000625905 PIK3C2BO00750 1634 aa13.83□□□□□ -0.2
NELFE-214ENST00000625905 UBR1Q8IWV7 1749 aa13.83□□□□□ -0.2
NELFE-214ENST00000625905 POLR1AO95602 1720 aaPredicted RBP13.82□□□□□ -0.2
NELFE-214ENST00000625905 ADGRB3O60242 1522 aa13.81□□□□□ -0.2
NELFE-214ENST00000625905 KDM5AP29375 1690 aaKnown RBP13.81□□□□□ -0.2
NELFE-214ENST00000625905 SPHKAPQ2M3C7 1700 aa13.81□□□□□ -0.2
NELFE-214ENST00000625905 TRIM52Q96A61 297 aa13.8□□□□□ -0.2
NELFE-214ENST00000625905 SETD5Q9C0A6 1442 aa13.8□□□□□ -0.2
NELFE-214ENST00000625905 THEMISQ8N1K5 641 aaPredicted RBP13.78□□□□□ -0.2
NELFE-214ENST00000625905 PTPRTO14522 1441 aa13.78□□□□□ -0.2
NELFE-214ENST00000625905 NEURL4Q96JN8 1562 aa13.78□□□□□ -0.2
NELFE-214ENST00000625905 PKD2Q13563 968 aa13.77□□□□□ -0.21
NELFE-214ENST00000625905 DMRT2Q9Y5R5 561 aa13.77□□□□□ -0.21
NELFE-214ENST00000625905 SLIT1O75093 1534 aa13.76□□□□□ -0.21
NELFE-214ENST00000625905 TRPM2O94759 1503 aa13.76□□□□□ -0.21
NELFE-214ENST00000625905 RAB3GAP2Q9H2M9 1393 aa13.76□□□□□ -0.21
NELFE-214ENST00000625905 NCKAP5LQ9HCH0 1330 aa13.76□□□□□ -0.21
NELFE-214ENST00000625905 SLC52A1Q9NWF4 448 aa13.76□□□□□ -0.21
NELFE-214ENST00000625905 STAG3Q9UJ98 1225 aa13.76□□□□□ -0.21
NELFE-214ENST00000625905 SCAF11Q99590 1463 aaKnown RBP13.74□□□□□ -0.21
NELFE-214ENST00000625905 ARHGAP23Q9P227 1491 aa13.74□□□□□ -0.21
NELFE-214ENST00000625905 ACIN1Q9UKV3 1341 aaKnown RBP13.74□□□□□ -0.21
NELFE-214ENST00000625905 IDI1Q13907 227 aa13.74□□□□□ -0.21
NELFE-214ENST00000625905 SLC4A1APQ9BWU0 796 aaKnown RBP13.74□□□□□ -0.21
NELFE-214ENST00000625905 TMEM131LA2VDJ0 1609 aa13.74□□□□□ -0.21
NELFE-214ENST00000625905 TMEM2Q9UHN6 1383 aa13.73□□□□□ -0.21
NELFE-214ENST00000625905 IQGAP1P46940 1657 aa13.73□□□□□ -0.21
NELFE-214ENST00000625905 CLTCL1P53675 1640 aa13.73□□□□□ -0.21
NELFE-214ENST00000625905 ANKLE2Q86XL3 938 aa13.73□□□□□ -0.21
NELFE-214ENST00000625905 MYO5BQ9ULV0 1848 aa13.72□□□□□ -0.21
NELFE-214ENST00000625905 MED14O60244 1454 aa13.72□□□□□ -0.21
NELFE-214ENST00000625905 NPHP4O75161 1426 aaPredicted RBP13.72□□□□□ -0.21
NELFE-214ENST00000625905 CHGAP10645 457 aaKnown RBP13.69□□□□□ -0.22
NELFE-214ENST00000625905 EID1Q9Y6B2 187 aa13.69□□□□□ -0.22
NELFE-214ENST00000625905 MPHOSPH9Q99550 1183 aa13.68□□□□□ -0.22
NELFE-214ENST00000625905 KIF1BO60333 1816 aa13.67□□□□□ -0.22
NELFE-214ENST00000625905 ZFYVE9O95405 1425 aa13.67□□□□□ -0.22
NELFE-214ENST00000625905 RIMS2Q9UQ26 1411 aa13.67□□□□□ -0.22
NELFE-214ENST00000625905 TXNDC2Q86VQ3 553 aa13.67□□□□□ -0.22
NELFE-214ENST00000625905 FOXD1Q16676 465 aa13.66□□□□□ -0.22
NELFE-214ENST00000625905 CCDC144AA2RUR9 1427 aa13.65□□□□□ -0.22
NELFE-214ENST00000625905 LTKP29376 864 aa13.65□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 103.3 ms